RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 V9GY48 417 aaPredicted RBP11.53□□□□□ -0.56
MSRB3-201ENST00000308259 PDE8AO60658 829 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 ABL1P00519 1130 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 CYP7A1P22680 504 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 ATP11AP98196 1134 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 TUBB2AQ13885 445 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 ACCSLQ4AC99 568 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 SUSD4Q5VX71 490 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 ATL2Q8NHH9 583 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 TUBB2BQ9BVA1 445 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 NACAP1Q9BZK3 213 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 COL18A1P39060 1754 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 SMIM23A6NLE4 172 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 NMT2O60551 498 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 GYG1P46976 350 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 TRIM28Q13263 835 aaKnown RBP11.53□□□□□ -0.56
MSRB3-201ENST00000308259 FAM133BQ5BKY9 247 aaKnown RBP11.53□□□□□ -0.56
MSRB3-201ENST00000308259 SGMS1Q86VZ5 419 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 CCDC125Q86Z20 511 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 ZNF654Q8IZM8 581 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 CRACR2BQ8N4Y2 399 aaPredicted RBP11.53□□□□□ -0.56
MSRB3-201ENST00000308259 TEKT4Q8WW24 435 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 PLA2G12BQ9BX93 195 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 NOD2Q9HC29 1040 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 MYO1AQ9UBC5 1043 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 ANP32DO95626 131 aa11.52□□□□□ -0.56
MSRB3-201ENST00000308259 OATP04181 439 aa11.52□□□□□ -0.56
MSRB3-201ENST00000308259 IFNAR1P17181 557 aa11.52□□□□□ -0.56
MSRB3-201ENST00000308259 GUCY2FP51841 1108 aa11.52□□□□□ -0.56
MSRB3-201ENST00000308259 DYNLL1P63167 89 aaKnown RBP11.52□□□□□ -0.56
MSRB3-201ENST00000308259 PRPF4BQ13523 1007 aaKnown RBP11.52□□□□□ -0.56
MSRB3-201ENST00000308259 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.56
MSRB3-201ENST00000308259 FANCBQ8NB91 859 aa11.52□□□□□ -0.56
MSRB3-201ENST00000308259 RASSF8Q8NHQ8 419 aa11.52□□□□□ -0.56
MSRB3-201ENST00000308259 ZNF473Q8WTR7 871 aaKnown RBP11.52□□□□□ -0.56
MSRB3-201ENST00000308259 VCXQ9H320 206 aa11.52□□□□□ -0.56
MSRB3-201ENST00000308259 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.52□□□□□ -0.56
MSRB3-201ENST00000308259 CYP19A1P11511 503 aaPredicted RBP11.52□□□□□ -0.57
MSRB3-201ENST00000308259 PTPREP23469 700 aa11.52□□□□□ -0.57
MSRB3-201ENST00000308259 RBL2Q08999 1139 aa11.52□□□□□ -0.57
MSRB3-201ENST00000308259 GRIK3Q13003 919 aa11.52□□□□□ -0.57
MSRB3-201ENST00000308259 GKAP1Q5VSY0 366 aaPredicted RBP11.52□□□□□ -0.57
MSRB3-201ENST00000308259 KCND1Q9NSA2 647 aa11.52□□□□□ -0.57
MSRB3-201ENST00000308259 ADAMTS3O15072 1205 aa11.52□□□□□ -0.57
MSRB3-201ENST00000308259 HDLBPQ00341 1268 aaKnown RBP11.52□□□□□ -0.57
MSRB3-201ENST00000308259 NAA35Q5VZE5 725 aa11.52□□□□□ -0.57
MSRB3-201ENST00000308259 ZNF365Q70YC5 407 aa11.52□□□□□ -0.57
MSRB3-201ENST00000308259 HOMER3Q9NSC5 361 aa11.52□□□□□ -0.57
MSRB3-201ENST00000308259 RASSF10A6NK89 507 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 ATP6V1G1O75348 118 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 FSBPO95073 299 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 LDHCP07864 332 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 UQCRFS1P1P0C7P4 283 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 PYGBP11216 843 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 VEGFAP15692 232 aaPredicted RBP11.51□□□□□ -0.57
MSRB3-201ENST00000308259 KCNQ4P56696 695 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 CCDC122Q5T0U0 273 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 NLRP14Q86W24 1093 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 SYMPKQ92797 1274 aaKnown RBP11.51□□□□□ -0.57
MSRB3-201ENST00000308259 GBP5Q96PP8 586 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 CCT8L2Q96SF2 557 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 TNKSO95271 1327 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 H0YIN7 160 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 OPLAHO14841 1288 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 CRKLP46109 303 aaKnown RBP11.51□□□□□ -0.57
MSRB3-201ENST00000308259 RAB27AP51159 221 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 SPTY2D1Q68D10 685 aaPredicted RBP11.51□□□□□ -0.57
MSRB3-201ENST00000308259 SDCCAG8Q86SQ7 713 aaPredicted RBP11.51□□□□□ -0.57
MSRB3-201ENST00000308259 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 FAM81AQ8TBF8 368 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 TRIM11Q96F44 468 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 MMADHCQ9H3L0 296 aaPredicted RBP11.51□□□□□ -0.57
MSRB3-201ENST00000308259 SAR1BQ9Y6B6 198 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 CCDC160A6NGH7 325 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 ACTN4O43707 911 aaKnown RBP11.51□□□□□ -0.57
MSRB3-201ENST00000308259 SRGAP2O75044 1071 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 HIP1RO75146 1068 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 LIFRP42702 1097 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 FNBP4Q8N3X1 1017 aaPredicted RBP11.51□□□□□ -0.57
MSRB3-201ENST00000308259 DACH1Q9UI36 760 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 WDR19Q8NEZ3 1342 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 MAFGO15525 162 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 NR1D1P20393 614 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 PPARAQ07869 468 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 MORC3Q14149 939 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 RAD9BQ6WBX8 426 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 GPIHBP1Q8IV16 184 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 HVCN1Q96D96 273 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 PLIN2Q99541 437 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 KRT23Q9C075 422 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 FAM114A2Q9NRY5 505 aa11.51□□□□□ -0.57
MSRB3-201ENST00000308259 MACROD2A1Z1Q3 448 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 VIMP08670 466 aaKnown RBP11.5□□□□□ -0.57
MSRB3-201ENST00000308259 FERP16591 822 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 SESN3P58005 492 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 TATDN2Q93075 761 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 ALS2CR12Q96Q35 445 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 SELENOSQ9BQE4 189 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 COL5A2P05997 1499 aaPredicted RBP11.5□□□□□ -0.57
MSRB3-201ENST00000308259 DEXIO95424 95 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms