RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 SEC63Q9UGP8 760 aaKnown RBP18.62■□□□□ 0.57
HDDC2-201ENST00000318787 GNEQ9Y223 722 aaKnown RBP18.62■□□□□ 0.57
HDDC2-201ENST00000318787 PNMA6FA0A0J9YX94 578 aa18.61■□□□□ 0.57
HDDC2-201ENST00000318787 CALM1P0DP23 149 aa18.61■□□□□ 0.57
HDDC2-201ENST00000318787 CALM2P0DP24 149 aa18.61■□□□□ 0.57
HDDC2-201ENST00000318787 CALM3P0DP25 149 aa18.61■□□□□ 0.57
HDDC2-201ENST00000318787 CST5P28325 142 aaPredicted RBP18.61■□□□□ 0.57
HDDC2-201ENST00000318787 TRAF1Q13077 416 aa18.61■□□□□ 0.57
HDDC2-201ENST00000318787 KRT32Q14532 448 aa18.61■□□□□ 0.57
HDDC2-201ENST00000318787 PPP2R5BQ15173 497 aa18.61■□□□□ 0.57
HDDC2-201ENST00000318787 CXCL17Q6UXB2 119 aa18.61■□□□□ 0.57
HDDC2-201ENST00000318787 SEPT14Q6ZU15 432 aa18.61■□□□□ 0.57
HDDC2-201ENST00000318787 FCHSD1Q86WN1 690 aa18.61■□□□□ 0.57
HDDC2-201ENST00000318787 OR6J1Q8NGC5 347 aa18.61■□□□□ 0.57
HDDC2-201ENST00000318787 MTMR8Q96EF0 704 aa18.61■□□□□ 0.57
HDDC2-201ENST00000318787 LOC102724159A0A0B4J2E5 919 aa18.6■□□□□ 0.57
HDDC2-201ENST00000318787 ZEB2O60315 1214 aa18.6■□□□□ 0.57
HDDC2-201ENST00000318787 REC8O95072 547 aa18.6■□□□□ 0.57
HDDC2-201ENST00000318787 MYCLP12524 364 aaPredicted RBP18.6■□□□□ 0.57
HDDC2-201ENST00000318787 CPA1P15085 419 aa18.6■□□□□ 0.57
HDDC2-201ENST00000318787 LIFRP42702 1097 aa18.6■□□□□ 0.57
HDDC2-201ENST00000318787 SNX17Q15036 470 aa18.6■□□□□ 0.57
HDDC2-201ENST00000318787 PWP2Q15269 919 aaKnown RBP18.6■□□□□ 0.57
HDDC2-201ENST00000318787 CCSAPQ6IQ19 270 aaPredicted RBP18.6■□□□□ 0.57
HDDC2-201ENST00000318787 JAKMIP1Q96N16 626 aaKnown RBP18.6■□□□□ 0.57
HDDC2-201ENST00000318787 GDF15Q99988 308 aa18.6■□□□□ 0.57
HDDC2-201ENST00000318787 SZT2Q5T011 3432 aa18.6■□□□□ 0.57
HDDC2-201ENST00000318787 hCG_1642624A0A1W2PR95 340 aa18.59■□□□□ 0.57
HDDC2-201ENST00000318787 OPLAHO14841 1288 aa18.59■□□□□ 0.57
HDDC2-201ENST00000318787 CLTBP09497 229 aa18.59■□□□□ 0.57
HDDC2-201ENST00000318787 TXNP10599 105 aaKnown RBP18.59■□□□□ 0.57
HDDC2-201ENST00000318787 GNAQP50148 359 aa18.59■□□□□ 0.57
HDDC2-201ENST00000318787 STXBP2Q15833 593 aa18.59■□□□□ 0.57
HDDC2-201ENST00000318787 DUSP28Q4G0W2 176 aa18.59■□□□□ 0.57
HDDC2-201ENST00000318787 DHX32Q7L7V1 743 aaKnown RBP18.59■□□□□ 0.57
HDDC2-201ENST00000318787 SH3RF1Q7Z6J0 888 aa18.59■□□□□ 0.57
HDDC2-201ENST00000318787 SCFD2Q8WU76 684 aa18.59■□□□□ 0.57
HDDC2-201ENST00000318787 COPS5Q92905 334 aa18.59■□□□□ 0.57
HDDC2-201ENST00000318787 MAP3K14Q99558 947 aa18.59■□□□□ 0.57
HDDC2-201ENST00000318787 PDLIM7Q9NR12 457 aa18.59■□□□□ 0.57
HDDC2-201ENST00000318787 A0A0U1RQG5 324 aaPredicted RBP18.58■□□□□ 0.57
HDDC2-201ENST00000318787 DCDC2CA8MYV0 355 aa18.58■□□□□ 0.57
HDDC2-201ENST00000318787 GCOM1H8Y6P7 765 aaPredicted RBP18.58■□□□□ 0.57
HDDC2-201ENST00000318787 CTAGE5O15320 804 aa18.58■□□□□ 0.57
HDDC2-201ENST00000318787 MYL3P08590 195 aa18.58■□□□□ 0.57
HDDC2-201ENST00000318787 POLR2MP0CAP2 368 aa18.58■□□□□ 0.57
HDDC2-201ENST00000318787 EDNRBP24530 442 aa18.58■□□□□ 0.57
HDDC2-201ENST00000318787 HSD17B4P51659 736 aa18.58■□□□□ 0.57
HDDC2-201ENST00000318787 CHMP4BP1P59074 171 aa18.58■□□□□ 0.57
HDDC2-201ENST00000318787 TTLL4Q14679 1199 aa18.58■□□□□ 0.57
HDDC2-201ENST00000318787 SRBD1Q8N5C6 995 aaKnown RBP18.58■□□□□ 0.57
HDDC2-201ENST00000318787 LZTS2Q9BRK4 669 aa18.58■□□□□ 0.57
HDDC2-201ENST00000318787 SPZ1Q9BXG8 430 aa18.58■□□□□ 0.57
HDDC2-201ENST00000318787 PXMP2Q9NR77 195 aa18.58■□□□□ 0.57
HDDC2-201ENST00000318787 FANCBQ8NB91 859 aa18.57■□□□□ 0.56
HDDC2-201ENST00000318787 BADQ92934 168 aa18.57■□□□□ 0.56
HDDC2-201ENST00000318787 ZFP91Q96JP5 570 aaPredicted RBP18.57■□□□□ 0.56
HDDC2-201ENST00000318787 TMEM39AQ9NV64 488 aa18.57■□□□□ 0.56
HDDC2-201ENST00000318787 SNX14Q9Y5W7 946 aa18.57■□□□□ 0.56
HDDC2-201ENST00000318787 ELP1O95163 1332 aa18.57■□□□□ 0.56
HDDC2-201ENST00000318787 LAMA3Q16787 3333 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 KLF18A0A0U1RQI7 1052 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 ZBTB43O43298 467 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 NR3C2P08235 984 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 HMGB1P09429 215 aaKnown RBP18.56■□□□□ 0.56
HDDC2-201ENST00000318787 RAG1P15918 1043 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 HSPA4P34932 840 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 CPT1AP50416 773 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 PSMC6P62333 389 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 LY6KQ17RY6 165 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 BRDTQ58F21 947 aaPredicted RBP18.56■□□□□ 0.56
HDDC2-201ENST00000318787 C1orf53Q5VUE5 145 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 ERICH6BQ5W0A0 696 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 APOA5Q6Q788 366 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 BLOC1S2Q6QNY1 142 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 SMARCC2Q8TAQ2 1214 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 IWS1Q96ST2 819 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 Q9Y3F1 56 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 DOCK5Q9H7D0 1870 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 MROH7Q68CQ1 1323 aa18.56■□□□□ 0.56
HDDC2-201ENST00000318787 RBM47A0AV96 593 aaKnown RBP18.55■□□□□ 0.56
HDDC2-201ENST00000318787 TRIM43BA6NCK2 446 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 GOLGA8AA7E2F4 631 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 GOLGA8BA8MQT2 603 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 SORBS3O60504 671 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 ARIH2O95376 493 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 EXOSC10Q01780 885 aaKnown RBP18.55■□□□□ 0.56
HDDC2-201ENST00000318787 RTN1Q16799 776 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 TSGA10IPQ3SY00 556 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 SGMS1Q86VZ5 419 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 TDHQ8IZJ6 230 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 CUL5Q93034 780 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 TRIM43Q96BQ3 446 aaPredicted RBP18.55■□□□□ 0.56
HDDC2-201ENST00000318787 MAF1Q9H063 256 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 BRPF3Q9ULD4 1205 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 MRVI1Q9Y6F6 885 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 ARVCFO00192 962 aa18.55■□□□□ 0.56
HDDC2-201ENST00000318787 NKRFO15226 690 aaKnown RBP eCLIP18.55■□□□□ 0.56
HDDC2-201ENST00000318787 TLR3O15455 904 aaKnown RBP18.55■□□□□ 0.56
HDDC2-201ENST00000318787 CASTP20810 708 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms