RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 BICDL2A1A5D9 508 aa18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 ZRANB2O95218 330 aaKnown RBP eCLIP18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 HLA-DOAP06340 250 aa18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 ERCC3P19447 782 aa18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 CLK2P49760 499 aaKnown RBP18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 TBC1D8BQ0IIM8 1120 aa18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 ORC2Q13416 577 aaPredicted RBP18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 CNNM4Q6P4Q7 775 aa18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 TMCO3Q6UWJ1 677 aa18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 NOC3LQ8WTT2 800 aaKnown RBP18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 ARGLU1Q9NWB6 273 aaPredicted RBP18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 ZNF219Q9P2Y4 722 aaPredicted RBP18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 GREB1LQ9C091 1923 aaPredicted RBP18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 CTAGE9A4FU28 777 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 MMP10P09238 476 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 IDEP14735 1019 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 HHIPL2Q6UWX4 724 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 GOLGA1Q92805 767 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 HAS1Q92839 578 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 ZNF622Q969S3 477 aaKnown RBP eCLIP18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 NOC4LQ9BVI4 516 aaKnown RBP18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 TTYH3Q9C0H2 523 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 DDX25Q9UHL0 483 aaKnown RBP18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 GUCA1BQ9UMX6 200 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 SIPA1L1O43166 1804 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 DDTLA6NHG4 134 aaPredicted RBP18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 USP17L15C9J2P7 530 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 USP17L13C9JLJ4 530 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 USP17L11C9JVI0 530 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 USP17L18D6R9N7 530 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 USP17L22D6RA61 530 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 USP17L17D6RBQ6 530 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 USP17L19D6RCP7 530 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 USP17L20D6RJB6 530 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 ZBTB5O15062 677 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 TRIM21P19474 475 aaKnown RBP18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 CHMP4BP1P59074 171 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 USP17L24Q0WX57 530 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 SEMA3FQ13275 785 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 BMS1Q14692 1282 aaKnown RBP18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 USP17L6PQ6QN14 398 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 GPR161Q8N6U8 529 aaKnown RBP18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 RAD54LQ92698 747 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 CUL5Q93034 780 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 PCMTD1Q96MG8 357 aaPredicted RBP18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 PARD6BQ9BYG5 372 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 CDC23Q9UJX2 597 aa18.47■□□□□ 0.55
UBQLN1-201ENST00000257468 HERVK_113P62684 666 aa18.46■□□□□ 0.55
UBQLN1-201ENST00000257468 LRRC41Q15345 812 aa18.46■□□□□ 0.55
UBQLN1-201ENST00000257468 UNC13DQ70J99 1090 aa18.46■□□□□ 0.55
UBQLN1-201ENST00000257468 NLGN1Q8N2Q7 840 aa18.46■□□□□ 0.55
UBQLN1-201ENST00000257468 STK17AQ9UEE5 414 aa18.46■□□□□ 0.55
UBQLN1-201ENST00000257468 ARFGEF1Q9Y6D6 1849 aa18.46■□□□□ 0.55
UBQLN1-201ENST00000257468 KRT79Q5XKE5 535 aa18.46■□□□□ 0.54
UBQLN1-201ENST00000257468 SRGAP1Q7Z6B7 1085 aa18.46■□□□□ 0.54
UBQLN1-201ENST00000257468 DDX12PQ92771 950 aa18.46■□□□□ 0.54
UBQLN1-201ENST00000257468 PSTPIP2Q9H939 334 aa18.46■□□□□ 0.54
UBQLN1-201ENST00000257468 MYO3BQ8WXR4 1341 aa18.45■□□□□ 0.54
UBQLN1-201ENST00000257468 EEF2P13639 858 aaKnown RBP18.45■□□□□ 0.54
UBQLN1-201ENST00000257468 ALDH1B1P30837 517 aa18.45■□□□□ 0.54
UBQLN1-201ENST00000257468 RBM5P52756 815 aaKnown RBP eCLIP18.45■□□□□ 0.54
UBQLN1-201ENST00000257468 SNAP25P60880 206 aa18.45■□□□□ 0.54
UBQLN1-201ENST00000257468 GPATCH4Q5T3I0 446 aaKnown RBP18.45■□□□□ 0.54
UBQLN1-201ENST00000257468 ZNF772Q68DY9 489 aaPredicted RBP18.45■□□□□ 0.54
UBQLN1-201ENST00000257468 CENPPQ6IPU0 288 aa18.45■□□□□ 0.54
UBQLN1-201ENST00000257468 PPP1R18Q6NYC8 613 aa18.45■□□□□ 0.54
UBQLN1-201ENST00000257468 GPIHBP1Q8IV16 184 aa18.45■□□□□ 0.54
UBQLN1-201ENST00000257468 RABGGTAQ92696 567 aa18.45■□□□□ 0.54
UBQLN1-201ENST00000257468 NAPGQ99747 312 aaPredicted RBP18.45■□□□□ 0.54
UBQLN1-201ENST00000257468 PRDM4Q9UKN5 801 aa18.45■□□□□ 0.54
UBQLN1-201ENST00000257468 PLA2G4AP47712 749 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 PDIA5Q14554 519 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 QRICH1Q2TAL8 776 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 TMEM119Q4V9L6 283 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 PPP4R3AQ6IN85 833 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 SCN9AQ15858 1988 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 SASH3O75995 380 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 CC2D1AQ6P1N0 951 aaPredicted RBP18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 SH3BP5LQ7L8J4 393 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 FAM114A1Q8IWE2 563 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 AKT1S1Q96B36 256 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 MTMR8Q96EF0 704 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 MASTLQ96GX5 879 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 RAB34Q9BZG1 259 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 FAM198AQ9UFP1 575 aa18.44■□□□□ 0.54
UBQLN1-201ENST00000257468 EPHB6O15197 1021 aa18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 MARCH6O60337 910 aa18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 TAL1P17542 331 aaPredicted RBP18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 PDE6BP35913 854 aa18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 MRPL12P52815 198 aaKnown RBP18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 MEA1Q16626 185 aa18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 TSR1Q2NL82 804 aaKnown RBP18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 ZSCAN29Q8IWY8 852 aaPredicted RBP18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 RCCD1A6NED2 376 aa18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 ENC1O14682 589 aa18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 COBLL1Q53SF7 1204 aa18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 ZDHHC15Q96MV8 337 aa18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 GTPBP4Q9BZE4 634 aaKnown RBP18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 ZHX1Q9UKY1 873 aaPredicted RBP18.43■□□□□ 0.54
UBQLN1-201ENST00000257468 ATF5Q9Y2D1 282 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms