RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 TCP11Q8WWU5 503 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 RSRC1Q96IZ7 334 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 KRT12Q99456 494 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 SPATS2LQ9NUQ6 558 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 PANK4Q9NVE7 773 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 LRP6O75581 1613 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 IFIT3O14879 490 aaKnown RBP10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 ADAMTS3O15072 1205 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 BUB1O43683 1085 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 RPN1P04843 607 aaKnown RBP10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 TCP1P17987 556 aaKnown RBP10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 HSD17B3P37058 310 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 HSPA9P38646 679 aaKnown RBP10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 ZBED6P86452 979 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 ICA1Q05084 483 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 AP1ARQ63HQ0 302 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 MSL1Q68DK7 614 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 CACNA2D3Q8IZS8 1091 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 ADSSL1Q8N142 457 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 C1orf131Q8NDD1 294 aaKnown RBP10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 AGAP11Q8TF27 550 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 ACSBG1Q96GR2 724 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 L3MBTL3Q96JM7 780 aaPredicted RBP10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 TMEM87BQ96K49 555 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 SH3GL3Q99963 347 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 NEUROG2Q9H2A3 272 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 CEP131Q9UPN4 1083 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 TBC1D2BQ9UPU7 963 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 MAP3K13O43283 966 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 RAD51CO43502 376 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 GTPBP6O43824 516 aaPredicted RBP10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 IFFO1Q0D2I5 559 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 RTN1Q16799 776 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 DDX42Q86XP3 938 aaKnown RBP eCLIP10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 MDM1Q8TC05 714 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 LPIN2Q92539 896 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 NDST4Q9H3R1 872 aa10.15□□□□□ -0.78
HMGCLL1-201ENST00000274901 KAT6BQ8WYB5 2073 aa10.15□□□□□ -0.79
HMGCLL1-201ENST00000274901 MYH6P13533 1939 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 H7C1D1 291 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 IPO7O95373 1038 aaKnown RBP10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 ZFYP08048 801 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 CLTAP09496 248 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 LINGO3P0C6S8 592 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 FLT3P36888 993 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 EIF4A3P38919 411 aaKnown RBP10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 ABL2P42684 1182 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 ERVK-9P63128 1117 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 CAPRIN2Q6IMN6 1127 aaKnown RBP10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 CCDC42Q96M95 316 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 DUSP9Q99956 384 aaKnown RBP10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 YIPF3Q9GZM5 350 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 EPB41L4AQ9HCS5 686 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 KCNMB3Q9NPA1 279 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 PLCB1Q9NQ66 1216 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 EXOC1Q9NV70 894 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 PACSIN2Q9UNF0 486 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 AGAP1Q9UPQ3 857 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 MYBL1P10243 752 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 LIFRP42702 1097 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 MCAMP43121 646 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 KIF11P52732 1056 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 PTGDRQ13258 359 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 MIIPQ5JXC2 388 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 PNMA8AQ86V59 439 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 SPICE1Q8N0Z3 855 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 WASF1Q92558 559 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 PRCCQ92733 491 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 SPAG5Q96R06 1193 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 TUBGCP2Q9BSJ2 902 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 TSGA10Q9BZW7 698 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 MTFR1LQ9H019 292 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 KDM4CQ9H3R0 1056 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 PIH1D3Q9NQM4 214 aaKnown RBP10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 ZNHIT6Q9NWK9 470 aaKnown RBP10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 TJP1Q07157 1748 aa10.14□□□□□ -0.79
HMGCLL1-201ENST00000274901 AKAP11Q9UKA4 1901 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 LTBP4Q8N2S1 1624 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 A8MUI8 341 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 DIAPH2O60879 1101 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 DEXIO95424 95 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 PAEPP09466 180 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 EEF1GP26641 437 aaKnown RBP10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 ADD2P35612 726 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 PAFAH1B1P43034 410 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 DNM2P50570 870 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 RAB27AP51159 221 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 SPA17Q15506 151 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 PKN1Q16512 942 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 ARMC3Q5W041 872 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 TTI2Q6NXR4 508 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 TBC1D1Q86TI0 1168 aaPredicted RBP10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 C2CD5Q86YS7 1000 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 TRIM22Q8IYM9 498 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 C3orf20Q8ND61 904 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 SAAL1Q96ER3 474 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 TRIM47Q96LD4 638 aa10.13□□□□□ -0.79
HMGCLL1-201ENST00000274901 CCDC85AQ96PX6 553 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms