RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 NAALADL2Q58DX5 795 aa18.49■□□□□ 0.55
TPM1-201ENST00000267996 SAMD1Q6SPF0 538 aaPredicted RBP18.49■□□□□ 0.55
TPM1-201ENST00000267996 LUZP1Q86V48 1076 aa18.49■□□□□ 0.55
TPM1-201ENST00000267996 PNMA8AQ86V59 439 aaPredicted RBP18.49■□□□□ 0.55
TPM1-201ENST00000267996 GRAMD1CQ8IYS0 662 aa18.49■□□□□ 0.55
TPM1-201ENST00000267996 REPS2Q8NFH8 660 aa18.49■□□□□ 0.55
TPM1-201ENST00000267996 BPIFA3Q9BQP9 254 aa18.49■□□□□ 0.55
TPM1-201ENST00000267996 MMTAG2Q9BU76 263 aaKnown RBP18.49■□□□□ 0.55
TPM1-201ENST00000267996 TMOD4Q9NZQ9 345 aa18.49■□□□□ 0.55
TPM1-201ENST00000267996 BIN1O00499 593 aa18.48■□□□□ 0.55
TPM1-201ENST00000267996 VWA5AO00534 786 aa18.48■□□□□ 0.55
TPM1-201ENST00000267996 DSG3P32926 999 aa18.48■□□□□ 0.55
TPM1-201ENST00000267996 NF2P35240 595 aa18.48■□□□□ 0.55
TPM1-201ENST00000267996 TMEM266Q2M3C6 531 aa18.48■□□□□ 0.55
TPM1-201ENST00000267996 CATSPERGQ6ZRH7 1159 aa18.48■□□□□ 0.55
TPM1-201ENST00000267996 CABP7Q86V35 215 aa18.48■□□□□ 0.55
TPM1-201ENST00000267996 SAMD3Q8N6K7 520 aa18.48■□□□□ 0.55
TPM1-201ENST00000267996 LENG9Q96B70 501 aa18.48■□□□□ 0.55
TPM1-201ENST00000267996 NAT10Q9H0A0 1025 aaKnown RBP18.48■□□□□ 0.55
TPM1-201ENST00000267996 MAN1B1Q9UKM7 699 aa18.48■□□□□ 0.55
TPM1-201ENST00000267996 TBX3O15119 743 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 DPYDQ12882 1025 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 TRIML1Q8N9V2 468 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 SMARCE1Q969G3 411 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 ATG4CQ96DT6 458 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 MTRQ99707 1265 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 RAB34Q9BZG1 259 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 RAVER2Q9HCJ3 691 aaKnown RBP18.47■□□□□ 0.55
TPM1-201ENST00000267996 CCDC39Q9UFE4 941 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 MYPNQ86TC9 1320 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 PTPRFP10586 1907 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 SMC2O95347 1197 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 STAT6P42226 847 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 OAZ1P54368 228 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 MORC3Q14149 939 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 COG2Q14746 738 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 RRAGBQ5VZM2 374 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 FCHSD1Q86WN1 690 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 MCF2L2Q86YR7 1114 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 ANKRD13AQ8IZ07 590 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 ETNPPLQ8TBG4 499 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 CUEDC2Q9H467 287 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 TTC12Q9H892 705 aaPredicted RBP18.47■□□□□ 0.55
TPM1-201ENST00000267996 MAP3K20Q9NYL2 800 aaKnown RBP18.47■□□□□ 0.55
TPM1-201ENST00000267996 LRWD1Q9UFC0 647 aa18.47■□□□□ 0.55
TPM1-201ENST00000267996 GTPBP6O43824 516 aaPredicted RBP18.46■□□□□ 0.55
TPM1-201ENST00000267996 BMP6P22004 513 aa18.46■□□□□ 0.55
TPM1-201ENST00000267996 AFMP43652 599 aa18.46■□□□□ 0.55
TPM1-201ENST00000267996 PPATQ06203 517 aa18.46■□□□□ 0.55
TPM1-201ENST00000267996 EAPPQ56P03 285 aaPredicted RBP18.46■□□□□ 0.55
TPM1-201ENST00000267996 ERO1BQ86YB8 467 aa18.46■□□□□ 0.55
TPM1-201ENST00000267996 DHX40Q8IX18 779 aaKnown RBP18.46■□□□□ 0.55
TPM1-201ENST00000267996 CPXCR1Q8N123 301 aa18.46■□□□□ 0.55
TPM1-201ENST00000267996 EHMT1Q9H9B1 1298 aa18.46■□□□□ 0.55
TPM1-201ENST00000267996 MAGEF1Q9HAY2 307 aa18.46■□□□□ 0.55
TPM1-201ENST00000267996 FAM86B1E9PN63 330 aa18.45■□□□□ 0.54
TPM1-201ENST00000267996 NFIBO00712 420 aa18.45■□□□□ 0.54
TPM1-201ENST00000267996 ATP2A1O14983 1001 aa18.45■□□□□ 0.54
TPM1-201ENST00000267996 FAM86B2P0C5J1 330 aa18.45■□□□□ 0.54
TPM1-201ENST00000267996 SLFN12Q8IYM2 578 aa18.45■□□□□ 0.54
TPM1-201ENST00000267996 LRRC15Q8TF66 581 aa18.45■□□□□ 0.54
TPM1-201ENST00000267996 CNKSR2Q8WXI2 1034 aa18.45■□□□□ 0.54
TPM1-201ENST00000267996 WNK4Q96J92 1243 aa18.45■□□□□ 0.54
TPM1-201ENST00000267996 GSDMAQ96QA5 445 aa18.45■□□□□ 0.54
TPM1-201ENST00000267996 PCDHA12Q9UN75 941 aa18.45■□□□□ 0.54
TPM1-201ENST00000267996 IGLV3-22A0A075B6J6 115 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 SPDYE5A6NIY4 337 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 AP5Z1O43299 807 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 SLC26A4O43511 780 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 ALAS1P13196 640 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 PLCG1P19174 1290 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 PRR16Q569H4 304 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 FAM20AQ96MK3 541 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 KBTBD4Q9NVX7 518 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 CTDP1Q9Y5B0 961 aaPredicted RBP18.44■□□□□ 0.54
TPM1-201ENST00000267996 RPTORQ8N122 1335 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 CXCL11O14625 94 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 MYL1P05976 194 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 GRB10Q13322 594 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 MUM1L1Q5H9M0 696 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 ISM2Q6H9L7 571 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 MOB2Q70IA6 237 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 CLMNQ96JQ2 1002 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 ELP3Q9H9T3 547 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 HOXC10Q9NYD6 342 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 COL20A1Q9P218 1284 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 ZNF214Q9UL59 606 aaPredicted RBP18.44■□□□□ 0.54
TPM1-201ENST00000267996 RABGAP1Q9Y3P9 1069 aa18.44■□□□□ 0.54
TPM1-201ENST00000267996 COL11A1P12107 1806 aaPredicted RBP18.43■□□□□ 0.54
TPM1-201ENST00000267996 LOC285556D6RIA3 1793 aa18.43■□□□□ 0.54
TPM1-201ENST00000267996 FRMPD4Q14CM0 1322 aa18.43■□□□□ 0.54
TPM1-201ENST00000267996 A0A0G2JLL6 359 aaPredicted RBP18.43■□□□□ 0.54
TPM1-201ENST00000267996 POTEMA6NI47 508 aa18.43■□□□□ 0.54
TPM1-201ENST00000267996 MARCH6O60337 910 aa18.43■□□□□ 0.54
TPM1-201ENST00000267996 HYIQ5T013 277 aa18.43■□□□□ 0.54
TPM1-201ENST00000267996 LDLRAD1Q5T700 205 aa18.43■□□□□ 0.54
TPM1-201ENST00000267996 PRRT2Q7Z6L0 340 aaPredicted RBP18.43■□□□□ 0.54
TPM1-201ENST00000267996 MLKLQ8NB16 471 aa18.43■□□□□ 0.54
TPM1-201ENST00000267996 RASSF8Q8NHQ8 419 aa18.43■□□□□ 0.54
TPM1-201ENST00000267996 CALML4Q96GE6 196 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms