RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PEX26Q7Z412 305 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 DDX42Q86XP3 938 aaKnown RBP eCLIP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 CNBD1Q8NA66 436 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 RPGRQ92834 1020 aaKnown RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 KIFC2Q96AC6 838 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 LRRC45Q96CN5 670 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 LACRTQ9GZZ8 138 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 GEMIN8Q9NWZ8 242 aaKnown RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 BAZ2BQ9UIF8 2168 aaKnown RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 H7C1D1 291 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 MEFVO15553 781 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 UQCRFS1P1P0C7P4 283 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 PDHBP11177 359 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 KIF11P52732 1056 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 ANTXR2P58335 489 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 GNPTABQ3T906 1256 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 NAIF1Q69YI7 327 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 NLRP14Q86W24 1093 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 MB21D1Q8N884 522 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 SPATA4Q8NEY3 305 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 FERMT2Q96AC1 680 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 IL17RAQ96F46 866 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 KAZALD1Q96I82 304 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 ADD3Q9UEY8 706 aaKnown RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 SRPRBQ9Y5M8 271 aaKnown RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 MED23Q9ULK4 1368 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 SH3TC1Q8TE82 1336 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 PLEKHG2Q9H7P9 1386 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 RGS16O15492 202 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 GTPBP6O43824 516 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 PLEKP08567 350 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 MYBL2P10244 700 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 KCNJ6P48051 423 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 ZBTB16Q05516 673 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 GFPT1Q06210 699 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 DHX9Q08211 1270 aaKnown RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 CAVIN4Q5BKX8 364 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 TBC1D9BQ66K14 1250 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 CCNI2Q6ZMN8 369 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 INTS8Q75QN2 995 aaKnown RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 CABP7Q86V35 215 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 MB21D2Q8IYB1 491 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 TBC1D5Q92609 795 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 ARHGEF2Q92974 986 aaKnown RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 RNPC3Q96LT9 517 aaKnown RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 CCT8L2Q96SF2 557 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 CPVLQ9H3G5 476 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 GREM2Q9H772 168 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 SEC31BQ9NQW1 1179 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 ADAMTS1Q9UHI8 967 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 A0A1B0GTH6 734 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 RIMBP2O15034 1052 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 PDHA1P08559 390 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 PAX7P23759 505 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 ZNF76P36508 570 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 BCAMP50895 628 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 ATP11AP98196 1134 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 MAEAQ7L5Y9 396 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 RASGRP2Q7LDG7 609 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 AMIGO3Q86WK7 504 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 ZIM3Q96PE6 472 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 PIH1D3Q9NQM4 214 aaKnown RBP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 MYO1AQ9UBC5 1043 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 ARPP21Q9UBL0 812 aaPredicted RBP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 ZBTB12Q9Y330 459 aaPredicted RBP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 PCDHA13Q9Y5I0 950 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 USP17L12C9JPN9 530 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 USP17L21D6R901 530 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 TSPY3P0CV98 308 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 TSPY8P0CW00 308 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 PLTPP55058 493 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 MAGOHP61326 146 aaKnown RBP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 SLC20A2Q08357 652 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 SFMBT2Q5VUG0 894 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 TPTE2Q6XPS3 522 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 CNPY4Q8N129 248 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 ZNF473Q8WTR7 871 aaKnown RBP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 MAGOHBQ96A72 148 aaKnown RBP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 DDX47Q9H0S4 455 aaKnown RBP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 SPATS2LQ9NUQ6 558 aaKnown RBP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 SAP30BPQ9UHR5 308 aaKnown RBP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 UTP11Q9Y3A2 253 aaKnown RBP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 SLIT3O75094 1523 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 SLIT2O94813 1529 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 FMNL1O95466 1100 aaPredicted RBP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 BMP6P22004 513 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 LSP1P33241 339 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 ZNF131P52739 623 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 MXRA7P84157 204 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 LRRC14Q15048 493 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 ASIC2Q16515 512 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 CCDC38Q502W7 563 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 SV2BQ7L1I2 683 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 DNAAF5Q86Y56 855 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 GDAP1Q8TB36 358 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 U2AF1L4Q8WU68 220 aaKnown RBP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 OSBPL9Q96SU4 736 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 PYM1Q9BRP8 204 aaKnown RBP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 AATFQ9NY61 560 aaKnown RBP eCLIP8.28□□□□□ -1.08
CDHR3-201ENST00000317716 PTPN22Q9Y2R2 807 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms