RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 IQANK1A0A1B0GTG1 560 aa16.77■□□□□ 0.28
HCFC1-201ENST00000310441 NPR1P16066 1061 aa16.77■□□□□ 0.28
HCFC1-201ENST00000310441 H7C0C1 242 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 H2AFZP0C0S5 128 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 PMLP29590 882 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 ATP5OP48047 213 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 PNOCQ13519 176 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 H2AFVQ71UI9 128 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 MAEAQ7L5Y9 396 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 NDUFAF2Q8N183 169 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 KIF2CQ99661 725 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 PBRM1Q86U86 1689 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 SPDYE2BA6NHP3 402 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 DDAH1O94760 285 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 CFBP00751 764 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 SPDYE6P0CI01 402 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 ADKP55263 362 aaKnown RBP16.77■□□□□ 0.27
HCFC1-201ENST00000310441 GUCY2DQ02846 1103 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 EPN1Q9Y6I3 576 aaPredicted RBP16.77■□□□□ 0.27
HCFC1-201ENST00000310441 SYCE1LA8MT33 242 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 NLRC4Q9NPP4 1024 aa16.77■□□□□ 0.27
HCFC1-201ENST00000310441 SAT1P21673 171 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 TRAPPC10P48553 1259 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 DYMQ7RTS9 669 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 C8orf58Q8NAV2 365 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 OR9Q1Q8NGQ5 310 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 SMCO2A6NFE2 343 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 MYL7Q01449 175 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 GRIN1Q05586 938 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 KRT40Q6A162 431 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 LRRC8BQ6P9F7 803 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 SHROOM2Q13796 1616 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 WDR64B1ANS9 1081 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 H3BRJ5 948 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 OR52Z1P0C646 297 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 NEK2P51955 445 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 TRIM59Q8IWR1 403 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 CSADQ9Y600 493 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 ADCY2Q08462 1091 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 BLIDQ8IZY5 108 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 DISC1Q9NRI5 854 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 IGSF3O75054 1194 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 TAC1P20366 129 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 LIG3P49916 1009 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 ETF1P62495 437 aaKnown RBP16.76■□□□□ 0.27
HCFC1-201ENST00000310441 BCL2L12Q9HB09 334 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 IDI1Q13907 227 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 ZBTB18Q99592 522 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 NBPF10Q6P3W6 841 aaKnown RBP16.76■□□□□ 0.27
HCFC1-201ENST00000310441 PIP4K2CQ8TBX8 421 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 ARMT1Q9H993 441 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 SATB2Q9UPW6 733 aa16.76■□□□□ 0.27
HCFC1-201ENST00000310441 ANXA1P04083 346 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 C6orf118Q5T5N4 469 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 TEKT3Q9BXF9 490 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 PPP1R12AO14974 1030 aaPredicted RBP16.75■□□□□ 0.27
HCFC1-201ENST00000310441 KIF22Q14807 665 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 SPATA1Q5VX52 437 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 GNPATO15228 680 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 ECEL1O95672 775 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 CIITAP33076 1130 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 THOC5Q13769 683 aaKnown RBP16.75■□□□□ 0.27
HCFC1-201ENST00000310441 ARHGEF6Q15052 776 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 TTLL7Q6ZT98 887 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 ZSCAN10Q96SZ4 725 aaPredicted RBP16.75■□□□□ 0.27
HCFC1-201ENST00000310441 RPN1P04843 607 aaKnown RBP16.75■□□□□ 0.27
HCFC1-201ENST00000310441 POLR2MP0CAP2 368 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 ALCAMQ13740 583 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 DHTKD1Q96HY7 919 aaPredicted RBP16.75■□□□□ 0.27
HCFC1-201ENST00000310441 FMO2Q99518 471 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 EDEM3Q9BZQ6 932 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 SUN2Q9UH99 717 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 KDM5DQ9BY66 1539 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 RIMBP2O15034 1052 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 VPS41P49754 854 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 MYO1EQ12965 1108 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 FLOT2Q14254 428 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 ARL13BQ3SXY8 428 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 FSCBQ5H9T9 825 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 LZICQ8WZA0 190 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 EDC4Q6P2E9 1401 aaKnown RBP16.75■□□□□ 0.27
HCFC1-201ENST00000310441 H0YIN7 160 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 UBN1Q9NPG3 1134 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 ZFXP17010 805 aaPredicted RBP16.75■□□□□ 0.27
HCFC1-201ENST00000310441 EIF4A2Q14240 407 aaKnown RBP16.75■□□□□ 0.27
HCFC1-201ENST00000310441 CRLF3Q8IUI8 442 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 ENOX1Q8TC92 643 aaKnown RBP16.75■□□□□ 0.27
HCFC1-201ENST00000310441 ANO3Q9BYT9 981 aa16.75■□□□□ 0.27
HCFC1-201ENST00000310441 SGO2Q562F6 1265 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 KLHL29Q96CT2 875 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 OPTNQ96CV9 577 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 NBPF3Q9H094 633 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 PDE11AQ9HCR9 933 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 DPP8Q6V1X1 898 aaPredicted RBP16.74■□□□□ 0.27
HCFC1-201ENST00000310441 OTUB1Q96FW1 271 aaPredicted RBP16.74■□□□□ 0.27
HCFC1-201ENST00000310441 MLXIPQ9HAP2 919 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 OLA1Q9NTK5 396 aaKnown RBP16.74■□□□□ 0.27
HCFC1-201ENST00000310441 PTPN22Q9Y2R2 807 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 PCGF5Q86SE9 256 aa16.74■□□□□ 0.27
HCFC1-201ENST00000310441 PHKBQ93100 1093 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms