RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 ZBED6P86452 979 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 CERKLQ49MI3 558 aaPredicted RBP12.78□□□□□ -0.36
TGFA-201ENST00000295400 RBM43Q6ZSC3 357 aaKnown RBP12.78□□□□□ -0.36
TGFA-201ENST00000295400 POTEDQ86YR6 584 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 CCDC26Q8TAB7 109 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 CCDC127Q96BQ5 260 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 LRRN2O75325 713 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 VSNL1P62760 191 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 PPFIA1Q13136 1202 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 SF3B2Q13435 895 aaKnown RBP12.78□□□□□ -0.36
TGFA-201ENST00000295400 MGARPQ8TDB4 240 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 CEP95Q96GE4 821 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 ABCC12Q96J65 1359 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 PACSIN2Q9UNF0 486 aaPredicted RBP12.78□□□□□ -0.36
TGFA-201ENST00000295400 TCP1P17987 556 aaKnown RBP12.78□□□□□ -0.36
TGFA-201ENST00000295400 PRKG1Q13976 671 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 MARCH10Q8NA82 808 aaPredicted RBP12.78□□□□□ -0.36
TGFA-201ENST00000295400 AGPAT5Q9NUQ2 364 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 RASAL2Q9UJF2 1139 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 MRFAP1Q9Y605 127 aa12.78□□□□□ -0.36
TGFA-201ENST00000295400 XDHP47989 1333 aa12.77□□□□□ -0.36
TGFA-201ENST00000295400 HEXIM1O94992 359 aaKnown RBP12.77□□□□□ -0.36
TGFA-201ENST00000295400 TDP2O95551 362 aa12.77□□□□□ -0.36
TGFA-201ENST00000295400 ATP1A1P05023 1023 aaKnown RBP12.77□□□□□ -0.36
TGFA-201ENST00000295400 CD44P16070 742 aaKnown RBP12.77□□□□□ -0.36
TGFA-201ENST00000295400 CTNNA1P35221 906 aaKnown RBP12.77□□□□□ -0.36
TGFA-201ENST00000295400 ICA1Q05084 483 aa12.77□□□□□ -0.36
TGFA-201ENST00000295400 NCAPHQ15003 741 aa12.77□□□□□ -0.36
TGFA-201ENST00000295400 HOOK3Q86VS8 718 aa12.77□□□□□ -0.36
TGFA-201ENST00000295400 ARFGAP2Q8N6H7 521 aa12.77□□□□□ -0.36
TGFA-201ENST00000295400 TBC1D22AQ8WUA7 517 aa12.77□□□□□ -0.36
TGFA-201ENST00000295400 RIN2Q8WYP3 895 aaPredicted RBP12.77□□□□□ -0.36
TGFA-201ENST00000295400 NT5C3AQ9H0P0 336 aa12.77□□□□□ -0.36
TGFA-201ENST00000295400 SMARCAL1Q9NZC9 954 aa12.77□□□□□ -0.36
TGFA-201ENST00000295400 USTQ9Y2C2 406 aa12.77□□□□□ -0.36
TGFA-201ENST00000295400 WDR19Q8NEZ3 1342 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 CLRN2A0PK11 232 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 PCP11498 1178 aaKnown RBP12.77□□□□□ -0.37
TGFA-201ENST00000295400 STAT1P42224 750 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 VWA3BQ502W6 1294 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 TMC4Q7Z404 712 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 DDX12PQ92771 950 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 TMEM60Q9H2L4 133 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 SERPINB13Q9UIV8 391 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 MEGF6O75095 1541 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 BUB1BO60566 1050 aaPredicted RBP12.77□□□□□ -0.37
TGFA-201ENST00000295400 GAS7O60861 476 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 PRPF6O94906 941 aaKnown RBP12.77□□□□□ -0.37
TGFA-201ENST00000295400 KIF4AO95239 1232 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 SERPINB2P05120 415 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 KLK7P49862 253 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 FKBP3Q00688 224 aaKnown RBP12.77□□□□□ -0.37
TGFA-201ENST00000295400 DGKHQ86XP1 1220 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 FAM71BQ8TC56 605 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 AP1M1Q9BXS5 423 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 UTP11Q9Y3A2 253 aaKnown RBP12.77□□□□□ -0.37
TGFA-201ENST00000295400 PCDHA13Q9Y5I0 950 aa12.77□□□□□ -0.37
TGFA-201ENST00000295400 LGALS16A8MUM7 142 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 E9PMD0 336 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 ATP2C1P98194 919 aaPredicted RBP12.76□□□□□ -0.37
TGFA-201ENST00000295400 MAN2A1Q16706 1144 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 PPP4R3AQ6IN85 833 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 NSUN4Q96CB9 384 aaKnown RBP12.76□□□□□ -0.37
TGFA-201ENST00000295400 CAPS2Q9BXY5 557 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 KDM6AO15550 1401 aaPredicted RBP12.76□□□□□ -0.37
TGFA-201ENST00000295400 DIP2BQ9P265 1576 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 ACTN4O43707 911 aaKnown RBP12.76□□□□□ -0.37
TGFA-201ENST00000295400 ACTN2P35609 894 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 GFPT1Q06210 699 aaPredicted RBP12.76□□□□□ -0.37
TGFA-201ENST00000295400 CALCOCO2Q13137 446 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 EARS2Q5JPH6 523 aaKnown RBP12.76□□□□□ -0.37
TGFA-201ENST00000295400 NFRKBQ6P4R8 1299 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 PROCA1Q8NCQ7 364 aaPredicted RBP12.76□□□□□ -0.37
TGFA-201ENST00000295400 ADD3Q9UEY8 706 aaKnown RBP12.76□□□□□ -0.37
TGFA-201ENST00000295400 NR1I3Q14994 352 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 ADGRA1Q86SQ6 560 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 ATP2B4P23634 1241 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 ARL6IP4Q66PJ3 421 aaKnown RBP12.76□□□□□ -0.37
TGFA-201ENST00000295400 ANKRD40Q6AI12 368 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 GALNT17Q6IS24 598 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 PHLDB2Q86SQ0 1253 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 REXO1L1PQ8IX06 675 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 CCDC105Q8IYK2 499 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 RPGRIP1Q96KN7 1286 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 SYNCQ9H7C4 482 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 BCS1LQ9Y276 419 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 TNS3Q68CZ2 1445 aa12.76□□□□□ -0.37
TGFA-201ENST00000295400 A0A1B0GTH6 734 aa12.75□□□□□ -0.37
TGFA-201ENST00000295400 LRRC53A6NM62 1247 aa12.75□□□□□ -0.37
TGFA-201ENST00000295400 STK4Q13043 487 aa12.75□□□□□ -0.37
TGFA-201ENST00000295400 FBXO11Q86XK2 927 aa12.75□□□□□ -0.37
TGFA-201ENST00000295400 ZNF34Q8IZ26 560 aa12.75□□□□□ -0.37
TGFA-201ENST00000295400 CABS1Q96KC9 395 aa12.75□□□□□ -0.37
TGFA-201ENST00000295400 PHF20Q9BVI0 1012 aa12.75□□□□□ -0.37
TGFA-201ENST00000295400 PCIF1Q9H4Z3 704 aa12.75□□□□□ -0.37
TGFA-201ENST00000295400 ASIC3Q9UHC3 531 aa12.75□□□□□ -0.37
TGFA-201ENST00000295400 RRP15Q9Y3B9 282 aaKnown RBP12.75□□□□□ -0.37
TGFA-201ENST00000295400 SEMA3EO15041 775 aa12.75□□□□□ -0.37
TGFA-201ENST00000295400 GYPCP04921 128 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms