RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 ZBTB12Q9Y330 459 aaPredicted RBP8.66□□□□□ -1.02
LIMD1-201ENST00000273317 SPHKAPQ2M3C7 1700 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 MED7O43513 233 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 ATP2B4P23634 1241 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 EHHADHQ08426 723 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 ST13P4Q8IZP2 240 aaPredicted RBP8.66□□□□□ -1.02
LIMD1-201ENST00000273317 LRRC59Q96AG4 307 aaKnown RBP8.66□□□□□ -1.02
LIMD1-201ENST00000273317 CIAO1O76071 339 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 ADAM9Q13443 819 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 DPP8Q6V1X1 898 aaPredicted RBP8.66□□□□□ -1.02
LIMD1-201ENST00000273317 FANCBQ8NB91 859 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 GDAP1L1Q96MZ0 367 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 TEKT3Q9BXF9 490 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 ANAPC5Q9UJX4 755 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 CCNL1Q9UK58 526 aaPredicted RBP8.66□□□□□ -1.02
LIMD1-201ENST00000273317 JAG2Q9Y219 1238 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 CCDC151A5D8V7 595 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 DCAF15Q66K64 600 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 ST7Q9NRC1 585 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 GCFC2P16383 781 aaKnown RBP8.66□□□□□ -1.02
LIMD1-201ENST00000273317 NBPF9Q3BBW0 867 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 NIM1KQ8IY84 436 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 BBS5Q8N3I7 341 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 CXorf38Q8TB03 319 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 SYMPKQ92797 1274 aaKnown RBP8.66□□□□□ -1.02
LIMD1-201ENST00000273317 FAM89AQ96GI7 184 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 THAP9Q9H5L6 903 aa8.66□□□□□ -1.02
LIMD1-201ENST00000273317 GLG1Q92896 1179 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 CNOT6LQ96LI5 555 aaKnown RBP8.65□□□□□ -1.02
LIMD1-201ENST00000273317 TTC25Q96NG3 672 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 NT5C1BQ96P26 610 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 PTPRTO14522 1441 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 WDR17Q8IZU2 1322 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 ADCY2Q08462 1091 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 ASPRV1Q53RT3 343 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 CNPY4Q8N129 248 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 MRPL40Q9NQ50 206 aaKnown RBP8.65□□□□□ -1.02
LIMD1-201ENST00000273317 ARHGEF37A1IGU5 675 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 EMBQ6PCB8 327 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 TTC1Q99614 292 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 DAAM1Q9Y4D1 1078 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 MYO18AQ92614 2054 aaKnown RBP8.65□□□□□ -1.02
LIMD1-201ENST00000273317 RASGRF2O14827 1237 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 CFBP00751 764 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 EIF6P56537 245 aaKnown RBP8.65□□□□□ -1.02
LIMD1-201ENST00000273317 C8orf37Q96NL8 207 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 XPOTO43592 962 aaKnown RBP8.65□□□□□ -1.02
LIMD1-201ENST00000273317 ZNF189O75820 626 aaPredicted RBP8.65□□□□□ -1.02
LIMD1-201ENST00000273317 TMEM191BP0C7N4 346 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 PDE1BQ01064 536 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 PTK2Q05397 1052 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 NME8Q8N427 588 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 ZNF608Q9ULD9 1512 aaPredicted RBP8.65□□□□□ -1.02
LIMD1-201ENST00000273317 GPC4O75487 556 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 PRDM1O75626 825 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 PDE6AP16499 860 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 TMOD1P28289 359 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 LRMPQ12912 555 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 ATG16L1Q676U5 607 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 SSH3Q8TE77 659 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 JPH2Q9BR39 696 aaPredicted RBP8.65□□□□□ -1.02
LIMD1-201ENST00000273317 FAM96AQ9H5X1 160 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 FANCLQ9NW38 375 aa8.65□□□□□ -1.02
LIMD1-201ENST00000273317 APOEP02649 317 aa8.65□□□□□ -1.03
LIMD1-201ENST00000273317 GLE1Q53GS7 698 aaKnown RBP8.65□□□□□ -1.03
LIMD1-201ENST00000273317 FAM26FQ5R3K3 315 aa8.65□□□□□ -1.03
LIMD1-201ENST00000273317 OTUD7BQ6GQQ9 843 aa8.65□□□□□ -1.03
LIMD1-201ENST00000273317 PPP4R3CPQ6ZMV5 832 aa8.65□□□□□ -1.03
LIMD1-201ENST00000273317 QRICH2Q9H0J4 1663 aa8.65□□□□□ -1.03
LIMD1-201ENST00000273317 IPO5O00410 1097 aaKnown RBP8.65□□□□□ -1.03
LIMD1-201ENST00000273317 BUB1O43683 1085 aa8.65□□□□□ -1.03
LIMD1-201ENST00000273317 MSH2P43246 934 aa8.65□□□□□ -1.03
LIMD1-201ENST00000273317 ATP6V0A1Q93050 837 aa8.65□□□□□ -1.03
LIMD1-201ENST00000273317 DCTN3O75935 186 aa8.65□□□□□ -1.03
LIMD1-201ENST00000273317 POLR2FP61218 127 aaKnown RBP8.65□□□□□ -1.03
LIMD1-201ENST00000273317 PSMD2Q13200 908 aa8.65□□□□□ -1.03
LIMD1-201ENST00000273317 NSMFQ6X4W1 530 aa8.65□□□□□ -1.03
LIMD1-201ENST00000273317 G2E3Q7L622 706 aa8.65□□□□□ -1.03
LIMD1-201ENST00000273317 CACTINQ8WUQ7 758 aaKnown RBP8.65□□□□□ -1.03
LIMD1-201ENST00000273317 ABTB1Q969K4 478 aaPredicted RBP8.65□□□□□ -1.03
LIMD1-201ENST00000273317 GCNT4Q9P109 453 aa8.65□□□□□ -1.03
LIMD1-201ENST00000273317 ZFYVE16Q7Z3T8 1539 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 H7C0C1 242 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 SEMA3EO15041 775 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 ATP5OP48047 213 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 TFAP4Q01664 338 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 C6orf118Q5T5N4 469 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 SCYL3Q8IZE3 742 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 METTL13Q8N6R0 699 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 GPT2Q8TD30 523 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 TUBGCP2Q9BSJ2 902 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 DPH5Q9H2P9 285 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 MRPL46Q9H2W6 279 aaKnown RBP8.64□□□□□ -1.03
LIMD1-201ENST00000273317 PCDHA12Q9UN75 941 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 PCDHB4Q9Y5E5 795 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 ESYT2A0FGR8 921 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 SGK1O00141 431 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 GCP02774 474 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 ACTN1P12814 892 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 ALDH1B1P30837 517 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms