RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 DGKZQ13574 1117 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 CIAPIN1Q6FI81 312 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 TBC1D5Q92609 795 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 ASTN2O75129 1339 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-201ENST00000279247 CNTNAP1P78357 1384 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 TPM2P07951 284 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 CACNB1Q02641 598 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-201ENST00000279247 KRT31Q15323 416 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 ECM1Q16610 540 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 CEP135Q66GS9 1140 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 SAMD7Q7Z3H4 446 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 PNMA5Q96PV4 448 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 HERC5Q9UII4 1024 aaKnown RBP20.13■□□□□ 0.81
CAPN1-201ENST00000279247 MEIS2O14770 477 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 NR1I3Q14994 352 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 ARHGAP27Q6ZUM4 889 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 FEZ1Q99689 392 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 SRRTQ9BXP5 876 aaKnown RBP20.13■□□□□ 0.81
CAPN1-201ENST00000279247 RAB34Q9BZG1 259 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 CD2APQ9Y5K6 639 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 SPDYE3A6NKU9 549 aa20.12■□□□□ 0.81
CAPN1-201ENST00000279247 NPM3O75607 178 aaKnown RBP20.12■□□□□ 0.81
CAPN1-201ENST00000279247 FILIP1LQ4L180 1135 aa20.12■□□□□ 0.81
CAPN1-201ENST00000279247 PPP1R18Q6NYC8 613 aa20.12■□□□□ 0.81
CAPN1-201ENST00000279247 SV2BQ7L1I2 683 aa20.12■□□□□ 0.81
CAPN1-201ENST00000279247 RWDD2AQ9UIY3 292 aa20.12■□□□□ 0.81
CAPN1-201ENST00000279247 KCNJ18B7U540 433 aa20.12■□□□□ 0.81
CAPN1-201ENST00000279247 STAT2P52630 851 aa20.12■□□□□ 0.81
CAPN1-201ENST00000279247 KCNJ12Q14500 433 aa20.12■□□□□ 0.81
CAPN1-201ENST00000279247 TBC1D10BQ4KMP7 808 aaPredicted RBP20.12■□□□□ 0.81
CAPN1-201ENST00000279247 CYP2W1Q8TAV3 490 aa20.12■□□□□ 0.81
CAPN1-201ENST00000279247 A0A1B0GTH6 734 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 CDKAL1Q5VV42 579 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 PRAMEF18Q5VWM3 479 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 APTXQ7Z2E3 356 aaKnown RBP20.11■□□□□ 0.81
CAPN1-201ENST00000279247 LARP4BQ92615 738 aaKnown RBP20.11■□□□□ 0.81
CAPN1-201ENST00000279247 MYOZ2Q9NPC6 264 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 BLOC1S4Q9NUP1 217 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 TBC1D7Q9P0N9 293 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 FZD1Q9UP38 647 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 MYMKA6NI61 221 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 STIM1Q13586 685 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 RASA3Q14644 834 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 ADSSL1Q8N142 457 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 GMCL1P1Q8NEA9 526 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 DESI2Q9BSY9 194 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 SPON1Q9HCB6 807 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 ADD3Q9UEY8 706 aaKnown RBP20.11■□□□□ 0.81
CAPN1-201ENST00000279247 GREB1LQ9C091 1923 aaPredicted RBP20.11■□□□□ 0.81
CAPN1-201ENST00000279247 ARHGAP4P98171 946 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 GMCL1Q96IK5 515 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 ZHX3Q9H4I2 956 aa20.11■□□□□ 0.81
CAPN1-201ENST00000279247 ZNF646O15015 1829 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-201ENST00000279247 PSMA7O14818 248 aa20.1■□□□□ 0.81
CAPN1-201ENST00000279247 ZNF76P36508 570 aa20.1■□□□□ 0.81
CAPN1-201ENST00000279247 RBL2Q08999 1139 aa20.1■□□□□ 0.81
CAPN1-201ENST00000279247 LRRC41Q15345 812 aa20.1■□□□□ 0.81
CAPN1-201ENST00000279247 PPFIBP1Q86W92 1011 aa20.1■□□□□ 0.81
CAPN1-201ENST00000279247 CCDC47Q96A33 483 aaKnown RBP20.1■□□□□ 0.81
CAPN1-201ENST00000279247 PPP1R13BQ96KQ4 1090 aa20.1■□□□□ 0.81
CAPN1-201ENST00000279247 POLD4Q9HCU8 107 aa20.1■□□□□ 0.81
CAPN1-201ENST00000279247 TC2NQ8N9U0 490 aa20.1■□□□□ 0.81
CAPN1-201ENST00000279247 MYRIPQ8NFW9 859 aa20.1■□□□□ 0.81
CAPN1-201ENST00000279247 BAG1Q99933 345 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-201ENST00000279247 KIAA1024Q9UPX6 916 aa20.1■□□□□ 0.81
CAPN1-201ENST00000279247 POTEB3A0JP26 581 aa20.09■□□□□ 0.81
CAPN1-201ENST00000279247 POTECB2RU33 542 aa20.09■□□□□ 0.81
CAPN1-201ENST00000279247 E9PMD0 336 aa20.09■□□□□ 0.81
CAPN1-201ENST00000279247 FXR2P51116 673 aaKnown RBP eCLIP20.09■□□□□ 0.811e-6■■■□□ 14.6
CAPN1-201ENST00000279247 PPP4R3AQ6IN85 833 aa20.09■□□□□ 0.81
CAPN1-201ENST00000279247 POTEBQ6S5H4 581 aa20.09■□□□□ 0.81
CAPN1-201ENST00000279247 RHOBTB3O94955 611 aa20.09■□□□□ 0.81
CAPN1-201ENST00000279247 PRKCSHP14314 528 aaPredicted RBP20.09■□□□□ 0.81
CAPN1-201ENST00000279247 AMPD3Q01432 767 aa20.09■□□□□ 0.81
CAPN1-201ENST00000279247 MTF1Q14872 753 aa20.09■□□□□ 0.81
CAPN1-201ENST00000279247 NCAPH2Q6IBW4 605 aa20.09■□□□□ 0.81
CAPN1-201ENST00000279247 GLIS3Q8NEA6 775 aa20.09■□□□□ 0.81
CAPN1-201ENST00000279247 PRIMPOLQ96LW4 560 aa20.09■□□□□ 0.81
CAPN1-201ENST00000279247 MEIS1O00470 390 aa20.08■□□□□ 0.81
CAPN1-201ENST00000279247 TCP11X2Q5H9J9 407 aa20.08■□□□□ 0.81
CAPN1-201ENST00000279247 CSGALNACT2Q8N6G5 542 aa20.08■□□□□ 0.81
CAPN1-201ENST00000279247 ANKRD20A12PQ8NF67 263 aa20.08■□□□□ 0.81
CAPN1-201ENST00000279247 GOPCQ9HD26 462 aa20.08■□□□□ 0.81
CAPN1-201ENST00000279247 CASP14P31944 242 aa20.08■□□□□ 0.8
CAPN1-201ENST00000279247 COPB1P53618 953 aaKnown RBP20.08■□□□□ 0.8
CAPN1-201ENST00000279247 UBXN1Q04323 297 aa20.08■□□□□ 0.8
CAPN1-201ENST00000279247 GIMAP8Q8ND71 665 aaPredicted RBP20.08■□□□□ 0.8
CAPN1-201ENST00000279247 AGBL3Q8NEM8 1001 aa20.08■□□□□ 0.8
CAPN1-201ENST00000279247 ZNF341Q9BYN7 854 aa20.08■□□□□ 0.8
CAPN1-201ENST00000279247 NPHP3-ACAD11A0A0J9YXS1 232 aa20.08■□□□□ 0.8
CAPN1-201ENST00000279247 CYP4A11Q02928 519 aa20.08■□□□□ 0.8
CAPN1-201ENST00000279247 SYT10Q6XYQ8 523 aa20.08■□□□□ 0.8
CAPN1-201ENST00000279247 DDX12PQ92771 950 aa20.08■□□□□ 0.8
CAPN1-201ENST00000279247 FAM86B1E9PN63 330 aa20.07■□□□□ 0.8
CAPN1-201ENST00000279247 FAM86B2P0C5J1 330 aa20.07■□□□□ 0.8
CAPN1-201ENST00000279247 CPXCR1Q8N123 301 aa20.07■□□□□ 0.8
CAPN1-201ENST00000279247 CTAGE1Q96RT6 745 aa20.07■□□□□ 0.8
CAPN1-201ENST00000279247 TMX2Q9Y320 296 aa20.07■□□□□ 0.8
CAPN1-201ENST00000279247 OPLAHO14841 1288 aa20.07■□□□□ 0.8
CAPN1-201ENST00000279247 GRIPAP1Q4V328 841 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms