RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ABCB11O95342 1321 aa15.59■□□□□ 0.09
NUDCD3-201ENST00000338427 MROH7Q68CQ1 1323 aa15.59■□□□□ 0.09
NUDCD3-201ENST00000338427 BAZ2BQ9UIF8 2168 aaKnown RBP15.59■□□□□ 0.09
NUDCD3-201ENST00000338427 LAMA4Q16363 1823 aa15.59■□□□□ 0.09
NUDCD3-201ENST00000338427 EIF2AK2P19525 551 aaKnown RBP15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 PBX2P40425 430 aa15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 SMAD3P84022 425 aaKnown RBP15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 PURAQ00577 322 aaKnown RBP15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 NBPF20Q3BBV1 942 aa15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 CCDC62Q6P9F0 684 aa15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 MYLIPQ8WY64 445 aa15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 MAP4K1Q92918 833 aa15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 MTMR8Q96EF0 704 aa15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 SCLYQ96I15 445 aa15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 PIGSQ96S52 555 aa15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 RMDN3Q96TC7 470 aa15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 NOC4LQ9BVI4 516 aaKnown RBP15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 HIPK3Q9H422 1215 aa15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 CXXC1Q9P0U4 656 aaPredicted RBP15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 PNMA2Q9UL42 364 aa15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 MRPL11Q9Y3B7 192 aaKnown RBP15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 U3KPZ7 1027 aaPredicted RBP15.58■□□□□ 0.08
NUDCD3-201ENST00000338427 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 CYTH3O43739 400 aa15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 SORBS3O60504 671 aa15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 HOXA13P31271 388 aaPredicted RBP15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 TRDNQ13061 729 aa15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 PPIGQ13427 754 aaKnown RBP eCLIP15.57■□□□□ 0.087e-6■□□□□ 9.9
NUDCD3-201ENST00000338427 PPP2R5BQ15173 497 aa15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 HOMER1Q86YM7 354 aa15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 TMEM199Q8N511 208 aa15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 IGDCC4Q8TDY8 1250 aa15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 SCFD2Q8WU76 684 aa15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 AFG1LQ8WV93 481 aa15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 WNT8AQ9H1J5 351 aa15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 ALDH8A1Q9H2A2 487 aaPredicted RBP15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 RBM8AQ9Y5S9 174 aaKnown RBP15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 RAD50Q92878 1312 aa15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 A0A0C4DFX4 3053 aa15.57■□□□□ 0.08
NUDCD3-201ENST00000338427 LOC102724159A0A0B4J2E5 919 aa15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 MYCLP12524 364 aaPredicted RBP15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 NT5C2P49902 561 aa15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 GRM4Q14833 912 aa15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 GRIN2CQ14957 1233 aa15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 WTAPQ15007 396 aa15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 PWP2Q15269 919 aaKnown RBP15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 FAM47CQ5HY64 1035 aa15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 ARHGEF16Q5VV41 709 aa15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 NSUN6Q8TEA1 469 aaKnown RBP15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 MTG1Q9BT17 334 aaPredicted RBP15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 MYL10Q9BUA6 226 aa15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 AMNQ9BXJ7 453 aa15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 IL23AQ9NPF7 189 aa15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 POLR3EQ9NVU0 708 aa15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 PCDHA1Q9Y5I3 950 aa15.56■□□□□ 0.08
NUDCD3-201ENST00000338427 A6NJR5 290 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 DLL1O00548 723 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 FGBP02675 491 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 NR3C2P08235 984 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 CPT1AP50416 773 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 TROAPQ12815 778 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 TTLL4Q14679 1199 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 STXBP2Q15833 593 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 TMEM67Q5HYA8 995 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 RASIP1Q5U651 963 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 OTOP2Q7RTS6 562 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 MCF2L2Q86YR7 1114 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 MB21D2Q8IYB1 491 aaPredicted RBP15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 NCOA7Q8NI08 942 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 IL31RAQ8NI17 732 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 LSG1Q9H089 658 aaKnown RBP15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 BCAS3Q9H6U6 928 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 RIOX1Q9H6W3 641 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 PXMP2Q9NR77 195 aa15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 DDX41Q9UJV9 622 aaKnown RBP15.55■□□□□ 0.08
NUDCD3-201ENST00000338427 ZBTB5O15062 677 aa15.54■□□□□ 0.08
NUDCD3-201ENST00000338427 RGS20O76081 388 aa15.54■□□□□ 0.08
NUDCD3-201ENST00000338427 HSD17B4P51659 736 aa15.54■□□□□ 0.08
NUDCD3-201ENST00000338427 ARHGAP1Q07960 439 aa15.54■□□□□ 0.08
NUDCD3-201ENST00000338427 RALYLQ86SE5 291 aaKnown RBP15.54■□□□□ 0.08
NUDCD3-201ENST00000338427 FCHSD1Q86WN1 690 aa15.54■□□□□ 0.08
NUDCD3-201ENST00000338427 RAB11FIP4Q86YS3 637 aa15.54■□□□□ 0.08
NUDCD3-201ENST00000338427 GPKOWQ92917 476 aaPredicted RBP eCLIP15.54■□□□□ 0.08
NUDCD3-201ENST00000338427 MPHOSPH6Q99547 160 aaKnown RBP15.54■□□□□ 0.08
NUDCD3-201ENST00000338427 MYH6P13533 1939 aa15.54■□□□□ 0.08
NUDCD3-201ENST00000338427 B4DLN1 442 aa15.53■□□□□ 0.08
NUDCD3-201ENST00000338427 NKRFO15226 690 aaKnown RBP eCLIP15.53■□□□□ 0.08
NUDCD3-201ENST00000338427 DNAJB2P25686 324 aa15.53■□□□□ 0.08
NUDCD3-201ENST00000338427 MRPL12P52815 198 aaKnown RBP15.53■□□□□ 0.08
NUDCD3-201ENST00000338427 SP2Q02086 613 aa15.53■□□□□ 0.08
NUDCD3-201ENST00000338427 DEFB128Q7Z7B8 93 aa15.53■□□□□ 0.08
NUDCD3-201ENST00000338427 CMTR1Q8N1G2 835 aaKnown RBP15.53■□□□□ 0.08
NUDCD3-201ENST00000338427 KAT2BQ92831 832 aa15.53■□□□□ 0.08
NUDCD3-201ENST00000338427 IWS1Q96ST2 819 aa15.53■□□□□ 0.08
NUDCD3-201ENST00000338427 LRRC2Q9BYS8 371 aa15.53■□□□□ 0.08
NUDCD3-201ENST00000338427 PBX4Q9BYU1 374 aa15.53■□□□□ 0.08
NUDCD3-201ENST00000338427 ERICH2A1L162 156 aa15.52■□□□□ 0.08
NUDCD3-201ENST00000338427 SLC27A2O14975 620 aa15.52■□□□□ 0.08
NUDCD3-201ENST00000338427 EIF3JO75822 258 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms