RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 BIRC3Q13489 604 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 PPP1R14BQ96C90 147 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 EPN3Q9H201 632 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 MRPL44Q9H9J2 332 aaKnown RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 DNM3Q9UQ16 869 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 MAPK8IP1Q9UQF2 711 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 PREX2Q70Z35 1606 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 TRPM1Q7Z4N2 1603 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 CTNND1O60716 968 aaKnown RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 PFKFB2O60825 505 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 CCNHP51946 323 aaPredicted RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 PDE1BQ01064 536 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 PPARDQ03181 441 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 SF3A3Q12874 501 aaKnown RBP eCLIP6.2□□□□□ -1.42
VCAN-201ENST00000265077 MTA1Q13330 715 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 UAP1Q16222 522 aaPredicted RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 TMEM87AQ8NBN3 555 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 NR1H4Q96RI1 486 aaPredicted RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 VIPAS39Q9H9C1 493 aa6.2□□□□□ -1.42
VCAN-201ENST00000265077 TYW1Q9NV66 732 aaKnown RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 V9GY48 417 aaPredicted RBP6.2□□□□□ -1.42
VCAN-201ENST00000265077 ATP5HO75947 161 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 OGFOD1Q8N543 542 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 CLMNQ96JQ2 1002 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 VCPKMTQ9H867 229 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 SH3TC1Q8TE82 1336 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 PDE8AO60658 829 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 ADCY7P51828 1080 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 EXOC8Q8IYI6 725 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 KIAA2013Q8IYS2 634 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 C3orf20Q8ND61 904 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 GPR101Q96P66 508 aaPredicted RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 C10orf88Q9H8K7 445 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 PDE5AO76074 875 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 MLH1P40692 756 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 YWHAEP62258 255 aaKnown RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 HERC4Q5GLZ8 1057 aaPredicted RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 LSM14BQ9BX40 385 aaKnown RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 METTL14Q9HCE5 456 aaKnown RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 CHMP2BQ9UQN3 213 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 CCDC88CQ9P219 2028 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 ITSN1Q15811 1721 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 IMPDH2P12268 514 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 EEF1GP26641 437 aaKnown RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 RAD23BP54727 409 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 MRPS9P82933 396 aaKnown RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 SLFN12Q8IYM2 578 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 CFAP61Q8NHU2 1237 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 KCNF1Q9H3M0 494 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 LAD1O00515 517 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 CPP00450 1065 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 STX2P32856 288 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 GEN1Q17RS7 908 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 TTC1Q99614 292 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 USP19O94966 1318 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 ARPC4P59998 168 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 TIMM10P62072 90 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 SLC39A6Q13433 755 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
VCAN-201ENST00000265077 PHKBQ93100 1093 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 HAUS7Q99871 368 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 NOD2Q9HC29 1040 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 BCORL1Q5H9F3 1711 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 KDRP35968 1356 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 ASXL2Q76L83 1435 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 GTPBP6O43824 516 aaPredicted RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 KRT15P19012 456 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 GSCP56915 257 aaPredicted RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 FNBP4Q8N3X1 1017 aaPredicted RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 XAGE2Q96GT9 111 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 FANCLQ9NW38 375 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 RNMTO43148 476 aaKnown RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 KCNA3P22001 575 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 STAT1P42224 750 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 AKNAD1Q5T1N1 836 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 SPATA17Q96L03 361 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 NUDCD1Q96RS6 583 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 EYA1Q99502 592 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 CARD9Q9H257 536 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 ADCY9O60503 1353 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 NUP214P35658 2090 aaPredicted RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 ADCY10Q96PN6 1610 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 ZNF608Q9ULD9 1512 aaPredicted RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 EIF4E1BA6NMX2 242 aaKnown RBP6.19□□□□□ -1.42
VCAN-201ENST00000265077 HSPA6P17066 643 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 IQCB1Q15051 598 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 TPTE2Q6XPS3 522 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 USP28Q96RU2 1077 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 DLGAP2Q9P1A6 1054 aa6.19□□□□□ -1.42
VCAN-201ENST00000265077 GMNCA6NCL1 334 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 NONOQ15233 471 aaKnown RBP eCLIP6.18□□□□□ -1.42
VCAN-201ENST00000265077 ZKSCAN4Q969J2 545 aaPredicted RBP6.18□□□□□ -1.42
VCAN-201ENST00000265077 PNMA6EA0A0J9YXQ4 647 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 TARSL2A2RTX5 802 aaKnown RBP6.18□□□□□ -1.42
VCAN-201ENST00000265077 RCN1Q15293 331 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 LRRC31Q6UY01 552 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 DZIP3Q86Y13 1208 aaKnown RBP6.18□□□□□ -1.42
VCAN-201ENST00000265077 MIGA1Q8NAN2 632 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 GSDMAQ96QA5 445 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms