RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 TBC1D5Q92609 795 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 KIFC2Q96AC6 838 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 PNMA5Q96PV4 448 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 ANO3Q9BYT9 981 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 FBXO28Q9NVF7 368 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 IMPACTQ9P2X3 320 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 PRR12Q9ULL5 1215 aa15.25■□□□□ 0.03
VMP1-201ENST00000262291 CTIFO43310 598 aaKnown RBP15.24■□□□□ 0.03
VMP1-201ENST00000262291 ZNF658Q5TYW1 1059 aaPredicted RBP15.24■□□□□ 0.03
VMP1-201ENST00000262291 IGSF22Q8N9C0 903 aa15.24■□□□□ 0.03
VMP1-201ENST00000262291 SNX29Q8TEQ0 813 aa15.24■□□□□ 0.03
VMP1-201ENST00000262291 KBTBD4Q9NVX7 518 aa15.24■□□□□ 0.03
VMP1-201ENST00000262291 FZD1Q9UP38 647 aa15.24■□□□□ 0.03
VMP1-201ENST00000262291 MEIS2O14770 477 aa15.24■□□□□ 0.03
VMP1-201ENST00000262291 POLD1P28340 1107 aa15.24■□□□□ 0.03
VMP1-201ENST00000262291 PAK1Q13153 545 aa15.24■□□□□ 0.03
VMP1-201ENST00000262291 PYM1Q9BRP8 204 aaKnown RBP15.24■□□□□ 0.03
VMP1-201ENST00000262291 VPS16Q9H269 839 aa15.24■□□□□ 0.03
VMP1-201ENST00000262291 MYOZ2Q9NPC6 264 aa15.24■□□□□ 0.03
VMP1-201ENST00000262291 TAB2Q9NYJ8 693 aa15.24■□□□□ 0.03
VMP1-201ENST00000262291 TNNT1P13805 278 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 UBXN2AP68543 259 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 TBC1D10BQ4KMP7 808 aaPredicted RBP15.23■□□□□ 0.03
VMP1-201ENST00000262291 PRAMEF18Q5VWM3 479 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 PPP1R18Q6NYC8 613 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 GMCL1P1Q8NEA9 526 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 CALML4Q96GE6 196 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 CDK5RAP3Q96JB5 506 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 AMNQ9BXJ7 453 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 HERC5Q9UII4 1024 aaKnown RBP15.23■□□□□ 0.03
VMP1-201ENST00000262291 SSBP05455 408 aaKnown RBP eCLIP15.23■□□□□ 0.03
VMP1-201ENST00000262291 TMEM266Q2M3C6 531 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 APTXQ7Z2E3 356 aaKnown RBP15.23■□□□□ 0.03
VMP1-201ENST00000262291 FAM177A1Q8N128 213 aaPredicted RBP15.23■□□□□ 0.03
VMP1-201ENST00000262291 CYP2W1Q8TAV3 490 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 FBXO41Q8TF61 875 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 GMCL1Q96IK5 515 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 PRELPP51888 382 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 PDE4DQ08499 809 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 STK4Q13043 487 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 RASA3Q14644 834 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 PRR16Q569H4 304 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 CEP135Q66GS9 1140 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 CCDC150Q8NCX0 1101 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 AK8Q96MA6 479 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 TRIM9Q9C026 710 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 ARHGEF10LQ9HCE6 1279 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 BLOC1S4Q9NUP1 217 aa15.23■□□□□ 0.03
VMP1-201ENST00000262291 OPLAHO14841 1288 aa15.22■□□□□ 0.03
VMP1-201ENST00000262291 MYO1BO43795 1136 aa15.22■□□□□ 0.03
VMP1-201ENST00000262291 RAD51AP2Q09MP3 1159 aa15.22■□□□□ 0.03
VMP1-201ENST00000262291 E4F1Q66K89 784 aaPredicted RBP15.22■□□□□ 0.03
VMP1-201ENST00000262291 SLC39A2Q9NP94 309 aa15.22■□□□□ 0.03
VMP1-201ENST00000262291 ST7Q9NRC1 585 aa15.22■□□□□ 0.03
VMP1-201ENST00000262291 RMND1Q9NWS8 449 aa15.22■□□□□ 0.03
VMP1-201ENST00000262291 MYMKA6NI61 221 aa15.22■□□□□ 0.03
VMP1-201ENST00000262291 PES1O00541 588 aaKnown RBP15.22■□□□□ 0.03
VMP1-201ENST00000262291 NR1I3Q14994 352 aa15.22■□□□□ 0.03
VMP1-201ENST00000262291 CDKAL1Q5VV42 579 aa15.22■□□□□ 0.03
VMP1-201ENST00000262291 CCAR2Q8N163 923 aaKnown RBP15.22■□□□□ 0.03
VMP1-201ENST00000262291 AGBL3Q8NEM8 1001 aa15.22■□□□□ 0.03
VMP1-201ENST00000262291 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.22■□□□□ 0.03
VMP1-201ENST00000262291 V9GYY5 206 aaPredicted RBP15.22■□□□□ 0.03
VMP1-201ENST00000262291 IDEP14735 1019 aa15.21■□□□□ 0.03
VMP1-201ENST00000262291 TGFB2P61812 414 aa15.21■□□□□ 0.03
VMP1-201ENST00000262291 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
VMP1-201ENST00000262291 GABPB1Q06547 395 aaPredicted RBP15.21■□□□□ 0.03
VMP1-201ENST00000262291 KRT31Q15323 416 aa15.21■□□□□ 0.03
VMP1-201ENST00000262291 ZBTB9Q96C00 473 aa15.21■□□□□ 0.03
VMP1-201ENST00000262291 PSME4Q14997 1843 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 CFBP00751 764 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 ERCC3P19447 782 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 FXR2P51116 673 aaKnown RBP eCLIP15.21■□□□□ 0.02
VMP1-201ENST00000262291 STAT2P52630 851 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 ARHGAP4P98171 946 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 TERF2Q15554 542 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 GRIPAP1Q4V328 841 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 SPECC1LQ69YQ0 1117 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 ADSSL1Q8N142 457 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 GLIS3Q8NEA6 775 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 NLGN2Q8NFZ4 835 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 EXOC1Q9NV70 894 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 RWDD2AQ9UIY3 292 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 DDX41Q9UJV9 622 aaKnown RBP15.21■□□□□ 0.02
VMP1-201ENST00000262291 PCDHA12Q9UN75 941 aa15.21■□□□□ 0.02
VMP1-201ENST00000262291 A0A1B0GTH6 734 aa15.2■□□□□ 0.02
VMP1-201ENST00000262291 GMPSP49915 693 aaPredicted RBP15.2■□□□□ 0.02
VMP1-201ENST00000262291 KRT79Q5XKE5 535 aa15.2■□□□□ 0.02
VMP1-201ENST00000262291 MTFR1LQ9H019 292 aa15.2■□□□□ 0.02
VMP1-201ENST00000262291 TMX2Q9Y320 296 aa15.2■□□□□ 0.02
VMP1-201ENST00000262291 KCNJ18B7U540 433 aa15.2■□□□□ 0.02
VMP1-201ENST00000262291 CAPN2P17655 700 aa15.2■□□□□ 0.02
VMP1-201ENST00000262291 CAP2P40123 477 aa15.2■□□□□ 0.02
VMP1-201ENST00000262291 KCNJ12Q14500 433 aa15.2■□□□□ 0.02
VMP1-201ENST00000262291 PPP4R3AQ6IN85 833 aa15.2■□□□□ 0.02
VMP1-201ENST00000262291 SV2BQ7L1I2 683 aa15.2■□□□□ 0.02
VMP1-201ENST00000262291 MICALL2Q8IY33 904 aa15.2■□□□□ 0.02
VMP1-201ENST00000262291 TRIM47Q96LD4 638 aa15.2■□□□□ 0.02
VMP1-201ENST00000262291 ZNF341Q9BYN7 854 aa15.2■□□□□ 0.02
VMP1-201ENST00000262291 POLD4Q9HCU8 107 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms