RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 TMTC3Q6ZXV5 915 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 COPS5Q92905 334 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 USP26Q9BXU7 913 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 PXMP2Q9NR77 195 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 CALM1P0DP23 149 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 CALM2P0DP24 149 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 CALM3P0DP25 149 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 MAGEA10P43363 369 aaPredicted RBP17.28■□□□□ 0.36
KATNA1-201ENST00000335643 C1orf53Q5VUE5 145 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 SH3RF1Q7Z6J0 888 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 IL31RAQ8NI17 732 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 NSUN6Q8TEA1 469 aaKnown RBP17.28■□□□□ 0.36
KATNA1-201ENST00000335643 GDF15Q99988 308 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 MAF1Q9H063 256 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 KLF18A0A0U1RQI7 1052 aa17.27■□□□□ 0.35
KATNA1-201ENST00000335643 SMARCA1P28370 1054 aa17.27■□□□□ 0.35
KATNA1-201ENST00000335643 TLE2Q04725 743 aa17.27■□□□□ 0.35
KATNA1-201ENST00000335643 FSCN1Q16658 493 aaKnown RBP17.27■□□□□ 0.35
KATNA1-201ENST00000335643 Q6ZUG5 572 aa17.27■□□□□ 0.35
KATNA1-201ENST00000335643 RRP36Q96EU6 259 aaKnown RBP17.27■□□□□ 0.35
KATNA1-201ENST00000335643 STARD7Q9NQZ5 370 aa17.27■□□□□ 0.35
KATNA1-201ENST00000335643 FAM217BQ9NTX9 383 aaPredicted RBP17.27■□□□□ 0.35
KATNA1-201ENST00000335643 CNTNAP5Q8WYK1 1306 aa17.26■□□□□ 0.35
KATNA1-201ENST00000335643 HMGB1P09429 215 aaKnown RBP17.26■□□□□ 0.35
KATNA1-201ENST00000335643 CDC27P30260 824 aa17.26■□□□□ 0.35
KATNA1-201ENST00000335643 APOBRQ0VD83 1088 aa17.26■□□□□ 0.35
KATNA1-201ENST00000335643 FUT2Q10981 343 aa17.26■□□□□ 0.35
KATNA1-201ENST00000335643 ARHGEF16Q5VV41 709 aa17.26■□□□□ 0.35
KATNA1-201ENST00000335643 CXCL17Q6UXB2 119 aa17.26■□□□□ 0.35
KATNA1-201ENST00000335643 PCSK9Q8NBP7 692 aaKnown RBP17.26■□□□□ 0.35
KATNA1-201ENST00000335643 ZFP91Q96JP5 570 aaPredicted RBP17.26■□□□□ 0.35
KATNA1-201ENST00000335643 LZTS2Q9BRK4 669 aa17.26■□□□□ 0.35
KATNA1-201ENST00000335643 PDCD2LQ9BRP1 358 aa17.26■□□□□ 0.35
KATNA1-201ENST00000335643 SPC25Q9HBM1 224 aa17.26■□□□□ 0.35
KATNA1-201ENST00000335643 PDLIM7Q9NR12 457 aa17.26■□□□□ 0.35
KATNA1-201ENST00000335643 TRIM43BA6NCK2 446 aa17.25■□□□□ 0.35
KATNA1-201ENST00000335643 ZBTB43O43298 467 aa17.25■□□□□ 0.35
KATNA1-201ENST00000335643 RGS20O76081 388 aa17.25■□□□□ 0.35
KATNA1-201ENST00000335643 NR3C2P08235 984 aa17.25■□□□□ 0.35
KATNA1-201ENST00000335643 CASTP20810 708 aaKnown RBP17.25■□□□□ 0.35
KATNA1-201ENST00000335643 RPS6KB1P23443 525 aa17.25■□□□□ 0.35
KATNA1-201ENST00000335643 GNAQP50148 359 aa17.25■□□□□ 0.35
KATNA1-201ENST00000335643 MDM2Q00987 491 aaPredicted RBP17.25■□□□□ 0.35
KATNA1-201ENST00000335643 CCDC62Q6P9F0 684 aa17.25■□□□□ 0.35
KATNA1-201ENST00000335643 BLOC1S2Q6QNY1 142 aa17.25■□□□□ 0.35
KATNA1-201ENST00000335643 FCHSD1Q86WN1 690 aa17.25■□□□□ 0.35
KATNA1-201ENST00000335643 BRF1Q92994 677 aa17.25■□□□□ 0.35
KATNA1-201ENST00000335643 TRIM43Q96BQ3 446 aaPredicted RBP17.25■□□□□ 0.35
KATNA1-201ENST00000335643 IWS1Q96ST2 819 aa17.25■□□□□ 0.35
KATNA1-201ENST00000335643 Q9Y3F1 56 aa17.25■□□□□ 0.35
KATNA1-201ENST00000335643 GCOM1H8Y6P7 765 aaPredicted RBP17.24■□□□□ 0.35
KATNA1-201ENST00000335643 PQBP1O60828 265 aaKnown RBP17.24■□□□□ 0.35
KATNA1-201ENST00000335643 POLR2MP0CAP2 368 aa17.24■□□□□ 0.35
KATNA1-201ENST00000335643 TXNP10599 105 aaKnown RBP17.24■□□□□ 0.35
KATNA1-201ENST00000335643 ITGB8P26012 769 aa17.24■□□□□ 0.35
KATNA1-201ENST00000335643 PGM5Q15124 567 aa17.24■□□□□ 0.35
KATNA1-201ENST00000335643 PPP2R5BQ15173 497 aa17.24■□□□□ 0.35
KATNA1-201ENST00000335643 STXBP2Q15833 593 aa17.24■□□□□ 0.35
KATNA1-201ENST00000335643 LY6KQ17RY6 165 aa17.24■□□□□ 0.35
KATNA1-201ENST00000335643 USP17L6PQ6QN14 398 aa17.24■□□□□ 0.35
KATNA1-201ENST00000335643 SEPT14Q6ZU15 432 aa17.24■□□□□ 0.35
KATNA1-201ENST00000335643 SCFD2Q8WU76 684 aa17.24■□□□□ 0.35
KATNA1-201ENST00000335643 GPKOWQ92917 476 aaPredicted RBP eCLIP17.24■□□□□ 0.35
KATNA1-201ENST00000335643 GLT1D1Q96MS3 346 aa17.24■□□□□ 0.35
KATNA1-201ENST00000335643 AGXT2Q9BYV1 514 aa17.24■□□□□ 0.35
KATNA1-201ENST00000335643 AP5M1Q9H0R1 490 aa17.24■□□□□ 0.35
KATNA1-201ENST00000335643 MAP3K20Q9NYL2 800 aaKnown RBP17.24■□□□□ 0.35
KATNA1-201ENST00000335643 GRIN2DO15399 1336 aa17.24■□□□□ 0.35
KATNA1-201ENST00000335643 MEIS2O14770 477 aa17.23■□□□□ 0.35
KATNA1-201ENST00000335643 RTN1Q16799 776 aa17.23■□□□□ 0.35
KATNA1-201ENST00000335643 TYW1BQ6NUM6 668 aa17.23■□□□□ 0.35
KATNA1-201ENST00000335643 SYNE3Q6ZMZ3 975 aa17.23■□□□□ 0.35
KATNA1-201ENST00000335643 MPHOSPH6Q99547 160 aaKnown RBP17.23■□□□□ 0.35
KATNA1-201ENST00000335643 PRDM5Q9NQX1 630 aaPredicted RBP17.23■□□□□ 0.35
KATNA1-201ENST00000335643 SEC63Q9UGP8 760 aaKnown RBP17.23■□□□□ 0.35
KATNA1-201ENST00000335643 ELP1O95163 1332 aa17.23■□□□□ 0.35
KATNA1-201ENST00000335643 GOLGA8AA7E2F4 631 aa17.23■□□□□ 0.35
KATNA1-201ENST00000335643 GOLGA8BA8MQT2 603 aa17.23■□□□□ 0.35
KATNA1-201ENST00000335643 EPB41L2O43491 1005 aaKnown RBP17.23■□□□□ 0.35
KATNA1-201ENST00000335643 MYCLP12524 364 aaPredicted RBP17.23■□□□□ 0.35
KATNA1-201ENST00000335643 ADD1P35611 737 aaKnown RBP17.23■□□□□ 0.35
KATNA1-201ENST00000335643 CDK7P50613 346 aa17.23■□□□□ 0.35
KATNA1-201ENST00000335643 FXR1P51114 621 aaKnown RBP eCLIP17.23■□□□□ 0.35
KATNA1-201ENST00000335643 PSMC6P62333 389 aa17.23■□□□□ 0.35
KATNA1-201ENST00000335643 FAAP100Q0VG06 881 aa17.23■□□□□ 0.35
KATNA1-201ENST00000335643 ANKRD33Q7Z3H0 272 aa17.23■□□□□ 0.35
KATNA1-201ENST00000335643 OR6J1Q8NGC5 347 aa17.23■□□□□ 0.35
KATNA1-201ENST00000335643 FRMPD4Q14CM0 1322 aa17.22■□□□□ 0.35
KATNA1-201ENST00000335643 CDH23Q9H251 3354 aa17.22■□□□□ 0.35
KATNA1-201ENST00000335643 B4DLN1 442 aa17.22■□□□□ 0.35
KATNA1-201ENST00000335643 EIF3JO75822 258 aaKnown RBP17.22■□□□□ 0.35
KATNA1-201ENST00000335643 MRPL12P52815 198 aaKnown RBP17.22■□□□□ 0.35
KATNA1-201ENST00000335643 TRAF1Q13077 416 aa17.22■□□□□ 0.35
KATNA1-201ENST00000335643 TTLL4Q14679 1199 aa17.22■□□□□ 0.35
KATNA1-201ENST00000335643 WWC2Q6AWC2 1192 aa17.22■□□□□ 0.35
KATNA1-201ENST00000335643 VSIG10LQ86VR7 867 aa17.22■□□□□ 0.35
KATNA1-201ENST00000335643 FBXL16Q8N461 479 aa17.22■□□□□ 0.35
KATNA1-201ENST00000335643 SAMD3Q8N6K7 520 aa17.22■□□□□ 0.35
KATNA1-201ENST00000335643 PPP1R13LQ8WUF5 828 aa17.22■□□□□ 0.35
KATNA1-201ENST00000335643 ZSWIM6Q9HCJ5 1215 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms