RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 CNPY4Q8N129 248 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 OR2W6PQ8NHA6 318 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 TBC1D5Q92609 795 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 DDX17Q92841 729 aaKnown RBP14.36□□□□□ -0.11
TRIM35-201ENST00000305364 TRIM6Q9C030 488 aaPredicted RBP14.36□□□□□ -0.11
TRIM35-201ENST00000305364 TBC1D7Q9P0N9 293 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 BAZ2BQ9UIF8 2168 aaKnown RBP14.35□□□□□ -0.11
TRIM35-201ENST00000305364 RCCD1A6NED2 376 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 ASIC2Q16515 512 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 ENAHQ8N8S7 591 aaPredicted RBP14.35□□□□□ -0.11
TRIM35-201ENST00000305364 UHMK1Q8TAS1 419 aaKnown RBP14.35□□□□□ -0.11
TRIM35-201ENST00000305364 PHF20Q9BVI0 1012 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 LSM14BQ9BX40 385 aaKnown RBP14.35□□□□□ -0.11
TRIM35-201ENST00000305364 ZNF652Q9Y2D9 606 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 TSPOAP1O95153 1857 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 ZSCAN5CA6NGD5 496 aaPredicted RBP14.35□□□□□ -0.11
TRIM35-201ENST00000305364 TTMPQ5BVD1 217 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 AP1M1Q9BXS5 423 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 STK38LQ9Y2H1 464 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 ABCC12Q96J65 1359 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 LRRC10BA6NIK2 292 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 FOXP2O15409 715 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 PLCG1P19174 1290 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 TMOD1P28289 359 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 ANKRD40Q6AI12 368 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 PEX26Q7Z412 305 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 CCDC197Q8NCU1 140 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 MCM9Q9NXL9 1143 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 WDR17Q8IZU2 1322 aa14.35□□□□□ -0.11
TRIM35-201ENST00000305364 HEG1Q9ULI3 1381 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 FAM107AO95990 144 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 IFNAR2P48551 515 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 GNAQP50148 359 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 APTXQ7Z2E3 356 aaKnown RBP14.34□□□□□ -0.11
TRIM35-201ENST00000305364 ADAT2Q7Z6V5 191 aaKnown RBP14.34□□□□□ -0.11
TRIM35-201ENST00000305364 CCDC25Q86WR0 208 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 NELFCDQ8IXH7 590 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 CYFIP2Q96F07 1278 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRIM35-201ENST00000305364 SLC1A4P43007 532 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 MAN2A1Q16706 1144 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 VWA3BQ502W6 1294 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 KRT79Q5XKE5 535 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 ARL6IP4Q66PJ3 421 aaKnown RBP14.34□□□□□ -0.11
TRIM35-201ENST00000305364 HAUS3Q68CZ6 603 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 KIRREL3Q8IZU9 778 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 SPATA20Q8TB22 786 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 LMBR1Q8WVP7 490 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 ADAMTS1Q9UHI8 967 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 PDS5AQ29RF7 1337 aaKnown RBP14.34□□□□□ -0.11
TRIM35-201ENST00000305364 PMS1P54277 932 aaKnown RBP14.34□□□□□ -0.11
TRIM35-201ENST00000305364 LRRC41Q15345 812 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 FAM133BQ5BKY9 247 aaKnown RBP14.34□□□□□ -0.11
TRIM35-201ENST00000305364 TBC1D1Q86TI0 1168 aaPredicted RBP14.34□□□□□ -0.11
TRIM35-201ENST00000305364 CREG2Q8IUH2 290 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 PRPF38AQ8NAV1 312 aaKnown RBP14.34□□□□□ -0.11
TRIM35-201ENST00000305364 PROCA1Q8NCQ7 364 aaPredicted RBP14.34□□□□□ -0.11
TRIM35-201ENST00000305364 HPS3Q969F9 1004 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRIM35-201ENST00000305364 ATP8A1Q9Y2Q0 1164 aa14.34□□□□□ -0.11
TRIM35-201ENST00000305364 DHX9Q08211 1270 aaKnown RBP14.33□□□□□ -0.11
TRIM35-201ENST00000305364 WDR59Q6PJI9 974 aa14.33□□□□□ -0.11
TRIM35-201ENST00000305364 KDM7AQ6ZMT4 941 aa14.33□□□□□ -0.11
TRIM35-201ENST00000305364 HOOK3Q86VS8 718 aa14.33□□□□□ -0.11
TRIM35-201ENST00000305364 HVCN1Q96D96 273 aa14.33□□□□□ -0.11
TRIM35-201ENST00000305364 SHOX2O60902 331 aaPredicted RBP14.33□□□□□ -0.12
TRIM35-201ENST00000305364 TSPY3P0CV98 308 aa14.33□□□□□ -0.12
TRIM35-201ENST00000305364 TSPY8P0CW00 308 aa14.33□□□□□ -0.12
TRIM35-201ENST00000305364 FCER1AP12319 257 aa14.33□□□□□ -0.12
TRIM35-201ENST00000305364 SMTNP53814 917 aa14.33□□□□□ -0.12
TRIM35-201ENST00000305364 MAGOHP61326 146 aaKnown RBP14.33□□□□□ -0.12
TRIM35-201ENST00000305364 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.33□□□□□ -0.12
TRIM35-201ENST00000305364 MAGOHBQ96A72 148 aaKnown RBP14.33□□□□□ -0.12
TRIM35-201ENST00000305364 DZIP1Q86YF9 867 aaKnown RBP14.33□□□□□ -0.12
TRIM35-201ENST00000305364 JAG2Q9Y219 1238 aa14.33□□□□□ -0.12
TRIM35-201ENST00000305364 MROH5Q6ZUA9 1318 aa14.33□□□□□ -0.12
TRIM35-201ENST00000305364 GLI1P08151 1106 aa14.33□□□□□ -0.12
TRIM35-201ENST00000305364 MYO1EQ12965 1108 aa14.33□□□□□ -0.12
TRIM35-201ENST00000305364 TMTC3Q6ZXV5 915 aa14.33□□□□□ -0.12
TRIM35-201ENST00000305364 SH3RF1Q7Z6J0 888 aa14.33□□□□□ -0.12
TRIM35-201ENST00000305364 VCPKMTQ9H867 229 aa14.33□□□□□ -0.12
TRIM35-201ENST00000305364 C6orf50Q9HD87 102 aa14.33□□□□□ -0.12
TRIM35-201ENST00000305364 FAM153BP0C7A2 387 aa14.32□□□□□ -0.12
TRIM35-201ENST00000305364 FAM153CQ494X1 144 aa14.32□□□□□ -0.12
TRIM35-201ENST00000305364 CCDC152Q4G0S7 254 aa14.32□□□□□ -0.12
TRIM35-201ENST00000305364 CYB5D1Q6P9G0 228 aa14.32□□□□□ -0.12
TRIM35-201ENST00000305364 NKX2-3Q8TAU0 364 aa14.32□□□□□ -0.12
TRIM35-201ENST00000305364 KCNK9Q9NPC2 374 aa14.32□□□□□ -0.12
TRIM35-201ENST00000305364 FAM153AQ9UHL3 310 aa14.32□□□□□ -0.12
TRIM35-201ENST00000305364 DIP2BQ9P265 1576 aa14.32□□□□□ -0.12
TRIM35-201ENST00000305364 DDAH1O94760 285 aa14.32□□□□□ -0.12
TRIM35-201ENST00000305364 PDHBP11177 359 aa14.32□□□□□ -0.12
TRIM35-201ENST00000305364 DYNLL1P63167 89 aaKnown RBP14.32□□□□□ -0.12
TRIM35-201ENST00000305364 DZIP3Q86Y13 1208 aaKnown RBP14.32□□□□□ -0.12
TRIM35-201ENST00000305364 MGARPQ8TDB4 240 aa14.32□□□□□ -0.12
TRIM35-201ENST00000305364 RUBCNQ92622 972 aa14.32□□□□□ -0.12
TRIM35-201ENST00000305364 ZKSCAN4Q969J2 545 aaPredicted RBP14.32□□□□□ -0.12
TRIM35-201ENST00000305364 THOC1Q96FV9 657 aaKnown RBP14.32□□□□□ -0.12
TRIM35-201ENST00000305364 UIMC1Q96RL1 719 aa14.32□□□□□ -0.12
TRIM35-201ENST00000305364 RGS16O15492 202 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms