RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 FAM178BQ8IXR5 827 aa16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 FMR1NBQ8N0W7 255 aaPredicted RBP16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 ZNF579Q8NAF0 562 aaKnown RBP16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 CCDC42Q96M95 316 aa16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 MAN1B1Q9UKM7 699 aa16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 COL4A3BPQ9Y5P4 624 aa16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 GAKO14976 1311 aa16.08■□□□□ 0.16
PDLIM2-201ENST00000265810 UTP14CQ5TAP6 766 aaKnown RBP16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 CNGA4Q8IV77 575 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 EHD4Q9H223 541 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 GOLGA6L9A6NEM1 432 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 STXBP3O00186 592 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 CASP1P29466 404 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 CCND2P30279 289 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 CAP2P40123 477 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 EVCP57679 992 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 MORC3Q14149 939 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 SHC4Q6S5L8 630 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 LARSQ9P2J5 1176 aaKnown RBP16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 STK17AQ9UEE5 414 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 EXOC7Q9UPT5 735 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 PCDHB13Q9Y5F0 798 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 ABCB11O95342 1321 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 PALM3A6NDB9 673 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 PP2D1A8MPX8 630 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 CCDC172P0C7W6 258 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 SHMT1P34896 483 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 ST3GAL1Q11201 340 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 GPS2Q13227 327 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 RAPGEF1Q13905 1077 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 HS1BP3Q53T59 392 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 SLC51AQ86UW1 340 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 LPAR1Q92633 364 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 ZKSCAN4Q969J2 545 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 ABT1Q9ULW3 272 aaKnown RBP16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 NBPF3Q9H094 633 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 VPS33BQ9H267 617 aa16.07■□□□□ 0.16
PDLIM2-201ENST00000265810 WDR46O15213 610 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 CTNND1O60716 968 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 DDIT3P35638 169 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 NTRK3Q16288 839 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 IMPG2Q9BZV3 1241 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 NHSL1Q5SYE7 1610 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 SPATA1Q5VX52 437 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 BAG1Q99933 345 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 IDI2Q9BXS1 227 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 TRPC6Q9Y210 931 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 UQCRHLA0A096LP55 91 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 UQCRHP07919 91 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 MAP3K9P80192 1104 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 EVX2Q03828 476 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 LRRC41Q15345 812 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 SPDYE2Q495Y8 402 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 NBPF12Q5TAG4 269 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 FNBP1Q96RU3 617 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 SUGCTQ9HAC7 445 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 STAT3P40763 770 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 FKBP1AP62942 108 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 ATP2C1P98194 919 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 CTTNQ14247 550 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 CDHR1Q96JP9 859 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 PNMA3Q9UL41 463 aa16.06■□□□□ 0.16
PDLIM2-201ENST00000265810 COG2Q14746 738 aa16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 NBPF11Q86T75 865 aa16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 FBXL16Q8N461 479 aa16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 FBXO28Q9NVF7 368 aa16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 KCNJ18B7U540 433 aa16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 VIL1P09327 827 aaKnown RBP16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 BIRC3Q13489 604 aa16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 KCNJ12Q14500 433 aa16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 ODR4Q5SWX8 454 aa16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 METTL13Q8N6R0 699 aa16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 NACC1Q96RE7 527 aa16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 CCDC175P0C221 793 aa16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 PLA2G4BP0C869 781 aa16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 DNM2P50570 870 aa16.05■□□□□ 0.16
PDLIM2-201ENST00000265810 FSD2A1L4K1 749 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 GPIHBP1Q8IV16 184 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 UBXN4Q92575 508 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 ATP6V0A1Q93050 837 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 COL16A1Q07092 1604 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 BAZ2BQ9UIF8 2168 aaKnown RBP16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 K7ENM7 598 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 SMARCA1P28370 1054 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 INPP5BP32019 993 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 CYP2J2P51589 502 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 MTMR1Q13613 665 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 RASGRP2Q7LDG7 609 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 FAM83AQ86UY5 434 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 ZMYND12Q9H0C1 365 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 BHMT2Q9H2M3 363 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 SLURP2P0DP57 97 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 KRT9P35527 623 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 DEPTORQ8TB45 409 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 DNAI1Q9UI46 699 aa16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 FBXO2Q9UK22 296 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-201ENST00000265810 C19orf81C9J6K1 198 aa16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 FDX1P10109 184 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms