RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 CCDC80Q76M96 950 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 TRMT44Q8IYL2 757 aaKnown RBP9.2□□□□□ -0.94
LDB3-201ENST00000263066 PLEKHG4BQ96PX9 1271 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 EYA3Q99504 573 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.2□□□□□ -0.94
LDB3-201ENST00000263066 YEATS4O95619 227 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 KRT14P02533 472 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 NLRP12P59046 1061 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 APBA1Q02410 837 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 TMEM132AQ24JP5 1023 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 SLC27A3Q5K4L6 730 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 OLFML2BQ68BL8 750 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 MIS18BP1Q6P0N0 1132 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 CCDC65Q8IXS2 484 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 LPIN2Q92539 896 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 CNKSR1Q969H4 720 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 EVI5LQ96CN4 794 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 VIPAS39Q9H9C1 493 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 PIM2Q9P1W9 311 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 INTUQ9ULD6 942 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 GCOM1H8Y6P7 765 aaPredicted RBP9.2□□□□□ -0.94
LDB3-201ENST00000263066 IFIT3O14879 490 aaKnown RBP9.2□□□□□ -0.94
LDB3-201ENST00000263066 ATP6V1G2O95670 118 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 SYF2O95926 243 aaKnown RBP9.2□□□□□ -0.94
LDB3-201ENST00000263066 MYZAPP0CAP1 466 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 KLRK1P26718 216 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 GRAMD4Q6IC98 578 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 C8orf74Q6P047 294 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 MSL3Q8N5Y2 521 aaKnown RBP9.2□□□□□ -0.94
LDB3-201ENST00000263066 GBP7Q8N8V2 638 aaPredicted RBP9.2□□□□□ -0.94
LDB3-201ENST00000263066 DNAAF2Q9NVR5 837 aaKnown RBP9.2□□□□□ -0.94
LDB3-201ENST00000263066 hCG_1642624A0A1W2PR95 340 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 BAG3O95817 575 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 FAM200BP0CF97 657 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 INHBEP58166 350 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 RNASE9P60153 205 aaKnown RBP9.19□□□□□ -0.94
LDB3-201ENST00000263066 C2orf54Q08AI8 447 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 MIGA2Q7L4E1 593 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 NCAPG2Q86XI2 1143 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 CCDC197Q8NCU1 140 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 DPF2Q92785 391 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 HAUS1Q96CS2 278 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 ANKRD2Q9GZV1 360 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 TSPYL2Q9H2G4 693 aaPredicted RBP9.19□□□□□ -0.94
LDB3-201ENST00000263066 NFE2L3Q9Y4A8 694 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 CYP2D7A0A087X1C5 515 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 SPDYE3A6NKU9 549 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 PRDX5P30044 214 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 VPS41P49754 854 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 DYNLL1P63167 89 aaKnown RBP9.19□□□□□ -0.94
LDB3-201ENST00000263066 SEPT6Q14141 434 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 WLSQ5T9L3 541 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 WDR75Q8IWA0 830 aaKnown RBP9.19□□□□□ -0.94
LDB3-201ENST00000263066 ARHGAP18Q8N392 663 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 SPATA5Q8NB90 893 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 UBLCP1Q8WVY7 318 aaPredicted RBP9.19□□□□□ -0.94
LDB3-201ENST00000263066 SPATA17Q96L03 361 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 MRPL44Q9H9J2 332 aaKnown RBP9.19□□□□□ -0.94
LDB3-201ENST00000263066 TMOD4Q9NZQ9 345 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 ZNF532Q9HCE3 1301 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.19□□□□□ -0.94
LDB3-201ENST00000263066 MAGEB6P1A0A0J9YX57 407 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 FLOT1O75955 427 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 ATP2A2P16615 1042 aaKnown RBP9.19□□□□□ -0.94
LDB3-201ENST00000263066 SCTRP47872 440 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 COG7P83436 770 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 SFSWAPQ12872 951 aaKnown RBP9.19□□□□□ -0.94
LDB3-201ENST00000263066 SLC44A4Q53GD3 710 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 GALNT17Q6IS24 598 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 PHC3Q8NDX5 983 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 ARL8AQ96BM9 186 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 OPTNQ96CV9 577 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 RNPC3Q96LT9 517 aaKnown RBP9.19□□□□□ -0.94
LDB3-201ENST00000263066 MYL10Q9BUA6 226 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 GGT7Q9UJ14 662 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 CORO1CQ9ULV4 474 aaPredicted RBP9.19□□□□□ -0.94
LDB3-201ENST00000263066 CD2APQ9Y5K6 639 aa9.19□□□□□ -0.94
LDB3-201ENST00000263066 RTN2O75298 545 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 UQCRFS1P1P0C7P4 283 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 SERPINB4P48594 390 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 CTDSPL2Q05D32 466 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 PLCB4Q15147 1175 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 SLC5A9Q2M3M2 681 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 MYCBPAPQ8TBZ2 947 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 SSH3Q8TE77 659 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 HDAC9Q9UKV0 1011 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 MINPP1Q9UNW1 487 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 GMNCA6NCL1 334 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 TMEM110-MUSTN1A8MSY1 372 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 H7C1W4 665 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 TRIM21P19474 475 aaKnown RBP9.18□□□□□ -0.94
LDB3-201ENST00000263066 DRP2Q13474 957 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 VSTM4Q8IW00 320 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 PPFIBP2Q8ND30 876 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 OR8K1Q8NGG5 319 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 JAKMIP2Q96AA8 810 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 CYFIP2Q96F07 1278 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 FAM81BQ96LP2 452 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 RBM8AQ9Y5S9 174 aaKnown RBP9.18□□□□□ -0.94
LDB3-201ENST00000263066 ANKRD33BA6NCL7 494 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms