RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 N4BP3O15049 544 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 CYTH3O43739 400 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 ERLIN2O94905 339 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 RBM5P52756 815 aaKnown RBP eCLIP17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 FBXW10Q5XX13 1052 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 KANK3Q6NY19 840 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 PAGE5Q96GU1 130 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 TAB2Q9NYJ8 693 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 DDX60LQ5H9U9 1706 aaKnown RBP17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 SHOX2O60902 331 aaPredicted RBP17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 KRT9P35527 623 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 MAP2K2P36507 400 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 CRKP46108 304 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 IRAK1P51617 712 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 RILPL1Q5EBL4 403 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 TTC19Q6DKK2 380 aaPredicted RBP17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 USP17L2Q6R6M4 530 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 ANKRD20A12PQ8NF67 263 aa17.06■□□□□ 0.32
LRRTM1-201ENST00000295057 DLEC1Q9Y238 1755 aa17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 AKR1B1P15121 316 aa17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 SHROOM1Q2M3G4 852 aaPredicted RBP17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 DACT2Q5SW24 774 aa17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 TYW1BQ6NUM6 668 aa17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 ZNF579Q8NAF0 562 aaKnown RBP17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 TEKT1Q969V4 418 aa17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 SELENOOQ9BVL4 669 aa17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 FAM169AQ9Y6X4 670 aa17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 ITIH6Q6UXX5 1313 aa17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 SCG2P13521 617 aa17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 KRT2P35908 639 aa17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 CNKSR1Q969H4 720 aa17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 CRACR2AQ9BSW2 395 aa17.05■□□□□ 0.32
LRRTM1-201ENST00000295057 ZNF185O15231 689 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 NDUFA10O95299 355 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 NEDD1Q8NHV4 660 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 FAM76AQ8TAV0 307 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 RASGRP4Q8TDF6 673 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 ANKS1AQ92625 1134 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 EPN1Q9Y6I3 576 aaPredicted RBP17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 GOLGA6CA6NDK9 693 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 KIF1CO43896 1103 aaKnown RBP17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 GOLGA6DP0CG33 693 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 GRM4Q14833 912 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 MAP9Q49MG5 647 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 KCNV1Q6PIU1 500 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 TCP11L1Q9NUJ3 509 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 GOLGA6AQ9NYA3 693 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 SAR1BQ9Y6B6 198 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 SCN9AQ15858 1988 aa17.04■□□□□ 0.32
LRRTM1-201ENST00000295057 YDJCA8MPS7 323 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 PSMD14O00487 310 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 XBP1P17861 261 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 KIF5BP33176 963 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 NLRP5P59047 1200 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 PFKFB3Q16875 520 aaPredicted RBP17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 LRRC47Q8N1G4 583 aaKnown RBP17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 BLZF1Q9H2G9 400 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 VAT1LQ9HCJ6 419 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 SUGT1Q9Y2Z0 365 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 QSER1Q2KHR3 1735 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 MYH6P13533 1939 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 PDE2AO00408 941 aaPredicted RBP17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 ZNF174Q15697 407 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 SH3RF1Q7Z6J0 888 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 SYMPKQ92797 1274 aaKnown RBP17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 FAM107BQ9H098 131 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 SUFUQ9UMX1 484 aa17.03■□□□□ 0.32
LRRTM1-201ENST00000295057 USP17L5A8MUK1 530 aa17.02■□□□□ 0.32
LRRTM1-201ENST00000295057 HNRNPH1P31943 449 aaKnown RBP17.02■□□□□ 0.32
LRRTM1-201ENST00000295057 COPB1P53618 953 aaKnown RBP17.02■□□□□ 0.32
LRRTM1-201ENST00000295057 HERVK_113P62684 666 aa17.02■□□□□ 0.32
LRRTM1-201ENST00000295057 GABPAQ06546 454 aa17.02■□□□□ 0.32
LRRTM1-201ENST00000295057 PIK3AP1Q6ZUJ8 805 aa17.02■□□□□ 0.32
LRRTM1-201ENST00000295057 BCAS4Q8TDM0 211 aa17.02■□□□□ 0.32
LRRTM1-201ENST00000295057 TNFRSF25Q93038 417 aa17.02■□□□□ 0.32
LRRTM1-201ENST00000295057 SAMM50Q9Y512 469 aa17.02■□□□□ 0.32
LRRTM1-201ENST00000295057 MYH1P12882 1939 aa17.02■□□□□ 0.32
LRRTM1-201ENST00000295057 FRMPD2Q68DX3 1309 aaPredicted RBP17.02■□□□□ 0.32
LRRTM1-201ENST00000295057 EBAG9O00559 213 aa17.02■□□□□ 0.31
LRRTM1-201ENST00000295057 PPIP5K2O43314 1243 aa17.02■□□□□ 0.31
LRRTM1-201ENST00000295057 MRPS25P82663 173 aaKnown RBP17.02■□□□□ 0.31
LRRTM1-201ENST00000295057 STRIP1Q5VSL9 837 aa17.02■□□□□ 0.31
LRRTM1-201ENST00000295057 HHIPL2Q6UWX4 724 aa17.02■□□□□ 0.31
LRRTM1-201ENST00000295057 CCNI2Q6ZMN8 369 aaPredicted RBP17.02■□□□□ 0.31
LRRTM1-201ENST00000295057 UBA5Q9GZZ9 404 aa17.02■□□□□ 0.31
LRRTM1-201ENST00000295057 ZNF287Q9HBT7 754 aa17.02■□□□□ 0.31
LRRTM1-201ENST00000295057 LIMA1Q9UHB6 759 aaKnown RBP17.02■□□□□ 0.31
LRRTM1-201ENST00000295057 GRIN2DO15399 1336 aa17.01■□□□□ 0.31
LRRTM1-201ENST00000295057 PALM3A6NDB9 673 aaPredicted RBP17.01■□□□□ 0.31
LRRTM1-201ENST00000295057 GOLGA6BA6NDN3 693 aa17.01■□□□□ 0.31
LRRTM1-201ENST00000295057 KLRF2D3W0D1 207 aa17.01■□□□□ 0.31
LRRTM1-201ENST00000295057 DPEP1P16444 411 aa17.01■□□□□ 0.31
LRRTM1-201ENST00000295057 C2orf54Q08AI8 447 aa17.01■□□□□ 0.31
LRRTM1-201ENST00000295057 CCDC122Q5T0U0 273 aa17.01■□□□□ 0.31
LRRTM1-201ENST00000295057 RRP36Q96EU6 259 aaKnown RBP17.01■□□□□ 0.31
LRRTM1-201ENST00000295057 MAPK8IP1Q9UQF2 711 aa17.01■□□□□ 0.31
LRRTM1-201ENST00000295057 TTC26A0AVF1 554 aa17.01■□□□□ 0.31
LRRTM1-201ENST00000295057 MNAT1P51948 309 aa17.01■□□□□ 0.31
LRRTM1-201ENST00000295057 HEATR3Q7Z4Q2 680 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms