RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 PPP2R5DQ14738 602 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 USH1GQ495M9 461 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 SDR42E1Q8WUS8 393 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 RNF34Q969K3 372 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 TRIM11Q96F44 468 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 INHBAP08476 426 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 NSFP46459 744 aaKnown RBP12□□□□□ -0.49
PBRM1-201ENST00000296302 PPM1KQ8N3J5 372 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 ZBTB38Q8NAP3 1195 aaPredicted RBP12□□□□□ -0.49
PBRM1-201ENST00000296302 PGBD1Q96JS3 809 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 NFU1Q9UMS0 254 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 PTPN22Q9Y2R2 807 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 ATP7AQ04656 1500 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 MAP3K7O43318 606 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 TMTC3Q6ZXV5 915 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 DNAJC10Q8IXB1 793 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 CNBD1Q8NA66 436 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 ZMYND12Q9H0C1 365 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 P4HA1P13674 534 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 CYP27A1Q02318 531 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 PRR16Q569H4 304 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 OTUD6AQ7L8S5 288 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 UIMC1Q96RL1 719 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 ANGPTL2Q9UKU9 493 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 ARHGAP31Q2M1Z3 1444 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 GOLGA8QA0A0J9YX86 632 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 GOLGA8OA6NCC3 632 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 ERVV-2B6SEH9 535 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 GOLGA8NF8WBI6 632 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 H0YCG3 227 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 STAM2O75886 525 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 STMN1P16949 149 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 MYL7Q01449 175 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 SLC7A5Q01650 507 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 RPS6KA2Q15349 733 aa12□□□□□ -0.49
PBRM1-201ENST00000296302 M0R2C6 588 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 MYCLP12524 364 aaPredicted RBP11.99□□□□□ -0.49
PBRM1-201ENST00000296302 POLR2BP30876 1174 aaKnown RBP11.99□□□□□ -0.49
PBRM1-201ENST00000296302 LIFRP42702 1097 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 LRRC23Q53EV4 343 aaPredicted RBP11.99□□□□□ -0.49
PBRM1-201ENST00000296302 SGO2Q562F6 1265 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 MIS12Q9H081 205 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 CCDC87Q9NVE4 849 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 ZDHHC9Q9Y397 364 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 TTC37Q6PGP7 1564 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 K7ENM7 598 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 LMNAP02545 664 aaKnown RBP11.99□□□□□ -0.49
PBRM1-201ENST00000296302 MYCNP04198 464 aaPredicted RBP11.99□□□□□ -0.49
PBRM1-201ENST00000296302 GGCXP38435 758 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 MFAP3P55082 362 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 ZBTB17Q13105 803 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 PSMD2Q13200 908 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 KRT81Q14533 505 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 TBC1D1Q86TI0 1168 aaPredicted RBP11.99□□□□□ -0.49
PBRM1-201ENST00000296302 CDKL2Q92772 493 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.99□□□□□ -0.49
PBRM1-201ENST00000296302 ANAPC5Q9UJX4 755 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 PLAAQ9Y263 795 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 SH3BP5O60239 455 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 KCNJ6P48051 423 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 NAA30Q147X3 362 aaPredicted RBP11.99□□□□□ -0.49
PBRM1-201ENST00000296302 ANKRD20A4Q4UJ75 823 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 ANKRD20A8PQ5CZ79 823 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 ANKRD20A2Q5SQ80 823 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 ANKRD20A1Q5TYW2 823 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 NXNQ6DKJ4 435 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 TTLL7Q6ZT98 887 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 SAAL1Q96ER3 474 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 TSC22D3Q99576 134 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 NDST4Q9H3R1 872 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 PSMC2P35998 433 aaKnown RBP11.99□□□□□ -0.49
PBRM1-201ENST00000296302 POLE2P56282 527 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 DR1Q01658 176 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 NBPF10Q6P3W6 841 aaKnown RBP11.99□□□□□ -0.49
PBRM1-201ENST00000296302 FMR1NBQ8N0W7 255 aaPredicted RBP11.99□□□□□ -0.49
PBRM1-201ENST00000296302 GJA10Q969M2 543 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 ABHD10Q9NUJ1 306 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 TMOD4Q9NZQ9 345 aa11.99□□□□□ -0.49
PBRM1-201ENST00000296302 CPSF1Q10570 1443 aaKnown RBP11.98□□□□□ -0.49
PBRM1-201ENST00000296302 GARSP41250 739 aaKnown RBP11.98□□□□□ -0.49
PBRM1-201ENST00000296302 YWHAGP61981 247 aaKnown RBP eCLIP11.98□□□□□ -0.49
PBRM1-201ENST00000296302 NR5A1Q13285 461 aa11.98□□□□□ -0.49
PBRM1-201ENST00000296302 ARL6IP4Q66PJ3 421 aaKnown RBP11.98□□□□□ -0.49
PBRM1-201ENST00000296302 CDCA7Q9BWT1 371 aaPredicted RBP11.98□□□□□ -0.49
PBRM1-201ENST00000296302 TRIM6Q9C030 488 aaPredicted RBP11.98□□□□□ -0.49
PBRM1-201ENST00000296302 SUDS3Q9H7L9 328 aaPredicted RBP11.98□□□□□ -0.49
PBRM1-201ENST00000296302 USP27XA6NNY8 438 aa11.98□□□□□ -0.49
PBRM1-201ENST00000296302 ANKRD65E5RJM6 399 aa11.98□□□□□ -0.49
PBRM1-201ENST00000296302 MAPK13O15264 365 aa11.98□□□□□ -0.49
PBRM1-201ENST00000296302 PDE8BO95263 885 aa11.98□□□□□ -0.49
PBRM1-201ENST00000296302 GAP43P17677 238 aa11.98□□□□□ -0.49
PBRM1-201ENST00000296302 PTK2Q05397 1052 aa11.98□□□□□ -0.49
PBRM1-201ENST00000296302 LRRC63Q05C16 580 aa11.98□□□□□ -0.49
PBRM1-201ENST00000296302 BSPRYQ5W0U4 402 aa11.98□□□□□ -0.49
PBRM1-201ENST00000296302 ARMCX5Q6P1M9 558 aa11.98□□□□□ -0.49
PBRM1-201ENST00000296302 FAM133AQ8N9E0 248 aa11.98□□□□□ -0.49
PBRM1-201ENST00000296302 ZNF579Q8NAF0 562 aaKnown RBP11.98□□□□□ -0.49
PBRM1-201ENST00000296302 DIS3Q9Y2L1 958 aaKnown RBP11.98□□□□□ -0.49
PBRM1-201ENST00000296302 MRFAP1Q9Y605 127 aa11.98□□□□□ -0.49
PBRM1-201ENST00000296302 PRPF3O43395 683 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms