RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CCDC24Q8N4L8 307 aa30.52■■■□□ 2.48
CBX4-201ENST00000269397 LIG3P49916 1009 aa30.51■■■□□ 2.48
CBX4-201ENST00000269397 NAPAP54920 295 aa30.51■■■□□ 2.48
CBX4-201ENST00000269397 NAP1L1P55209 391 aaKnown RBP30.51■■■□□ 2.48
CBX4-201ENST00000269397 RASSF7Q02833 373 aa30.51■■■□□ 2.48
CBX4-201ENST00000269397 MMTAG2Q9BU76 263 aaKnown RBP30.51■■■□□ 2.48
CBX4-201ENST00000269397 RBM12Q9NTZ6 932 aaKnown RBP30.51■■■□□ 2.48
CBX4-201ENST00000269397 XIRP1Q702N8 1843 aaKnown RBP30.51■■■□□ 2.48
CBX4-201ENST00000269397 PRPHP41219 470 aa30.51■■■□□ 2.47
CBX4-201ENST00000269397 MAGEA1P43355 309 aa30.51■■■□□ 2.47
CBX4-201ENST00000269397 TADA2BQ86TJ2 420 aa30.51■■■□□ 2.47
CBX4-201ENST00000269397 STIM2Q9P246 746 aa30.51■■■□□ 2.47
CBX4-201ENST00000269397 HYOU1Q9Y4L1 999 aa30.51■■■□□ 2.47
CBX4-201ENST00000269397 SAMM50Q9Y512 469 aa30.51■■■□□ 2.47
CBX4-201ENST00000269397 TSPY3P0CV98 308 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 TSPY8P0CW00 308 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 HIBADHP31937 336 aaKnown RBP30.5■■■□□ 2.47
CBX4-201ENST00000269397 TTMPQ5BVD1 217 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 KCTD16Q68DU8 428 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 TXNRD3Q86VQ6 643 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 GRIN2DO15399 1336 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 LAD1O00515 517 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 SH2D3CQ8N5H7 860 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 MTMR8Q96EF0 704 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 ALS2CR12Q96Q35 445 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 CUEDC2Q9H467 287 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 VAT1LQ9HCJ6 419 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 MYH14Q7Z406 1995 aaKnown RBP30.5■■■□□ 2.47
CBX4-201ENST00000269397 TXKP42681 527 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 CNNM4Q6P4Q7 775 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 DAGLBQ8NCG7 672 aa30.5■■■□□ 2.47
CBX4-201ENST00000269397 ESYT3A0FGR9 886 aa30.49■■■□□ 2.47
CBX4-201ENST00000269397 ZSCAN5CA6NGD5 496 aaPredicted RBP30.49■■■□□ 2.47
CBX4-201ENST00000269397 C12orf60Q5U649 245 aa30.49■■■□□ 2.47
CBX4-201ENST00000269397 ICE2Q659A1 982 aa30.49■■■□□ 2.47
CBX4-201ENST00000269397 DZIP1Q86YF9 867 aaKnown RBP30.49■■■□□ 2.47
CBX4-201ENST00000269397 FAM169AQ9Y6X4 670 aa30.49■■■□□ 2.47
CBX4-201ENST00000269397 MYH1P12882 1939 aa30.49■■■□□ 2.47
CBX4-201ENST00000269397 EBAG9O00559 213 aa30.49■■■□□ 2.47
CBX4-201ENST00000269397 HNRNPH3P31942 346 aaKnown RBP30.49■■■□□ 2.47
CBX4-201ENST00000269397 CENPPQ6IPU0 288 aa30.49■■■□□ 2.47
CBX4-201ENST00000269397 GLIS3Q8NEA6 775 aa30.49■■■□□ 2.47
CBX4-201ENST00000269397 SLC1A4P43007 532 aa30.48■■■□□ 2.47
CBX4-201ENST00000269397 C8orf74Q6P047 294 aa30.48■■■□□ 2.47
CBX4-201ENST00000269397 POTEDQ86YR6 584 aa30.48■■■□□ 2.47
CBX4-201ENST00000269397 AK8Q96MA6 479 aa30.48■■■□□ 2.47
CBX4-201ENST00000269397 RUFY1Q96T51 708 aa30.48■■■□□ 2.47
CBX4-201ENST00000269397 TMEM47Q9BQJ4 181 aa30.48■■■□□ 2.47
CBX4-201ENST00000269397 TLR10Q9BXR5 811 aa30.48■■■□□ 2.47
CBX4-201ENST00000269397 KLRF2D3W0D1 207 aa30.48■■■□□ 2.47
CBX4-201ENST00000269397 EIF3HO15372 352 aaKnown RBP eCLIP30.48■■■□□ 2.47
CBX4-201ENST00000269397 KRT14P02533 472 aa30.48■■■□□ 2.47
CBX4-201ENST00000269397 TCP1P17987 556 aaKnown RBP30.48■■■□□ 2.47
CBX4-201ENST00000269397 ATP1A2P50993 1020 aa30.48■■■□□ 2.47
CBX4-201ENST00000269397 EPHB4P54760 987 aa30.48■■■□□ 2.47
CBX4-201ENST00000269397 LRRC41Q15345 812 aa30.48■■■□□ 2.47
CBX4-201ENST00000269397 SH3GL2Q99962 352 aa30.48■■■□□ 2.47
CBX4-201ENST00000269397 SMCO2A6NFE2 343 aa30.47■■■□□ 2.47
CBX4-201ENST00000269397 MYMKA6NI61 221 aa30.47■■■□□ 2.47
CBX4-201ENST00000269397 GNAQP50148 359 aa30.47■■■□□ 2.47
CBX4-201ENST00000269397 NONOQ15233 471 aaKnown RBP eCLIP30.47■■■□□ 2.471e-9■■■□□ 18.4
CBX4-201ENST00000269397 MAGEF1Q9HAY2 307 aa30.47■■■□□ 2.47
CBX4-201ENST00000269397 NLRC4Q9NPP4 1024 aa30.47■■■□□ 2.47
CBX4-201ENST00000269397 PAFAH1B1P43034 410 aa30.47■■■□□ 2.47
CBX4-201ENST00000269397 AMPD3Q01432 767 aa30.47■■■□□ 2.47
CBX4-201ENST00000269397 PDCLQ13371 301 aa30.47■■■□□ 2.47
CBX4-201ENST00000269397 ZNF572Q7Z3I7 529 aaPredicted RBP30.47■■■□□ 2.47
CBX4-201ENST00000269397 SH3RF3Q8TEJ3 882 aaPredicted RBP30.47■■■□□ 2.47
CBX4-201ENST00000269397 TANGO6Q9C0B7 1094 aa30.47■■■□□ 2.47
CBX4-201ENST00000269397 BIN2Q9UBW5 565 aaPredicted RBP30.47■■■□□ 2.47
CBX4-201ENST00000269397 A0A087WUV0 522 aaPredicted RBP30.46■■■□□ 2.47
CBX4-201ENST00000269397 GOLGA8KD6RF30 607 aa30.46■■■□□ 2.47
CBX4-201ENST00000269397 GTF2A1P52655 376 aaPredicted RBP30.46■■■□□ 2.47
CBX4-201ENST00000269397 KCNQ4P56696 695 aa30.46■■■□□ 2.47
CBX4-201ENST00000269397 TMED8Q6PL24 325 aaPredicted RBP30.46■■■□□ 2.47
CBX4-201ENST00000269397 SAP30BPQ9UHR5 308 aaKnown RBP30.46■■■□□ 2.47
CBX4-201ENST00000269397 SCN7AQ01118 1682 aa30.46■■■□□ 2.47
CBX4-201ENST00000269397 LAMB1P07942 1786 aa30.46■■■□□ 2.47
CBX4-201ENST00000269397 PRLRP16471 622 aa30.46■■■□□ 2.47
CBX4-201ENST00000269397 SF3B3Q15393 1217 aaKnown RBP30.46■■■□□ 2.47
CBX4-201ENST00000269397 TDRD12Q587J7 1177 aaKnown RBP30.46■■■□□ 2.47
CBX4-201ENST00000269397 SLC51AQ86UW1 340 aa30.46■■■□□ 2.47
CBX4-201ENST00000269397 TBCKQ8TEA7 893 aa30.46■■■□□ 2.47
CBX4-201ENST00000269397 ZIM3Q96PE6 472 aa30.46■■■□□ 2.47
CBX4-201ENST00000269397 CASZ1Q86V15 1759 aa30.45■■■□□ 2.47
CBX4-201ENST00000269397 HSF2BPO75031 334 aa30.45■■■□□ 2.47
CBX4-201ENST00000269397 RNASE9P60153 205 aaKnown RBP30.45■■■□□ 2.47
CBX4-201ENST00000269397 IFT81Q8WYA0 676 aa30.45■■■□□ 2.47
CBX4-201ENST00000269397 BAP1Q92560 729 aa30.45■■■□□ 2.47
CBX4-201ENST00000269397 CALML4Q96GE6 196 aa30.45■■■□□ 2.47
CBX4-201ENST00000269397 TMEM260Q9NX78 707 aa30.45■■■□□ 2.47
CBX4-201ENST00000269397 KIAA1551Q9HCM1 1747 aa30.45■■■□□ 2.46
CBX4-201ENST00000269397 OPA1O60313 960 aa30.45■■■□□ 2.46
CBX4-201ENST00000269397 GLI1P08151 1106 aa30.45■■■□□ 2.46
CBX4-201ENST00000269397 FAM153BP0C7A2 387 aa30.45■■■□□ 2.46
CBX4-201ENST00000269397 FAM153CQ494X1 144 aa30.45■■■□□ 2.46
CBX4-201ENST00000269397 KLHDC7AQ5VTJ3 777 aa30.45■■■□□ 2.46
CBX4-201ENST00000269397 GALNT17Q6IS24 598 aa30.45■■■□□ 2.46
CBX4-201ENST00000269397 SV2BQ7L1I2 683 aa30.45■■■□□ 2.46
CBX4-201ENST00000269397 CACNA2D4Q7Z3S7 1137 aa30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms