RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 FSCN1Q16658 493 aaKnown RBP10.59□□□□□ -0.71
TPM3-201ENST00000271850 TKFCQ3LXA3 575 aa10.59□□□□□ -0.71
TPM3-201ENST00000271850 ANKRD45Q5TZF3 282 aa10.59□□□□□ -0.71
TPM3-201ENST00000271850 ZNF454Q8N9F8 522 aa10.59□□□□□ -0.71
TPM3-201ENST00000271850 PPP1R13LQ8WUF5 828 aa10.59□□□□□ -0.71
TPM3-201ENST00000271850 EVI5LQ96CN4 794 aa10.59□□□□□ -0.71
TPM3-201ENST00000271850 NOC4LQ9BVI4 516 aaKnown RBP10.59□□□□□ -0.71
TPM3-201ENST00000271850 TRPV6Q9H1D0 765 aa10.59□□□□□ -0.71
TPM3-201ENST00000271850 ZNF576Q9H609 170 aa10.59□□□□□ -0.71
TPM3-201ENST00000271850 CCPG1Q9ULG6 757 aa10.59□□□□□ -0.71
TPM3-201ENST00000271850 ISY1Q9ULR0 285 aaKnown RBP10.59□□□□□ -0.71
TPM3-201ENST00000271850 YBX2Q9Y2T7 364 aaKnown RBP10.59□□□□□ -0.71
TPM3-201ENST00000271850 CTDP1Q9Y5B0 961 aaPredicted RBP10.59□□□□□ -0.71
TPM3-201ENST00000271850 NEDD4P46934 1319 aa10.58□□□□□ -0.71
TPM3-201ENST00000271850 MROH7Q68CQ1 1323 aa10.58□□□□□ -0.71
TPM3-201ENST00000271850 SCN10AQ9Y5Y9 1956 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 ASB14A6NK59 587 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 DYNC1LI2O43237 492 aaPredicted RBP10.58□□□□□ -0.72
TPM3-201ENST00000271850 SLC3A2P08195 630 aaKnown RBP10.58□□□□□ -0.72
TPM3-201ENST00000271850 SNHG28P0DPA3 235 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 PDHBP11177 359 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 ALDH5A1P51649 535 aaPredicted RBP10.58□□□□□ -0.72
TPM3-201ENST00000271850 HAND2P61296 217 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 IKQ13123 557 aaPredicted RBP10.58□□□□□ -0.72
TPM3-201ENST00000271850 PPIGQ13427 754 aaKnown RBP eCLIP10.58□□□□□ -0.724e-7■□□□□ 9.5
TPM3-201ENST00000271850 HDAC1Q13547 482 aaPredicted RBP10.58□□□□□ -0.72
TPM3-201ENST00000271850 ITGA7Q13683 1181 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 BAATQ14032 418 aaPredicted RBP10.58□□□□□ -0.72
TPM3-201ENST00000271850 LRRFIP1Q32MZ4 808 aaKnown RBP10.58□□□□□ -0.72
TPM3-201ENST00000271850 NSMFQ6X4W1 530 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 THSD4Q6ZMP0 1018 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 DCAF4Q8WV16 495 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 TIFAQ96CG3 184 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 CPVLQ9H3G5 476 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 HELLSQ9NRZ9 838 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 TCP11L1Q9NUJ3 509 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 ZMYM6O95789 1325 aa10.58□□□□□ -0.72
TPM3-201ENST00000271850 SCN5AQ14524 2016 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 TRANK1O15050 2925 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 RBM47A0AV96 593 aaKnown RBP10.57□□□□□ -0.72
TPM3-201ENST00000271850 ARIH2O95376 493 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 EDNRBP24530 442 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 CCL23P55773 120 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 CCDC96Q2M329 555 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 DUSP28Q4G0W2 176 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 MCMDC2Q4G0Z9 681 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 SYDE2Q5VT97 1194 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 HERVK_113Q902F9 699 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 COPS5Q92905 334 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 VTI1AQ96AJ9 217 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 IL25Q9H293 177 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 HIPK3Q9H422 1215 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 SPC25Q9HBM1 224 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 VTA1Q9NP79 307 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 GPCPD1Q9NPB8 672 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 IL23AQ9NPF7 189 aa10.57□□□□□ -0.72
TPM3-201ENST00000271850 TRMT13Q9NUP7 481 aaKnown RBP10.57□□□□□ -0.72
TPM3-201ENST00000271850 MYO9BQ13459 2157 aa10.56□□□□□ -0.72
TPM3-201ENST00000271850 LAMA4Q16363 1823 aa10.56□□□□□ -0.72
TPM3-201ENST00000271850 TOP1P11387 765 aaKnown RBP10.56□□□□□ -0.72
TPM3-201ENST00000271850 PURAQ00577 322 aaKnown RBP10.56□□□□□ -0.72
TPM3-201ENST00000271850 ZNF543Q08ER8 600 aa10.56□□□□□ -0.72
TPM3-201ENST00000271850 RRP12Q5JTH9 1297 aaKnown RBP10.56□□□□□ -0.72
TPM3-201ENST00000271850 IQSEC1Q6DN90 963 aa10.56□□□□□ -0.72
TPM3-201ENST00000271850 KIAA1211Q6ZU35 1233 aa10.56□□□□□ -0.72
TPM3-201ENST00000271850 NOL8Q76FK4 1167 aaKnown RBP10.56□□□□□ -0.72
TPM3-201ENST00000271850 TMEM199Q8N511 208 aa10.56□□□□□ -0.72
TPM3-201ENST00000271850 WNT2BQ93097 391 aa10.56□□□□□ -0.72
TPM3-201ENST00000271850 SCLYQ96I15 445 aa10.56□□□□□ -0.72
TPM3-201ENST00000271850 CTAGE1Q96RT6 745 aa10.56□□□□□ -0.72
TPM3-201ENST00000271850 LNPKQ9C0E8 428 aa10.56□□□□□ -0.72
TPM3-201ENST00000271850 ALDH8A1Q9H2A2 487 aaPredicted RBP10.56□□□□□ -0.72
TPM3-201ENST00000271850 PRDM12Q9H4Q4 367 aa10.56□□□□□ -0.72
TPM3-201ENST00000271850 Q9Y3F1 56 aa10.56□□□□□ -0.72
TPM3-201ENST00000271850 CCDC171Q6TFL3 1326 aa10.56□□□□□ -0.72
TPM3-201ENST00000271850 CABYRO75952 493 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 ARHGEF15O94989 841 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 IGHDP01880 384 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 CYP2C9P11712 490 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 MYOGP15173 224 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 RABGGTBP53611 331 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 RPS6P62753 249 aaKnown RBP10.55□□□□□ -0.72
TPM3-201ENST00000271850 AKNAD1Q5T1N1 836 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 PSRC1Q6PGN9 363 aaPredicted RBP10.55□□□□□ -0.72
TPM3-201ENST00000271850 OTOP2Q7RTS6 562 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 SMC5Q8IY18 1101 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 TBC1D5Q92609 795 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 ZKSCAN3Q9BRR0 538 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 WDR11Q9BZH6 1224 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 NKX2-4Q9H2Z4 354 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 COL20A1Q9P218 1284 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 TET1Q8NFU7 2136 aa10.55□□□□□ -0.72
TPM3-201ENST00000271850 PTPDC1A2A3K4 754 aa10.54□□□□□ -0.72
TPM3-201ENST00000271850 TLR3O15455 904 aaKnown RBP10.54□□□□□ -0.72
TPM3-201ENST00000271850 GOLGA8HP0CJ92 632 aa10.54□□□□□ -0.72
TPM3-201ENST00000271850 CALML3P27482 149 aa10.54□□□□□ -0.72
TPM3-201ENST00000271850 TTLL4Q14679 1199 aa10.54□□□□□ -0.72
TPM3-201ENST00000271850 PLEKHM2Q8IWE5 1019 aa10.54□□□□□ -0.72
TPM3-201ENST00000271850 OXER1Q8TDS5 423 aa10.54□□□□□ -0.72
TPM3-201ENST00000271850 UBA5Q9GZZ9 404 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms