RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 LTBP3Q9NS15 1303 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 RASSF10A6NK89 507 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 MARSP56192 900 aaKnown RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 LRRC63Q05C16 580 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 RRP12Q5JTH9 1297 aaKnown RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 KRT25Q7Z3Z0 450 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 AFAP1L1Q8TED9 768 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 ZNF384Q8TF68 577 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 JAKMIP2Q96AA8 810 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 ZKSCAN3Q9BRR0 538 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 DCP1AQ9NPI6 582 aaPredicted RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 SRP68Q9UHB9 627 aaKnown RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 PUF60Q9UHX1 559 aaKnown RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 SNX12Q9UMY4 172 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 PASKQ96RG2 1323 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 PLIN4Q96Q06 1357 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 GRID2IPA4D2P6 1211 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 PALM3A6NDB9 673 aaPredicted RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 USO1O60763 962 aaKnown RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 IPO7O95373 1038 aaKnown RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 LMAN1P49257 510 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 STX17P56962 302 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 EHHADHQ08426 723 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 MIIPQ5JXC2 388 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 KLHL10Q6JEL2 608 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 LRRC31Q6UY01 552 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 PPM1EQ8WY54 764 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 FAM84BQ96KN1 310 aaPredicted RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 CHP1Q99653 195 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 SLF1Q9BQI6 1058 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 TUBGCP2Q9BSJ2 902 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 YY1AP1Q9H869 796 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 NHEJ1Q9H9Q4 299 aaPredicted RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 TAB2Q9NYJ8 693 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 FAN1Q9Y2M0 1017 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 LRRC37AA6NMS7 1700 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 GOLGB1Q14789 3259 aaKnown RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 BHMG1C9JSJ3 638 aaPredicted RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 NFKBIEO00221 500 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 CCT6AP40227 531 aaKnown RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 FXR2P51116 673 aaKnown RBP eCLIP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 PPFIA1Q13136 1202 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 PDIA5Q14554 519 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 ASTE1Q2TB18 679 aaPredicted RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 CCDC122Q5T0U0 273 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 CHADLQ6NUI6 762 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 CREG2Q8IUH2 290 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 ANKRD18AQ8IVF6 992 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 TEX2Q8IWB9 1127 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 ZC3H3Q8IXZ2 948 aaKnown RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 GUF1Q8N442 669 aaKnown RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 C3orf20Q8ND61 904 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 CCDC85AQ96PX6 553 aaPredicted RBP6.87□□□□□ -1.31
VCAM1-201ENST00000294728 TRIM9Q9C026 710 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 VPS16Q9H269 839 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 SH2D4AQ9H788 454 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 RIC8AQ9NPQ8 531 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 PCDHA6Q9UN73 950 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 SIK3Q9Y2K2 1263 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 PCDHA8Q9Y5H6 950 aa6.87□□□□□ -1.31
VCAM1-201ENST00000294728 OPA1O60313 960 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 RNF40O75150 1001 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 EPHB4P54760 987 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 KIF5AQ12840 1032 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 MCM6Q14566 821 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 PIK3AP1Q6ZUJ8 805 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 YTHDF3Q7Z739 585 aaKnown RBP6.86□□□□□ -1.31
VCAM1-201ENST00000294728 SUGP1Q8IWZ8 645 aaKnown RBP6.86□□□□□ -1.31
VCAM1-201ENST00000294728 ZNF287Q9HBT7 754 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 A0A0U1RQJ8 604 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 AGPSO00116 658 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 STXBP3O00186 592 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 TACC1O75410 805 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 ATP1A1P05023 1023 aaKnown RBP6.86□□□□□ -1.31
VCAM1-201ENST00000294728 FKBP15Q5T1M5 1219 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 C10orf76Q5T2E6 689 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 C12orf60Q5U649 245 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 PPP1R18Q6NYC8 613 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 SMYD4Q8IYR2 804 aaPredicted RBP6.86□□□□□ -1.31
VCAM1-201ENST00000294728 KCTD17Q8N5Z5 321 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 SDR42E1Q8WUS8 393 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 CPLX3Q8WVH0 158 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 ATRIPQ8WXE1 791 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 SECISBP2LQ93073 1101 aaKnown RBP6.86□□□□□ -1.31
VCAM1-201ENST00000294728 MMS19Q96T76 1030 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 FAM204AQ9H8W3 233 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 MAD2L2Q9UI95 211 aa6.86□□□□□ -1.31
VCAM1-201ENST00000294728 A0A087WUV0 522 aaPredicted RBP6.85□□□□□ -1.31
VCAM1-201ENST00000294728 MINDY4BA8MYZ0 360 aa6.85□□□□□ -1.31
VCAM1-201ENST00000294728 GNA11P29992 359 aa6.85□□□□□ -1.31
VCAM1-201ENST00000294728 UBA7P41226 1012 aa6.85□□□□□ -1.31
VCAM1-201ENST00000294728 NOP2P46087 812 aaKnown RBP6.85□□□□□ -1.31
VCAM1-201ENST00000294728 CTCFP49711 727 aaPredicted RBP6.85□□□□□ -1.31
VCAM1-201ENST00000294728 MAN2A1Q16706 1144 aa6.85□□□□□ -1.31
VCAM1-201ENST00000294728 HSP90AA4PQ58FG1 418 aa6.85□□□□□ -1.31
VCAM1-201ENST00000294728 DNAJC21Q5F1R6 531 aaKnown RBP6.85□□□□□ -1.31
VCAM1-201ENST00000294728 HYIQ5T013 277 aa6.85□□□□□ -1.31
VCAM1-201ENST00000294728 UNC13DQ70J99 1090 aa6.85□□□□□ -1.31
VCAM1-201ENST00000294728 TTLL6Q8N841 843 aa6.85□□□□□ -1.31
VCAM1-201ENST00000294728 MIGA1Q8NAN2 632 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms