RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ADD3Q9UEY8 706 aaKnown RBP16.95■□□□□ 0.3
TIMP3-201ENST00000266085 EBAG9O00559 213 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 NBPF11Q86T75 865 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 KIAA1524Q8TCG1 905 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 STK17AQ9UEE5 414 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 USTQ9Y2C2 406 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 MEIS1O00470 390 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 PRPF6O94906 941 aaKnown RBP16.95■□□□□ 0.3
TIMP3-201ENST00000266085 IGBP1P78318 339 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 NKX1-1Q15270 411 aaPredicted RBP16.95■□□□□ 0.3
TIMP3-201ENST00000266085 LRRC41Q15345 812 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 C6orf163Q5TEZ5 329 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 KLHL7Q8IXQ5 586 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 FBF1Q8TES7 1133 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 DHTKD1Q96HY7 919 aaPredicted RBP16.95■□□□□ 0.3
TIMP3-201ENST00000266085 KCNK9Q9NPC2 374 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 MYO1AQ9UBC5 1043 aa16.95■□□□□ 0.3
TIMP3-201ENST00000266085 MYL1P05976 194 aa16.94■□□□□ 0.3
TIMP3-201ENST00000266085 CCDC14Q49A88 953 aa16.94■□□□□ 0.3
TIMP3-201ENST00000266085 RPGRIP1Q96KN7 1286 aa16.94■□□□□ 0.3
TIMP3-201ENST00000266085 FAM204AQ9H8W3 233 aa16.94■□□□□ 0.3
TIMP3-201ENST00000266085 ASIC3Q9UHC3 531 aa16.94■□□□□ 0.3
TIMP3-201ENST00000266085 PPP2R2CQ9Y2T4 447 aa16.94■□□□□ 0.3
TIMP3-201ENST00000266085 ZC3H13Q5T200 1668 aaKnown RBP16.94■□□□□ 0.3
TIMP3-201ENST00000266085 POLR2FP61218 127 aaKnown RBP16.94■□□□□ 0.3
TIMP3-201ENST00000266085 ZBTB16Q05516 673 aa16.94■□□□□ 0.3
TIMP3-201ENST00000266085 ARMC9Q7Z3E5 817 aa16.94■□□□□ 0.3
TIMP3-201ENST00000266085 CNOT6LQ96LI5 555 aaKnown RBP16.94■□□□□ 0.3
TIMP3-201ENST00000266085 LY9Q9HBG7 655 aa16.94■□□□□ 0.3
TIMP3-201ENST00000266085 CHGBP05060 677 aa16.94■□□□□ 0.3
TIMP3-201ENST00000266085 EIF2AK2P19525 551 aaKnown RBP16.94■□□□□ 0.3
TIMP3-201ENST00000266085 ABCB4P21439 1286 aa16.94■□□□□ 0.3
TIMP3-201ENST00000266085 SEPT14Q6ZU15 432 aa16.94■□□□□ 0.3
TIMP3-201ENST00000266085 ZNF526Q8TF50 670 aaPredicted RBP16.94■□□□□ 0.3
TIMP3-201ENST00000266085 ANO3Q9BYT9 981 aa16.94■□□□□ 0.3
TIMP3-201ENST00000266085 EEF1GP26641 437 aaKnown RBP16.93■□□□□ 0.3
TIMP3-201ENST00000266085 YWHAEP62258 255 aaKnown RBP16.93■□□□□ 0.3
TIMP3-201ENST00000266085 CEP128Q6ZU80 1094 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 TBC1D16Q8TBP0 767 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 P4HA1P13674 534 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 CLUL1Q15846 466 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 EEPD1Q7L9B9 569 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 SLC7A3Q8WY07 619 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 ADPGKQ9BRR6 497 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 MTA3Q9BTC8 594 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 C1orf112Q9NSG2 853 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 IREB2P48200 963 aaKnown RBP16.93■□□□□ 0.3
TIMP3-201ENST00000266085 FKBP3Q00688 224 aaKnown RBP16.93■□□□□ 0.3
TIMP3-201ENST00000266085 C11orf57Q6ZUT1 292 aaPredicted RBP16.93■□□□□ 0.3
TIMP3-201ENST00000266085 RNF169Q8NCN4 708 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 RNF34Q969K3 372 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 SEPT9Q9UHD8 586 aaPredicted RBP16.93■□□□□ 0.3
TIMP3-201ENST00000266085 EPN1Q9Y6I3 576 aaPredicted RBP16.93■□□□□ 0.3
TIMP3-201ENST00000266085 HNRNPDLO14979 420 aaKnown RBP16.93■□□□□ 0.3
TIMP3-201ENST00000266085 ZNF500O60304 480 aaPredicted RBP16.93■□□□□ 0.3
TIMP3-201ENST00000266085 NR2F2P24468 414 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 TMOD1P28289 359 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 PPM1KQ8N3J5 372 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 POMGNT1Q8WZA1 660 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 NSUN4Q96CB9 384 aaKnown RBP16.93■□□□□ 0.3
TIMP3-201ENST00000266085 NACC1Q96RE7 527 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 AMFRQ9UKV5 643 aa16.93■□□□□ 0.3
TIMP3-201ENST00000266085 CEP170BQ9Y4F5 1589 aaPredicted RBP16.92■□□□□ 0.3
TIMP3-201ENST00000266085 FAM160B1Q5W0V3 765 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 ARL6IP4Q66PJ3 421 aaKnown RBP16.92■□□□□ 0.3
TIMP3-201ENST00000266085 HACE1Q8IYU2 909 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 P2RX5Q93086 422 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 ZFP91Q96JP5 570 aaPredicted RBP16.92■□□□□ 0.3
TIMP3-201ENST00000266085 PREX1Q8TCU6 1659 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 NTSR2O95665 410 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 ARL1P40616 181 aaPredicted RBP16.92■□□□□ 0.3
TIMP3-201ENST00000266085 CDHR1Q96JP9 859 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 CRAMP1Q96RY5 1269 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 WDR19Q8NEZ3 1342 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 E7EVH7 732 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 PLCG1P19174 1290 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 CDC27P30260 824 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 PAK2Q13177 524 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 EXOC3L4Q17RC7 722 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 ST7Q9NRC1 585 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 PNPLA7Q6ZV29 1317 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 H2AFZP0C0S5 128 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 OSBPP22059 807 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 PPM1FP49593 454 aaPredicted RBP16.92■□□□□ 0.3
TIMP3-201ENST00000266085 H2AFVQ71UI9 128 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 CCDC105Q8IYK2 499 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 RIC8AQ9NPQ8 531 aa16.92■□□□□ 0.3
TIMP3-201ENST00000266085 PFKFB3Q16875 520 aaPredicted RBP16.91■□□□□ 0.3
TIMP3-201ENST00000266085 NKIRAS1Q9NYS0 192 aa16.91■□□□□ 0.3
TIMP3-201ENST00000266085 ZHX1Q9UKY1 873 aaPredicted RBP16.91■□□□□ 0.3
TIMP3-201ENST00000266085 ZBTB5O15062 677 aa16.91■□□□□ 0.3
TIMP3-201ENST00000266085 ZNF658Q5TYW1 1059 aaPredicted RBP16.91■□□□□ 0.3
TIMP3-201ENST00000266085 STOX1Q6ZVD7 989 aa16.91■□□□□ 0.3
TIMP3-201ENST00000266085 CEP170P1Q96L14 293 aa16.91■□□□□ 0.3
TIMP3-201ENST00000266085 ANKFY1Q9P2R3 1169 aa16.91■□□□□ 0.3
TIMP3-201ENST00000266085 FEZ2Q9UHY8 353 aaPredicted RBP16.91■□□□□ 0.3
TIMP3-201ENST00000266085 DAPK3O43293 454 aa16.91■□□□□ 0.3
TIMP3-201ENST00000266085 CASP14P31944 242 aa16.91■□□□□ 0.3
TIMP3-201ENST00000266085 FAM83BQ5T0W9 1011 aa16.91■□□□□ 0.3
TIMP3-201ENST00000266085 MAN1B1Q9UKM7 699 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms