RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 MFAP3LO75121 409 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 BBOX1O75936 387 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 SYF2O95926 243 aaKnown RBP15.47■□□□□ 0.07
SF1-202ENST00000334944 FCER1AP12319 257 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 NFIAQ12857 509 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 NONOQ15233 471 aaKnown RBP eCLIP15.47■□□□□ 0.071e-6■■■■■ 28.9
SF1-202ENST00000334944 TCP11X2Q5H9J9 407 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 NCAPH2Q6IBW4 605 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 CABP7Q86V35 215 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 ZFPM1Q8IX07 1006 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 ZMYND12Q9H0C1 365 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 ZNF287Q9HBT7 754 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 TDP2O95551 362 aa15.46■□□□□ 0.07
SF1-202ENST00000334944 PDHBP11177 359 aa15.46■□□□□ 0.07
SF1-202ENST00000334944 PBX1P40424 430 aa15.46■□□□□ 0.07
SF1-202ENST00000334944 IRF2BP1Q8IU81 584 aa15.46■□□□□ 0.07
SF1-202ENST00000334944 DBNDD1Q9H9R9 158 aa15.46■□□□□ 0.07
SF1-202ENST00000334944 USP40Q9NVE5 1235 aa15.46■□□□□ 0.07
SF1-202ENST00000334944 RWDD2AQ9UIY3 292 aa15.46■□□□□ 0.07
SF1-202ENST00000334944 OR52Z1P0C646 297 aa15.46■□□□□ 0.07
SF1-202ENST00000334944 SATB1Q01826 763 aa15.46■□□□□ 0.07
SF1-202ENST00000334944 GBP6Q6ZN66 633 aa15.46■□□□□ 0.07
SF1-202ENST00000334944 KCTD1Q719H9 257 aa15.46■□□□□ 0.07
SF1-202ENST00000334944 TRIM47Q96LD4 638 aa15.46■□□□□ 0.07
SF1-202ENST00000334944 ZC3H12CQ9C0D7 883 aaKnown RBP15.46■□□□□ 0.07
SF1-202ENST00000334944 G3V3G9 751 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 H0YHG0 523 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 DCAF8Q5TAQ9 597 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 REXO1Q8N1G1 1221 aaKnown RBP15.45■□□□□ 0.06
SF1-202ENST00000334944 C6orf50Q9HD87 102 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 MED4Q9NPJ6 270 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 CDC23Q9UJX2 597 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 NAV1Q8NEY1 1877 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 POTEMA6NI47 508 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 SLC37A4O43826 429 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 KLRC4O43908 158 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 CCDC175P0C221 793 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 TNNI2P48788 182 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 ERVK-24P63145 666 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 ASIC1P78348 528 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 STK4Q13043 487 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 NEK8Q86SG6 692 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 HNRNPLLQ8WVV9 542 aaKnown RBP15.45■□□□□ 0.06
SF1-202ENST00000334944 SPZ1Q9BXG8 430 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 ADGRG1Q9Y653 693 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 MAST2Q6P0Q8 1798 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 DDX60LQ5H9U9 1706 aaKnown RBP15.45■□□□□ 0.06
SF1-202ENST00000334944 KLK7P49862 253 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 FKBP15Q5T1M5 1219 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 DYMQ7RTS9 669 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 SLC35F6Q8N357 371 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 GIMAP7Q8NHV1 300 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 CTAGE1Q96RT6 745 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 CHP1Q99653 195 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 CENPHQ9H3R5 247 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 MTMR4Q9NYA4 1195 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 RAB21Q9UL25 225 aa15.45■□□□□ 0.06
SF1-202ENST00000334944 EBAG9O00559 213 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 PLCG2P16885 1265 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 ADRA2BP18089 450 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 INPP5BP32019 993 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 KRT9P35527 623 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 KIAA0825Q8IV33 1275 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 ADSSL1Q8N142 457 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 BCAS4Q8TDM0 211 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 SLF1Q9BQI6 1058 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 MYH8P13535 1937 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 SNAP25P60880 206 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 PDE4DQ08499 809 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 CCDC96Q2M329 555 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 C15orf52Q6ZUT6 534 aaKnown RBP15.44■□□□□ 0.06
SF1-202ENST00000334944 SLC39A2Q9NP94 309 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 TRIM10Q9UDY6 481 aa15.44■□□□□ 0.06
SF1-202ENST00000334944 THSD7AQ9UPZ6 1657 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 SPATA31A6Q5VVP1 1343 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 B4DLN1 442 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 TAL1P17542 331 aaPredicted RBP15.43■□□□□ 0.06
SF1-202ENST00000334944 PAX7P23759 505 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 ACTN3Q08043 901 aaPredicted RBP15.43■□□□□ 0.06
SF1-202ENST00000334944 MSANTD4Q8NCY6 345 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 PANX2Q96RD6 677 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 NUDT12Q9BQG2 462 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 RMND1Q9NWS8 449 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 TRPC5Q9UL62 973 aaPredicted RBP15.43■□□□□ 0.06
SF1-202ENST00000334944 GAKO14976 1311 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 GNA11P29992 359 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 GGCXP38435 758 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 KRT25Q7Z3Z0 450 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 FCHSD1Q86WN1 690 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 DAGLBQ8NCG7 672 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 MMTAG2Q9BU76 263 aaKnown RBP15.43■□□□□ 0.06
SF1-202ENST00000334944 KBTBD4Q9NVX7 518 aa15.43■□□□□ 0.06
SF1-202ENST00000334944 LIMA1Q9UHB6 759 aaKnown RBP15.43■□□□□ 0.06
SF1-202ENST00000334944 NEBLO76041 1014 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 RBM5P52756 815 aaKnown RBP eCLIP15.42■□□□□ 0.06
SF1-202ENST00000334944 LRCH2Q5VUJ6 765 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 ABHD10Q9NUJ1 306 aa15.42■□□□□ 0.06
SF1-202ENST00000334944 PPP1R11O60927 126 aaPredicted RBP15.42■□□□□ 0.06
SF1-202ENST00000334944 PRPF6O94906 941 aaKnown RBP15.42■□□□□ 0.06
SF1-202ENST00000334944 CSGALNACT2Q8N6G5 542 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms