RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 ADALQ6DHV7 355 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 PLD3Q8IV08 490 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 SLC17A8Q8NDX2 589 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 EPN1Q9Y6I3 576 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-201ENST00000335551 TMEM191CA6NGB0 347 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 MT-ND3P03897 115 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 TMEM191BP0C7N4 346 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 ABCB4P21439 1286 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 LUZP2Q86TE4 346 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 FAM81BQ96LP2 452 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 MCM9Q9NXL9 1143 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 SUN2Q9UH99 717 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 ZBTB21Q9ULJ3 1066 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 PTPN22Q9Y2R2 807 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 PCDHB15Q9Y5E8 787 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 GCC2Q8IWJ2 1684 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 SGK1O00141 431 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 DNAJC6O75061 913 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 CD19P15391 556 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 SAT1P21673 171 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 ADCY7P51828 1080 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 MYCT1Q8N699 235 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 NCLNQ969V3 563 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 ASPSCR1Q9BZE9 553 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 ZFYVE9O95405 1425 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 PLS3P13797 630 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 GUCY1A3Q02108 690 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 CASP8Q14790 479 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 MORF4L2Q15014 288 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 TTLL7Q6ZT98 887 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 TTC1Q99614 292 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 DCTPP1Q9H773 170 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 EPB41L5Q9HCM4 733 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 BPIFB4P59827 614 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 DEPDC1Q5TB30 811 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 PIK3AP1Q6ZUJ8 805 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 ACAD11Q709F0 780 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 NEK8Q86SG6 692 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 TERB1Q8NA31 727 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 PITPNM3Q9BZ71 974 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 CXorf56Q9H5V9 222 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 ARHGEF11O15085 1522 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 MAFGO15525 162 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 OCRLQ01968 901 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 ACBD5Q5T8D3 534 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 TBC1D1Q86TI0 1168 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 MBD2Q9UBB5 411 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 POLKQ9UBT6 870 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 ARMCX3Q9UH62 379 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 CAB39Q9Y376 341 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 SEC31AO94979 1220 aaKnown RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 SNRPA1P09661 255 aaKnown RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 BRDTQ58F21 947 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 PLEKHM3Q6ZWE6 761 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 NUDT16Q96DE0 195 aaKnown RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 METTL14Q9HCE5 456 aaKnown RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 KLC4Q9NSK0 619 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 ZNF148Q9UQR1 794 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 A6NJR5 290 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 F8W8V4 182 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 PTCD1O75127 700 aaKnown RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 PNOCQ13519 176 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 TLK2Q86UE8 772 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 TLK1Q9UKI8 766 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 NCF2P19878 526 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 CDC37L1Q7L3B6 337 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 ADCK1Q86TW2 530 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 MTRQ99707 1265 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 KIF9Q9HAQ2 790 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 L3MBTL1Q9Y468 752 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 TFAP4Q01664 338 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 SPOPLQ6IQ16 392 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 VTI1AQ96AJ9 217 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 GEMIN8Q9NWZ8 242 aaKnown RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 PKD2L2Q9NZM6 624 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 APOBEC2Q9Y235 224 aaKnown RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 MKRN3Q13064 507 aaKnown RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 PSMD2Q13200 908 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 HACE1Q8IYU2 909 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 DHX38Q92620 1227 aaKnown RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 CALR3Q96L12 384 aaKnown RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 UTP6Q9NYH9 597 aaKnown RBP6.67□□□□□ -1.34
CSMD1-201ENST00000335551 EHD2Q9NZN4 543 aa6.67□□□□□ -1.34
CSMD1-201ENST00000335551 H2AFZP0C0S5 128 aa6.66□□□□□ -1.34
CSMD1-201ENST00000335551 TCP11X2Q5H9J9 407 aa6.66□□□□□ -1.34
CSMD1-201ENST00000335551 H2AFVQ71UI9 128 aa6.66□□□□□ -1.34
CSMD1-201ENST00000335551 THAP11Q96EK4 314 aa6.66□□□□□ -1.34
CSMD1-201ENST00000335551 CFAP36Q96G28 342 aa6.66□□□□□ -1.34
CSMD1-201ENST00000335551 PRXQ9BXM0 1461 aa6.66□□□□□ -1.34
CSMD1-201ENST00000335551 H0Y3Z8 333 aa6.66□□□□□ -1.34
CSMD1-201ENST00000335551 CFLARO15519 480 aa6.66□□□□□ -1.34
CSMD1-201ENST00000335551 PPP6R3Q5H9R7 873 aaPredicted RBP6.66□□□□□ -1.34
CSMD1-201ENST00000335551 ZC3H12BQ5HYM0 836 aaKnown RBP6.66□□□□□ -1.34
CSMD1-201ENST00000335551 KAZNQ674X7 775 aa6.66□□□□□ -1.34
CSMD1-201ENST00000335551 BZW1Q7L1Q6 419 aaKnown RBP6.66□□□□□ -1.34
CSMD1-201ENST00000335551 CASP10Q92851 521 aa6.66□□□□□ -1.34
CSMD1-201ENST00000335551 ATP6V1E2Q96A05 226 aa6.66□□□□□ -1.34
CSMD1-201ENST00000335551 CNBD2Q96M20 576 aa6.66□□□□□ -1.34
CSMD1-201ENST00000335551 POLD1P28340 1107 aa6.66□□□□□ -1.34
CSMD1-201ENST00000335551 ANKRD13DQ6ZTN6 518 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms