RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 LRRIQ4A6NIV6 560 aa14.28□□□□□ -0.12
AFF3-201ENST00000317233 MXD4Q14582 209 aaPredicted RBP14.28□□□□□ -0.12
AFF3-201ENST00000317233 EXOC4Q96A65 974 aa14.28□□□□□ -0.12
AFF3-201ENST00000317233 SENP1Q9P0U3 644 aa14.28□□□□□ -0.12
AFF3-201ENST00000317233 FSCBQ5H9T9 825 aa14.28□□□□□ -0.12
AFF3-201ENST00000317233 KIAA2013Q8IYS2 634 aa14.28□□□□□ -0.12
AFF3-201ENST00000317233 YY1AP1Q9H869 796 aa14.28□□□□□ -0.12
AFF3-201ENST00000317233 ANGPTL2Q9UKU9 493 aa14.28□□□□□ -0.12
AFF3-201ENST00000317233 DYMQ7RTS9 669 aa14.27□□□□□ -0.12
AFF3-201ENST00000317233 TRIM58Q8NG06 486 aa14.27□□□□□ -0.12
AFF3-201ENST00000317233 RAPGEF5Q92565 580 aa14.27□□□□□ -0.12
AFF3-201ENST00000317233 MRPS26Q9BYN8 205 aaKnown RBP14.27□□□□□ -0.12
AFF3-201ENST00000317233 SMARCAD1Q9H4L7 1026 aa14.27□□□□□ -0.12
AFF3-201ENST00000317233 MSH6P52701 1360 aa14.27□□□□□ -0.12
AFF3-201ENST00000317233 FAM160B1Q5W0V3 765 aa14.27□□□□□ -0.12
AFF3-201ENST00000317233 DEPDC1BQ8WUY9 529 aa14.27□□□□□ -0.12
AFF3-201ENST00000317233 HNRNPCP07910 306 aaKnown RBP eCLIP14.27□□□□□ -0.12
AFF3-201ENST00000317233 LIG3P49916 1009 aa14.27□□□□□ -0.12
AFF3-201ENST00000317233 PSMC1P62191 440 aaKnown RBP14.27□□□□□ -0.12
AFF3-201ENST00000317233 ANKS3Q6ZW76 656 aa14.27□□□□□ -0.12
AFF3-201ENST00000317233 PRG3Q9Y2Y8 225 aaPredicted RBP14.27□□□□□ -0.12
AFF3-201ENST00000317233 WDR7Q9Y4E6 1490 aa14.27□□□□□ -0.13
AFF3-201ENST00000317233 DDIT3P35638 169 aa14.27□□□□□ -0.13
AFF3-201ENST00000317233 IGBP1P78318 339 aa14.27□□□□□ -0.13
AFF3-201ENST00000317233 TUBB6Q9BUF5 446 aa14.27□□□□□ -0.13
AFF3-201ENST00000317233 ZNF280CQ8ND82 737 aa14.27□□□□□ -0.13
AFF3-201ENST00000317233 LSM14BQ9BX40 385 aaKnown RBP14.27□□□□□ -0.13
AFF3-201ENST00000317233 TOM1L1O75674 476 aa14.27□□□□□ -0.13
AFF3-201ENST00000317233 RPSAP08865 295 aaKnown RBP14.27□□□□□ -0.13
AFF3-201ENST00000317233 Q3C1V9 767 aa14.27□□□□□ -0.13
AFF3-201ENST00000317233 GGA1Q9UJY5 639 aa14.27□□□□□ -0.13
AFF3-201ENST00000317233 TAC1P20366 129 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 BMP2KLQ5H9B9 411 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 ARHGEF18Q6ZSZ5 1173 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 DHX32Q7L7V1 743 aaKnown RBP14.26□□□□□ -0.13
AFF3-201ENST00000317233 ARPP19P56211 112 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 CADPS2Q86UW7 1296 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 SH3KBP1Q96B97 665 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 TMEM245Q9H330 911 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 LRRC4Q9HBW1 653 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 DMAP1Q9NPF5 467 aaPredicted RBP14.26□□□□□ -0.13
AFF3-201ENST00000317233 PCDHB4Q9Y5E5 795 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 SAR1BQ9Y6B6 198 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 ARL4DP49703 201 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 TRIM71Q2Q1W2 868 aaKnown RBP14.26□□□□□ -0.13
AFF3-201ENST00000317233 RETREG2Q8NC44 543 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 FAM149B1Q96BN6 582 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 DCPSQ96C86 337 aaKnown RBP14.26□□□□□ -0.13
AFF3-201ENST00000317233 USP26Q9BXU7 913 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 KDRP35968 1356 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 IGSF3O75054 1194 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 FMNL1O95466 1100 aaPredicted RBP14.26□□□□□ -0.13
AFF3-201ENST00000317233 NELFBQ8WX92 580 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 CCDC90BQ9GZT6 254 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 GOLGA8KD6RF30 607 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 ARL4AP40617 200 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 MSH2P43246 934 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 BPIFB4P59827 614 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 ARL13BQ3SXY8 428 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 CHURC1Q8WUH1 139 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 CAB39Q9Y376 341 aaPredicted RBP14.26□□□□□ -0.13
AFF3-201ENST00000317233 PYGMP11217 842 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.26□□□□□ -0.13
AFF3-201ENST00000317233 EDEM3Q9BZQ6 932 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 MID2Q9UJV3 735 aa14.26□□□□□ -0.13
AFF3-201ENST00000317233 FRMD3A2A2Y4 597 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 TFDP1Q14186 410 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 PLEKHA4Q9H4M7 779 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 DBNLQ9UJU6 430 aaKnown RBP14.25□□□□□ -0.13
AFF3-201ENST00000317233 RNF113AO15541 343 aaKnown RBP14.25□□□□□ -0.13
AFF3-201ENST00000317233 PRPF4O43172 522 aaKnown RBP eCLIP14.25□□□□□ -0.13
AFF3-201ENST00000317233 MEI1Q5TIA1 1274 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 UIMC1Q96RL1 719 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 ARHGEF3Q9NR81 526 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 DDX28Q9NUL7 540 aaKnown RBP14.25□□□□□ -0.13
AFF3-201ENST00000317233 KCNH3Q9ULD8 1083 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 JRKLQ9Y4A0 524 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 MYO9BQ13459 2157 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 DPP8Q6V1X1 898 aaPredicted RBP14.25□□□□□ -0.13
AFF3-201ENST00000317233 TAB3Q8N5C8 712 aaPredicted RBP14.25□□□□□ -0.13
AFF3-201ENST00000317233 NLRP4Q96MN2 994 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 AATFQ9NY61 560 aaKnown RBP eCLIP14.25□□□□□ -0.13
AFF3-201ENST00000317233 K7ENM7 598 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 CFLARO15519 480 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 PARVGQ9HBI0 331 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 LRWD1Q9UFC0 647 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 PHF8Q9UPP1 1060 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 DCTN3O75935 186 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 AARSP49588 968 aaKnown RBP eCLIP14.25□□□□□ -0.13
AFF3-201ENST00000317233 NSUN2Q08J23 767 aaKnown RBP eCLIP14.25□□□□□ -0.13
AFF3-201ENST00000317233 NCAPG2Q86XI2 1143 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 ST13P4Q8IZP2 240 aaPredicted RBP14.25□□□□□ -0.13
AFF3-201ENST00000317233 DPYSL4O14531 572 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 U2AF2P26368 475 aaKnown RBP eCLIP14.25□□□□□ -0.13
AFF3-201ENST00000317233 CEP78Q5JTW2 689 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 DCAF15Q66K64 600 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 KRT25Q7Z3Z0 450 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 SULF1Q8IWU6 871 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 NELFCDQ8IXH7 590 aa14.25□□□□□ -0.13
AFF3-201ENST00000317233 RHPN1Q8TCX5 695 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms