RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 USP17L17D6RBQ6 530 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 USP17L19D6RCP7 530 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 USP17L20D6RJB6 530 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 POLR2DO15514 142 aaKnown RBP6.67□□□□□ -1.34
SEC22A-201ENST00000309934 FAM13AO94988 1023 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 POTEJP0CG39 1038 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 PDHBP11177 359 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 AKR1B1P15121 316 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 KLRK1P26718 216 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 CCND2P30279 289 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 JAK3P52333 1124 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 SMTNP53814 917 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 USP17L24Q0WX57 530 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 PAK1Q13153 545 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 TUBB2AQ13885 445 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 R3HDM1Q15032 1099 aaKnown RBP6.67□□□□□ -1.34
SEC22A-201ENST00000309934 VWA3BQ502W6 1294 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 CDAN1Q8IWY9 1227 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 GPT2Q8TD30 523 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 GPR101Q96P66 508 aaPredicted RBP6.67□□□□□ -1.34
SEC22A-201ENST00000309934 TUBB2BQ9BVA1 445 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 GPBP1L1Q9HC44 474 aaPredicted RBP6.67□□□□□ -1.34
SEC22A-201ENST00000309934 TBC1D22BQ9NU19 505 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 KCND2Q9NZV8 630 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 HACL1Q9UJ83 578 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 MRFAP1Q9Y605 127 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.67□□□□□ -1.34
SEC22A-201ENST00000309934 PVALEFA0A1B0GWK0 134 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 PLEKHA8P1O95397 391 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 SH3BGRP55822 239 aaPredicted RBP6.66□□□□□ -1.34
SEC22A-201ENST00000309934 SYCP1Q15431 976 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 ZKSCAN8Q15776 578 aaPredicted RBP6.66□□□□□ -1.34
SEC22A-201ENST00000309934 APOBEC3HQ6NTF7 200 aaKnown RBP6.66□□□□□ -1.34
SEC22A-201ENST00000309934 PTF1AQ7RTS3 328 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 CNGA4Q8IV77 575 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 PROM2Q8N271 834 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 ZC3H15Q8WU90 426 aaKnown RBP6.66□□□□□ -1.34
SEC22A-201ENST00000309934 TMEM63CQ9P1W3 806 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 TMX2Q9Y320 296 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 CLIC4Q9Y696 253 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 SFNP31947 248 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 MTIF2P46199 727 aaKnown RBP6.66□□□□□ -1.34
SEC22A-201ENST00000309934 UBASH3AP57075 661 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 NTRK3Q16288 839 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 TXNRD3Q86VQ6 643 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 MICALL2Q8IY33 904 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 FAM81BQ96LP2 452 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 ANO3Q9BYT9 981 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 CENPHQ9H3R5 247 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 BIN2Q9UBW5 565 aaPredicted RBP6.66□□□□□ -1.34
SEC22A-201ENST00000309934 MYO6Q9UM54 1294 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 CLRN2A0PK11 232 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 PSDA5PKW4 1024 aaPredicted RBP6.66□□□□□ -1.34
SEC22A-201ENST00000309934 GAS7O60861 476 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 FLOT1O75955 427 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 CTDNEP1O95476 244 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 KRT13P13646 458 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 GCKP35557 465 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 PSEN1P49768 467 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 IFI16Q16666 785 aaKnown RBP6.66□□□□□ -1.34
SEC22A-201ENST00000309934 SARM1Q6SZW1 724 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 USP50Q70EL3 339 aaPredicted RBP6.66□□□□□ -1.34
SEC22A-201ENST00000309934 CCDC84Q86UT8 332 aaPredicted RBP6.66□□□□□ -1.34
SEC22A-201ENST00000309934 SCYL3Q8IZE3 742 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 SRBD1Q8N5C6 995 aaKnown RBP6.66□□□□□ -1.34
SEC22A-201ENST00000309934 PDILTQ8N807 584 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 KIFC2Q96AC6 838 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 MAD2L2Q9UI95 211 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 PPME1Q9Y570 386 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 COL4A3BPQ9Y5P4 624 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 IVNS1ABPQ9Y6Y0 642 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 FRMPD2Q68DX3 1309 aaPredicted RBP6.66□□□□□ -1.34
SEC22A-201ENST00000309934 SYNRGQ9UMZ2 1314 aa6.66□□□□□ -1.34
SEC22A-201ENST00000309934 A0A1B0GUA9 196 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 GADD45BO75293 160 aaPredicted RBP6.65□□□□□ -1.34
SEC22A-201ENST00000309934 CAP2P40123 477 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 KCNB1Q14721 858 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 CCDC40Q4G0X9 1142 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 SEPT14Q6ZU15 432 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 RNF168Q8IYW5 571 aaPredicted RBP6.65□□□□□ -1.34
SEC22A-201ENST00000309934 PAF1Q8N7H5 531 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 SPC24Q8NBT2 197 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 ATP6V0A1Q93050 837 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 NACC1Q96RE7 527 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 MXD3Q9BW11 206 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 SLC24A3Q9HC58 644 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 METTL14Q9HCE5 456 aaKnown RBP6.65□□□□□ -1.34
SEC22A-201ENST00000309934 CCDC88AQ3V6T2 1871 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 ARHGEF35A5YM69 484 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 STXBP3O00186 592 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 N4BP1O75113 896 aaKnown RBP6.65□□□□□ -1.34
SEC22A-201ENST00000309934 SLC25A27O95847 323 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 FDPSP14324 419 aaKnown RBP6.65□□□□□ -1.34
SEC22A-201ENST00000309934 IDEP14735 1019 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 EEF1GP26641 437 aaKnown RBP6.65□□□□□ -1.34
SEC22A-201ENST00000309934 CA8P35219 290 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 TXKP42681 527 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 SLC20A2Q08357 652 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 SPATA1Q5VX52 437 aa6.65□□□□□ -1.34
SEC22A-201ENST00000309934 FAM160B1Q5W0V3 765 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms