RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CCDC84Q86UT8 332 aaPredicted RBP7.36□□□□□ -1.23
USP47-201ENST00000305481 IRF2BP1Q8IU81 584 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 CCAR2Q8N163 923 aaKnown RBP7.36□□□□□ -1.23
USP47-201ENST00000305481 GLT8D2Q9H1C3 349 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 MAGEF1Q9HAY2 307 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 KCNMB3Q9NPA1 279 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 PPP1R1BQ9UD71 204 aaPredicted RBP7.36□□□□□ -1.23
USP47-201ENST00000305481 SRCAPQ6ZRS2 3230 aa7.36□□□□□ -1.23
USP47-201ENST00000305481 LRRC10BA6NIK2 292 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 PHF20L1A8MW92 1017 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 ZNF280AP59817 542 aaPredicted RBP7.35□□□□□ -1.23
USP47-201ENST00000305481 STK4Q13043 487 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 DHX8Q14562 1220 aaKnown RBP7.35□□□□□ -1.23
USP47-201ENST00000305481 TMEM119Q4V9L6 283 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 TC2NQ8N9U0 490 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 JDP2Q8WYK2 163 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 CALML4Q96GE6 196 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 TEPSINQ96N21 525 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 ARHGEF10LQ9HCE6 1279 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 TRMT1Q9NXH9 659 aaKnown RBP7.35□□□□□ -1.23
USP47-201ENST00000305481 ASTN2O75129 1339 aaPredicted RBP7.35□□□□□ -1.23
USP47-201ENST00000305481 MYMKA6NI61 221 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 POLD1P28340 1107 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 STAT2P52630 851 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 ARHGAP4P98171 946 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 AP3B2Q13367 1082 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 MCM6Q14566 821 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 RASA3Q14644 834 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 KRT31Q15323 416 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 TMEM266Q2M3C6 531 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 NYAP1Q6ZVC0 841 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 HPS3Q969F9 1004 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 LENG9Q96B70 501 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 LIMA1Q9UHB6 759 aaKnown RBP7.35□□□□□ -1.23
USP47-201ENST00000305481 PCDHA12Q9UN75 941 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 FCER1AP12319 257 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 HOXA13P31271 388 aaPredicted RBP7.35□□□□□ -1.23
USP47-201ENST00000305481 R3HDM1Q15032 1099 aaKnown RBP7.35□□□□□ -1.23
USP47-201ENST00000305481 ZYXQ15942 572 aaKnown RBP7.35□□□□□ -1.23
USP47-201ENST00000305481 TPD52L1Q16890 204 aaPredicted RBP7.35□□□□□ -1.23
USP47-201ENST00000305481 CCDC125Q86Z20 511 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 SNX29Q8TEQ0 813 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 TBC1D5Q92609 795 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 RAD54LQ92698 747 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 GOPCQ9HD26 462 aa7.35□□□□□ -1.23
USP47-201ENST00000305481 FAM86B1E9PN63 330 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 FAM86B2P0C5J1 330 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 ADKP55263 362 aaKnown RBP7.34□□□□□ -1.23
USP47-201ENST00000305481 SPIRE1Q08AE8 756 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 SEMA3FQ13275 785 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 TCP11X2Q5H9J9 407 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 CEP135Q66GS9 1140 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 KIAA0895Q8NCT3 520 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 ETNPPLQ8TBG4 499 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 DUSP9Q99956 384 aaKnown RBP7.34□□□□□ -1.23
USP47-201ENST00000305481 VCPKMTQ9H867 229 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 STK17AQ9UEE5 414 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 UQCRHLA0A096LP55 91 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 PIK3CDO00329 1044 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 UQCRHP07919 91 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 SREBF1P36956 1147 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 KCNJ6P48051 423 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 ASIC1P78348 528 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 RASSF7Q02833 373 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 PDE4DQ08499 809 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 TNIP1Q15025 636 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 KRT79Q5XKE5 535 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 TTI2Q6NXR4 508 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 MOXD1Q6UVY6 613 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 SV2BQ7L1I2 683 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 SAMD7Q7Z3H4 446 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 CYP2W1Q8TAV3 490 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 LARP4BQ92615 738 aaKnown RBP7.34□□□□□ -1.23
USP47-201ENST00000305481 PRIMPOLQ96LW4 560 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 RAB34Q9BZG1 259 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 RANBP17Q9H2T7 1088 aaKnown RBP7.34□□□□□ -1.23
USP47-201ENST00000305481 FBXO28Q9NVF7 368 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 BCS1LQ9Y276 419 aa7.34□□□□□ -1.23
USP47-201ENST00000305481 KCNJ18B7U540 433 aa7.34□□□□□ -1.24
USP47-201ENST00000305481 H7C1D1 291 aa7.34□□□□□ -1.24
USP47-201ENST00000305481 TPM2P07951 284 aa7.34□□□□□ -1.24
USP47-201ENST00000305481 TNNT1P13805 278 aa7.34□□□□□ -1.24
USP47-201ENST00000305481 CCT6AP40227 531 aaKnown RBP7.34□□□□□ -1.24
USP47-201ENST00000305481 STAT3P40763 770 aa7.34□□□□□ -1.24
USP47-201ENST00000305481 KCNJ12Q14500 433 aa7.34□□□□□ -1.24
USP47-201ENST00000305481 Q4G0T1 1027 aa7.34□□□□□ -1.24
USP47-201ENST00000305481 PRR16Q569H4 304 aa7.34□□□□□ -1.24
USP47-201ENST00000305481 HYIQ5T013 277 aa7.34□□□□□ -1.24
USP47-201ENST00000305481 MYRIPQ8NFW9 859 aa7.34□□□□□ -1.24
USP47-201ENST00000305481 KIFC2Q96AC6 838 aa7.34□□□□□ -1.24
USP47-201ENST00000305481 CTAGE1Q96RT6 745 aa7.34□□□□□ -1.24
USP47-201ENST00000305481 NAP1L4Q99733 375 aaKnown RBP7.34□□□□□ -1.24
USP47-201ENST00000305481 PTGER2P43116 358 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 GMPSP49915 693 aaPredicted RBP7.33□□□□□ -1.24
USP47-201ENST00000305481 AMPD3Q01432 767 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 CNNM4Q6P4Q7 775 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 CCDC174Q6PII3 467 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 DYMQ7RTS9 669 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 PPP1R13BQ96KQ4 1090 aa7.33□□□□□ -1.24
USP47-201ENST00000305481 VPS16Q9H269 839 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms