RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 LARP4BQ92615 738 aaKnown RBP21.37■■□□□ 1.01
SHF-201ENST00000290894 CUEDC2Q9H467 287 aa21.37■■□□□ 1.01
SHF-201ENST00000290894 NKRFO15226 690 aaKnown RBP eCLIP21.37■■□□□ 1.01
SHF-201ENST00000290894 MYL1P05976 194 aa21.37■■□□□ 1.01
SHF-201ENST00000290894 IDEP14735 1019 aa21.37■■□□□ 1.01
SHF-201ENST00000290894 RSBN1LQ6PCB5 846 aaPredicted RBP21.37■■□□□ 1.01
SHF-201ENST00000290894 MIGA2Q7L4E1 593 aa21.37■■□□□ 1.01
SHF-201ENST00000290894 C7orf25Q9BPX7 421 aa21.37■■□□□ 1.01
SHF-201ENST00000290894 ZMYND15Q9H091 742 aa21.37■■□□□ 1.01
SHF-201ENST00000290894 H7C1D1 291 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 ENTPD3O75355 529 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 ZYXQ15942 572 aaKnown RBP21.36■■□□□ 1.01
SHF-201ENST00000290894 CCDC93Q567U6 631 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 KRT79Q5XKE5 535 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 PPP4R3AQ6IN85 833 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 TRIM65Q6PJ69 517 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 CSGALNACT2Q8N6G5 542 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 KIAA0895Q8NCT3 520 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 ANKRD20A12PQ8NF67 263 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 ACER1Q8TDN7 264 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 PCDHA12Q9UN75 941 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 ATF5Q9Y2D1 282 aaPredicted RBP21.36■■□□□ 1.01
SHF-201ENST00000290894 C10orf71Q711Q0 1435 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 LRRC10BA6NIK2 292 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 MFAP3LO75121 409 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 ERCC3P19447 782 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 HOXA13P31271 388 aaPredicted RBP21.36■■□□□ 1.01
SHF-201ENST00000290894 DLGAP5Q15398 846 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 ANKRD40Q6AI12 368 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 TTI2Q6NXR4 508 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 RAD9BQ6WBX8 426 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 LRRN4CLQ8ND94 238 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 ANO3Q9BYT9 981 aa21.36■■□□□ 1.01
SHF-201ENST00000290894 MEIS2O14770 477 aa21.35■■□□□ 1.01
SHF-201ENST00000290894 SSBP05455 408 aaKnown RBP eCLIP21.35■■□□□ 1.011e-6■■■■□ 21.2
SHF-201ENST00000290894 ETF1P62495 437 aaKnown RBP21.35■■□□□ 1.01
SHF-201ENST00000290894 KIAA1755Q5JYT7 1200 aa21.35■■□□□ 1.01
SHF-201ENST00000290894 PPP4R3BQ5MIZ7 849 aa21.35■■□□□ 1.01
SHF-201ENST00000290894 DUSP9Q99956 384 aaKnown RBP21.35■■□□□ 1.01
SHF-201ENST00000290894 RAB34Q9BZG1 259 aa21.35■■□□□ 1.01
SHF-201ENST00000290894 TMOD2Q9NZR1 351 aa21.35■■□□□ 1.01
SHF-201ENST00000290894 ATRNL1Q5VV63 1379 aa21.35■■□□□ 1.01
SHF-201ENST00000290894 ARFGEF1Q9Y6D6 1849 aa21.35■■□□□ 1.01
SHF-201ENST00000290894 KCNA3P22001 575 aa21.35■■□□□ 1.01
SHF-201ENST00000290894 STAT3P40763 770 aa21.35■■□□□ 1.01
SHF-201ENST00000290894 AMPD3Q01432 767 aa21.35■■□□□ 1.01
SHF-201ENST00000290894 SPAG1Q07617 926 aa21.35■■□□□ 1.01
SHF-201ENST00000290894 ORC2Q13416 577 aaPredicted RBP21.35■■□□□ 1.01
SHF-201ENST00000290894 GLIS3Q8NEA6 775 aa21.35■■□□□ 1.01
SHF-201ENST00000290894 TMEM39BQ9GZU3 492 aa21.35■■□□□ 1.01
SHF-201ENST00000290894 ZNF70Q9UC06 446 aaPredicted RBP21.35■■□□□ 1.01
SHF-201ENST00000290894 KIF2AO00139 706 aaPredicted RBP21.34■■□□□ 1.01
SHF-201ENST00000290894 ZSCAN12O43309 604 aa21.34■■□□□ 1.01
SHF-201ENST00000290894 NPM3O75607 178 aaKnown RBP21.34■■□□□ 1.01
SHF-201ENST00000290894 BMP3P12645 472 aa21.34■■□□□ 1.01
SHF-201ENST00000290894 CCDC84Q86UT8 332 aaPredicted RBP21.34■■□□□ 1.01
SHF-201ENST00000290894 OGFOD1Q8N543 542 aa21.34■■□□□ 1.01
SHF-201ENST00000290894 IRX2Q9BZI1 471 aaPredicted RBP21.34■■□□□ 1.01
SHF-201ENST00000290894 MAGEF1Q9HAY2 307 aa21.34■■□□□ 1.01
SHF-201ENST00000290894 SYDE2Q5VT97 1194 aa21.34■■□□□ 1.01
SHF-201ENST00000290894 P2RX5Q93086 422 aa21.34■■□□□ 1.01
SHF-201ENST00000290894 CCDC47Q96A33 483 aaKnown RBP21.34■■□□□ 1.01
SHF-201ENST00000290894 AMNQ9BXJ7 453 aa21.34■■□□□ 1.01
SHF-201ENST00000290894 MRPL44Q9H9J2 332 aaKnown RBP21.34■■□□□ 1.01
SHF-201ENST00000290894 RAD51AP2Q09MP3 1159 aa21.33■■□□□ 1.01
SHF-201ENST00000290894 LRRC41Q15345 812 aa21.33■■□□□ 1.01
SHF-201ENST00000290894 FBXO11Q86XK2 927 aa21.33■■□□□ 1.01
SHF-201ENST00000290894 RAD54LQ92698 747 aa21.33■■□□□ 1.01
SHF-201ENST00000290894 PANX2Q96RD6 677 aa21.33■■□□□ 1.01
SHF-201ENST00000290894 LZTFL1Q9NQ48 299 aa21.33■■□□□ 1.01
SHF-201ENST00000290894 SHTN1A0MZ66 631 aa21.33■■□□□ 1
SHF-201ENST00000290894 B4DLN1 442 aa21.33■■□□□ 1
SHF-201ENST00000290894 CCP110O43303 1012 aa21.33■■□□□ 1
SHF-201ENST00000290894 PDIA5Q14554 519 aa21.33■■□□□ 1
SHF-201ENST00000290894 PRR16Q569H4 304 aa21.33■■□□□ 1
SHF-201ENST00000290894 MTERF4Q7Z6M4 381 aaKnown RBP21.33■■□□□ 1
SHF-201ENST00000290894 GMCL1P1Q8NEA9 526 aa21.33■■□□□ 1
SHF-201ENST00000290894 DDX12PQ92771 950 aa21.33■■□□□ 1
SHF-201ENST00000290894 WDR24Q96S15 920 aa21.33■■□□□ 1
SHF-201ENST00000290894 CACNB1Q02641 598 aaPredicted RBP21.32■■□□□ 1
SHF-201ENST00000290894 E9PMD0 336 aa21.32■■□□□ 1
SHF-201ENST00000290894 RTKN2Q8IZC4 609 aa21.32■■□□□ 1
SHF-201ENST00000290894 DHTKD1Q96HY7 919 aaPredicted RBP21.32■■□□□ 1
SHF-201ENST00000290894 SEMA6BQ9H3T3 888 aa21.32■■□□□ 1
SHF-201ENST00000290894 MAGEC2Q9UBF1 373 aaPredicted RBP21.32■■□□□ 1
SHF-201ENST00000290894 STK17AQ9UEE5 414 aa21.32■■□□□ 1
SHF-201ENST00000290894 RGPD3A6NKT7 1758 aaPredicted RBP21.32■■□□□ 1
SHF-201ENST00000290894 RGPD4Q7Z3J3 1758 aa21.32■■□□□ 1
SHF-201ENST00000290894 CCNE1P24864 410 aa21.31■■□□□ 1
SHF-201ENST00000290894 GNG11P61952 73 aa21.31■■□□□ 1
SHF-201ENST00000290894 ARHGAP4P98171 946 aa21.31■■□□□ 1
SHF-201ENST00000290894 FCHSD1Q86WN1 690 aa21.31■■□□□ 1
SHF-201ENST00000290894 GMCL1Q96IK5 515 aa21.31■■□□□ 1
SHF-201ENST00000290894 TBC1D7Q9P0N9 293 aa21.31■■□□□ 1
SHF-201ENST00000290894 KIAA1024Q9UPX6 916 aa21.31■■□□□ 1
SHF-201ENST00000290894 POTEB3A0JP26 581 aa21.31■■□□□ 1
SHF-201ENST00000290894 POTECB2RU33 542 aa21.31■■□□□ 1
SHF-201ENST00000290894 VIL1P09327 827 aaKnown RBP21.31■■□□□ 1
SHF-201ENST00000290894 KLK7P49862 253 aa21.31■■□□□ 1
SHF-201ENST00000290894 FAM83BQ5T0W9 1011 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms