RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 KDM3AQ9Y4C1 1321 aa11.17□□□□□ -0.62
TNFRSF11B-201ENST00000297350 COL11A2P13942 1736 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 TTLL1O95922 423 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 PMS1P54277 932 aaKnown RBP11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 TMEM119Q4V9L6 283 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 PAPD7Q5XG87 772 aaKnown RBP11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 KRT79Q5XKE5 535 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 LARP4BQ92615 738 aaKnown RBP11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 PIGSQ96S52 555 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 TSG101Q99816 390 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 MMTAG2Q9BU76 263 aaKnown RBP11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 NOC4LQ9BVI4 516 aaKnown RBP11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 IRX2Q9BZI1 471 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 NUCKS1Q9H1E3 243 aaKnown RBP11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 MAPK8IP1Q9UQF2 711 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 DAGLAQ9Y4D2 1042 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 TARSL2A2RTX5 802 aaKnown RBP11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 SERPINB2P05120 415 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 GOLGA8HP0CJ92 632 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 MRPL12P52815 198 aaKnown RBP11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 MAN2A1Q16706 1144 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 ANKRD40Q6AI12 368 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 USP17L2Q6R6M4 530 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 KIAA1328Q86T90 577 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 CCDC24Q8N4L8 307 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 AKT1S1Q96B36 256 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 NT5C3AQ9H0P0 336 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 EHD4Q9H223 541 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 ANKZF1Q9H8Y5 726 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 REXO2Q9Y3B8 237 aaKnown RBP11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 STK24Q9Y6E0 443 aa11.16□□□□□ -0.62
TNFRSF11B-201ENST00000297350 B4DLN1 442 aa11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 RNF225M0QZC1 329 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 TECP42680 631 aa11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 ZNF543Q08ER8 600 aa11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 SMC1AQ14683 1233 aaKnown RBP11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 SLC4A8Q2Y0W8 1093 aa11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 MAP9Q49MG5 647 aa11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 HYIQ5T013 277 aa11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 WDR59Q6PJI9 974 aa11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 RAD54LQ92698 747 aa11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 CUL5Q93034 780 aa11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 CCDC17Q96LX7 622 aa11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 PURBQ96QR8 312 aaKnown RBP11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 PSD3Q9NYI0 1048 aa11.15□□□□□ -0.62
TNFRSF11B-201ENST00000297350 USP17L5A8MUK1 530 aa11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 POLRMTO00411 1230 aaKnown RBP11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 PES1O00541 588 aaKnown RBP11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 CYP2C19P33261 490 aa11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 ITIH3Q06033 890 aa11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 STK4Q13043 487 aa11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 GRB10Q13322 594 aa11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 SPA17Q15506 151 aa11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 MIIPQ5JXC2 388 aa11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 CCDC122Q5T0U0 273 aa11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 HHIPL2Q6UWX4 724 aa11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 POTEDQ86YR6 584 aa11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 JAKMIP2Q96AA8 810 aa11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 VIPAS39Q9H9C1 493 aa11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 SAR1BQ9Y6B6 198 aa11.15□□□□□ -0.63
TNFRSF11B-201ENST00000297350 USO1O60763 962 aaKnown RBP11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 LCA5LO95447 670 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 GNA14O95837 355 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 HLA-DOAP06340 250 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 CLK2P49760 499 aaKnown RBP11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 VAV2P52735 878 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 EHHADHQ08426 723 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 VWA3BQ502W6 1294 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 BEND6Q5SZJ8 279 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 MOXD1Q6UVY6 613 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 FLAD1Q8NFF5 587 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 MTMR8Q96EF0 704 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 CHP1Q99653 195 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 BLOC1S4Q9NUP1 217 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 SERPINB13Q9UIV8 391 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 PLAGL2Q9UPG8 496 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 PRLRP16471 622 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 HERVK_113P62684 666 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 DDR1Q08345 913 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 KIF5AQ12840 1032 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 CCDC70Q6NSX1 233 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 CCDC155Q8N6L0 562 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 KIAA0895Q8NCT3 520 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 TRIM58Q8NG06 486 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 LRRC15Q8TF66 581 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 CEP63Q96MT8 703 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 NHEJ1Q9H9Q4 299 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 BMP2KQ9NSY1 1161 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 BIN2Q9UBW5 565 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 POLLQ9UGP5 575 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 PUF60Q9UHX1 559 aaKnown RBP11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 GUCA1BQ9UMX6 200 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 ATP6V0A2Q9Y487 856 aa11.14□□□□□ -0.63
TNFRSF11B-201ENST00000297350 ATAD5Q96QE3 1844 aa11.13□□□□□ -0.63
TNFRSF11B-201ENST00000297350 PPEF1O14829 653 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF11B-201ENST00000297350 SASH3O75995 380 aa11.13□□□□□ -0.63
TNFRSF11B-201ENST00000297350 SEC31AO94979 1220 aaKnown RBP11.13□□□□□ -0.63
TNFRSF11B-201ENST00000297350 TXKP42681 527 aa11.13□□□□□ -0.63
TNFRSF11B-201ENST00000297350 KCTD17Q8N5Z5 321 aa11.13□□□□□ -0.63
TNFRSF11B-201ENST00000297350 SYN2Q92777 582 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms