RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 GCFC2P16383 781 aaKnown RBP17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 TROAPQ12815 778 aa17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 CEP57Q86XR8 500 aa17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 CCDC50Q8IVM0 306 aa17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 FUKQ8N0W3 1084 aa17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 ARFGAP2Q8N6H7 521 aa17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 HELBQ8NG08 1087 aaPredicted RBP17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 NOX5Q96PH1 765 aa17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 KBTBD4Q9NVX7 518 aa17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 COL22A1Q8NFW1 1626 aaPredicted RBP17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 PP2D1A8MPX8 630 aa17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 EPHB6O15197 1021 aa17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 NKRFO15226 690 aaKnown RBP eCLIP17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 IBSPP21815 317 aaPredicted RBP17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 MRPL12P52815 198 aaKnown RBP17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 C3orf20Q8ND61 904 aa17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 TMBIM4Q9HC24 238 aa17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 DDX20Q9UHI6 824 aaKnown RBP17.05■□□□□ 0.32
SCAMP2-201ENST00000268099 GOLGA6L10A6NI86 522 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 CALM1P0DP23 149 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 CALM2P0DP24 149 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 CALM3P0DP25 149 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 FGFR2P21802 821 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 FAM228AQ86W67 206 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 SGSM3Q96HU1 749 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 PLIN2Q99541 437 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 OSBPL7Q9BZF2 842 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 FAM207AQ9NSI2 230 aaPredicted RBP17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 PAPPAQ13219 1627 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 CCDC189A1A4V9 331 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 GMNCA6NCL1 334 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 BUB1O43683 1085 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 HSPA9P38646 679 aaKnown RBP17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 SPRED3Q2MJR0 410 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 KIF6Q6ZMV9 814 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 MAGEC3Q8TD91 643 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 KRT12Q99456 494 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 SIK3Q9Y2K2 1263 aa17.04■□□□□ 0.32
SCAMP2-201ENST00000268099 DLEC1Q9Y238 1755 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 DNM1LO00429 736 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 SCG2P13521 617 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 RASSF7Q02833 373 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 CHRNA2Q15822 529 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 ANKRD20A8PQ5CZ79 823 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 GPIHBP1Q8IV16 184 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 SRBD1Q8N5C6 995 aaKnown RBP17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 HAUS2Q9NVX0 235 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 ANAPC4Q9UJX5 808 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 MYH1P12882 1939 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 DUOX1Q9NRD9 1551 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 LRRC53A6NM62 1247 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 SSBP05455 408 aaKnown RBP eCLIP17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 TRADDQ15628 312 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 DTHD1Q6ZMT9 781 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 RNF10Q8N5U6 811 aaKnown RBP17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 SDR42E1Q8WUS8 393 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 PLCB1Q9NQ66 1216 aa17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 TPX2Q9ULW0 747 aaKnown RBP17.03■□□□□ 0.32
SCAMP2-201ENST00000268099 SNAP23O00161 211 aa17.02■□□□□ 0.32
SCAMP2-201ENST00000268099 DDAH1O94760 285 aa17.02■□□□□ 0.32
SCAMP2-201ENST00000268099 EZRP15311 586 aaKnown RBP17.02■□□□□ 0.32
SCAMP2-201ENST00000268099 UBA7P41226 1012 aa17.02■□□□□ 0.32
SCAMP2-201ENST00000268099 SLC1A4P43007 532 aa17.02■□□□□ 0.32
SCAMP2-201ENST00000268099 LRIG3Q6UXM1 1119 aa17.02■□□□□ 0.32
SCAMP2-201ENST00000268099 RRAGAQ7L523 313 aa17.02■□□□□ 0.32
SCAMP2-201ENST00000268099 SCLT1Q96NL6 688 aa17.02■□□□□ 0.32
SCAMP2-201ENST00000268099 GRID2IPA4D2P6 1211 aa17.02■□□□□ 0.31
SCAMP2-201ENST00000268099 GCOM1H8Y6P7 765 aaPredicted RBP17.02■□□□□ 0.31
SCAMP2-201ENST00000268099 TRAPPC3O43617 180 aa17.02■□□□□ 0.31
SCAMP2-201ENST00000268099 MYZAPP0CAP1 466 aa17.02■□□□□ 0.31
SCAMP2-201ENST00000268099 SLC5A1P13866 664 aa17.02■□□□□ 0.31
SCAMP2-201ENST00000268099 GFPT1Q06210 699 aaPredicted RBP17.02■□□□□ 0.31
SCAMP2-201ENST00000268099 PDE4DQ08499 809 aa17.02■□□□□ 0.31
SCAMP2-201ENST00000268099 CDC37Q16543 378 aaPredicted RBP17.02■□□□□ 0.31
SCAMP2-201ENST00000268099 QPCTQ16769 361 aa17.02■□□□□ 0.31
SCAMP2-201ENST00000268099 CCDC178Q5BJE1 867 aa17.02■□□□□ 0.31
SCAMP2-201ENST00000268099 LRRC15Q8TF66 581 aa17.02■□□□□ 0.31
SCAMP2-201ENST00000268099 CCDC47Q96A33 483 aaKnown RBP17.02■□□□□ 0.31
SCAMP2-201ENST00000268099 SLC12A6Q9UHW9 1150 aa17.02■□□□□ 0.31
SCAMP2-201ENST00000268099 DNA2P51530 1060 aa17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 STK4Q13043 487 aa17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 VWA3BQ502W6 1294 aa17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 TEX11Q8IYF3 940 aa17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 MMRN2Q9H8L6 949 aa17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 ERVV-2B6SEH9 535 aa17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 ZPR1O75312 459 aa17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 VEGFAP15692 232 aaPredicted RBP17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 SATB1Q01826 763 aa17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 CRYMQ14894 314 aa17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 PFKFB3Q16875 520 aaPredicted RBP17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 ASTE1Q2TB18 679 aaPredicted RBP17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 NLRP10Q86W26 655 aa17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 SEC16BQ96JE7 1060 aa17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 CCSER1Q9C0I3 900 aa17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 NDST4Q9H3R1 872 aa17.01■□□□□ 0.31
SCAMP2-201ENST00000268099 MROH5Q6ZUA9 1318 aa17■□□□□ 0.31
SCAMP2-201ENST00000268099 IRS4O14654 1257 aaPredicted RBP17■□□□□ 0.31
SCAMP2-201ENST00000268099 FAXDC2Q96IV6 333 aa17■□□□□ 0.31
SCAMP2-201ENST00000268099 LEMD3Q9Y2U8 911 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms