RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 CLTAP09496 248 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 PDXDC2PQ6P474 469 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 TRIM58Q8NG06 486 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 ISCA1Q9BUE6 129 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 DDX47Q9H0S4 455 aaKnown RBP15.71■□□□□ 0.11
PABPC1-201ENST00000318607 HAUS2Q9NVX0 235 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 CAPN11Q9UMQ6 739 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 NIP7Q9Y221 180 aaKnown RBP eCLIP15.71■□□□□ 0.11
PABPC1-201ENST00000318607 NRAPQ86VF7 1730 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 FAM237AA0A1B0GTK4 181 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 OPLAHO14841 1288 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 UPP2O95045 317 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 ARID4AP29374 1257 aaPredicted RBP15.71■□□□□ 0.11
PABPC1-201ENST00000318607 CTNNA1P35221 906 aaKnown RBP15.71■□□□□ 0.11
PABPC1-201ENST00000318607 DHX9Q08211 1270 aaKnown RBP15.71■□□□□ 0.11
PABPC1-201ENST00000318607 TUBB2AQ13885 445 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 PPP2R5AQ15172 486 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 ADSSL1Q8N142 457 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 TUBB2BQ9BVA1 445 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 MYO1AQ9UBC5 1043 aa15.71■□□□□ 0.11
PABPC1-201ENST00000318607 GBP2P32456 591 aaPredicted RBP15.7■□□□□ 0.1
PABPC1-201ENST00000318607 ATP2C1P98194 919 aaPredicted RBP15.7■□□□□ 0.1
PABPC1-201ENST00000318607 TRIM14Q14142 442 aa15.7■□□□□ 0.1
PABPC1-201ENST00000318607 FAM133AQ8N9E0 248 aa15.7■□□□□ 0.1
PABPC1-201ENST00000318607 PIGBQ92521 554 aa15.7■□□□□ 0.1
PABPC1-201ENST00000318607 CCT8L2Q96SF2 557 aa15.7■□□□□ 0.1
PABPC1-201ENST00000318607 NOVA2Q9UNW9 492 aaKnown RBP15.7■□□□□ 0.1
PABPC1-201ENST00000318607 P2RX5Q93086 422 aa15.7■□□□□ 0.1
PABPC1-201ENST00000318607 ZBED6P86452 979 aa15.7■□□□□ 0.1
PABPC1-201ENST00000318607 KRT71Q3SY84 523 aa15.7■□□□□ 0.1
PABPC1-201ENST00000318607 CD2APQ9Y5K6 639 aa15.7■□□□□ 0.1
PABPC1-201ENST00000318607 POTEMA6NI47 508 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 TUBBP07437 444 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 CHRNDQ07001 517 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 MAEAQ7L5Y9 396 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 SPATA20Q8TB22 786 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 THOC1Q96FV9 657 aaKnown RBP15.69■□□□□ 0.1
PABPC1-201ENST00000318607 GPR101Q96P66 508 aaPredicted RBP15.69■□□□□ 0.1
PABPC1-201ENST00000318607 NOX5Q96PH1 765 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 PDE8AO60658 829 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 CLSTN1O94985 981 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 PPP1R7Q15435 360 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 CFAP221Q4G0U5 840 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 FAM133BQ5BKY9 247 aaKnown RBP15.69■□□□□ 0.1
PABPC1-201ENST00000318607 HAUS3Q68CZ6 603 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 GIGYF2Q6Y7W6 1299 aaKnown RBP15.69■□□□□ 0.1
PABPC1-201ENST00000318607 CCDC25Q86WR0 208 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 IFT20Q8IY31 132 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 AMOTL1Q8IY63 956 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 CHORDC1Q9UHD1 332 aaPredicted RBP15.69■□□□□ 0.1
PABPC1-201ENST00000318607 SUFUQ9UMX1 484 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 KLRK1P26718 216 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 PRDX5P30044 214 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 EPHB4P54760 987 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 ZNF473Q8WTR7 871 aaKnown RBP15.69■□□□□ 0.1
PABPC1-201ENST00000318607 STAG1Q8WVM7 1258 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 TMEM260Q9NX78 707 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 CACNA1FO60840 1977 aa15.69■□□□□ 0.1
PABPC1-201ENST00000318607 TMEM110-MUSTN1A8MSY1 372 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 ABCB4P21439 1286 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 TNNI2P48788 182 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 CLNS1AP54105 237 aaKnown RBP15.68■□□□□ 0.1
PABPC1-201ENST00000318607 DCAF17Q5H9S7 520 aaPredicted RBP15.68■□□□□ 0.1
PABPC1-201ENST00000318607 SUSD4Q5VX71 490 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 PAPD7Q5XG87 772 aaKnown RBP15.68■□□□□ 0.1
PABPC1-201ENST00000318607 B4GALNT4Q76KP1 1039 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 SH3RF1Q7Z6J0 888 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 CELF4Q9BZC1 486 aaKnown RBP15.68■□□□□ 0.1
PABPC1-201ENST00000318607 NDST4Q9H3R1 872 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 ODF2LQ9ULJ1 636 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 RGPD2P0DJD1 1756 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 PKD1L3Q7Z443 1732 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 NWD2Q9ULI1 1742 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 PAPPAQ13219 1627 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 ZNF233A6NK53 670 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 GOLGA8KD6RF30 607 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 CCDC172P0C7W6 258 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 TROAPQ12815 778 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 TMTC3Q6ZXV5 915 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 SLC51AQ86UW1 340 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 LSM14BQ9BX40 385 aaKnown RBP15.68■□□□□ 0.1
PABPC1-201ENST00000318607 SHANK3Q9BYB0 1731 aa15.68■□□□□ 0.1
PABPC1-201ENST00000318607 MEFVO15553 781 aaPredicted RBP15.67■□□□□ 0.1
PABPC1-201ENST00000318607 USP17L2Q6R6M4 530 aa15.67■□□□□ 0.1
PABPC1-201ENST00000318607 POTEDQ86YR6 584 aa15.67■□□□□ 0.1
PABPC1-201ENST00000318607 FBXL16Q8N461 479 aa15.67■□□□□ 0.1
PABPC1-201ENST00000318607 SPAG5Q96R06 1193 aa15.67■□□□□ 0.1
PABPC1-201ENST00000318607 ATP8A1Q9Y2Q0 1164 aa15.67■□□□□ 0.1
PABPC1-201ENST00000318607 DCDC2CA8MYV0 355 aa15.67■□□□□ 0.1
PABPC1-201ENST00000318607 PRPF3O43395 683 aaKnown RBP15.67■□□□□ 0.1
PABPC1-201ENST00000318607 NLRP14Q86W24 1093 aa15.67■□□□□ 0.1
PABPC1-201ENST00000318607 PNMA1Q8ND90 353 aa15.67■□□□□ 0.1
PABPC1-201ENST00000318607 DUSP9Q99956 384 aaKnown RBP15.67■□□□□ 0.1
PABPC1-201ENST00000318607 SPATA31A3Q5VYP0 1347 aa15.67■□□□□ 0.1
PABPC1-201ENST00000318607 ACTN1P12814 892 aa15.67■□□□□ 0.1
PABPC1-201ENST00000318607 KLRC1P26715 233 aa15.67■□□□□ 0.1
PABPC1-201ENST00000318607 NAALADL2Q58DX5 795 aa15.67■□□□□ 0.1
PABPC1-201ENST00000318607 HIBCHQ6NVY1 386 aaPredicted RBP15.67■□□□□ 0.1
PABPC1-201ENST00000318607 LRRC15Q8TF66 581 aa15.67■□□□□ 0.1
PABPC1-201ENST00000318607 STK38LQ9Y2H1 464 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms