RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.57□□□□□ -0.4
PDE6B-201ENST00000255622 RASA1P20936 1047 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 MYBPC2Q14324 1141 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 USP17L2Q6R6M4 530 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 SRGAP1Q7Z6B7 1085 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 ZNF444Q8N0Y2 327 aaPredicted RBP12.57□□□□□ -0.4
PDE6B-201ENST00000255622 KCNV2Q8TDN2 545 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 MICAL1Q8TDZ2 1067 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 VAT1LQ9HCJ6 419 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 ADAM21Q9UKJ8 722 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 REXO2Q9Y3B8 237 aaKnown RBP12.57□□□□□ -0.4
PDE6B-201ENST00000255622 COL24A1Q17RW2 1714 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 SNUPNO95149 360 aaKnown RBP12.56□□□□□ -0.4
PDE6B-201ENST00000255622 FECHP22830 423 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 KLK7P49862 253 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 LETM2Q2VYF4 491 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 HPS3Q969F9 1004 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 C8orf37Q96NL8 207 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 PNKPQ96T60 521 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 ANKZF1Q9H8Y5 726 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 SH3GLB2Q9NR46 395 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 CTAGE9A4FU28 777 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 KLRF2D3W0D1 207 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 CCNT1O60563 726 aaKnown RBP12.56□□□□□ -0.4
PDE6B-201ENST00000255622 GCFC2P16383 781 aaKnown RBP12.56□□□□□ -0.4
PDE6B-201ENST00000255622 TXNRD1Q16881 649 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 CYP26C1Q6V0L0 522 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 TMTC1Q8IUR5 882 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 CCDC51Q96ER9 411 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 TRIM47Q96LD4 638 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 CDC23Q9UJX2 597 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 CCNL1Q9UK58 526 aaPredicted RBP12.56□□□□□ -0.4
PDE6B-201ENST00000255622 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDE6B-201ENST00000255622 B4DLN1 442 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 PLCG1P19174 1290 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 CLNS1AP54105 237 aaKnown RBP12.56□□□□□ -0.4
PDE6B-201ENST00000255622 PYM1Q9BRP8 204 aaKnown RBP12.56□□□□□ -0.4
PDE6B-201ENST00000255622 ARFGAP3Q9NP61 516 aa12.56□□□□□ -0.4
PDE6B-201ENST00000255622 RTCBQ9Y3I0 505 aaKnown RBP12.56□□□□□ -0.4
PDE6B-201ENST00000255622 PALM3A6NDB9 673 aaPredicted RBP12.55□□□□□ -0.4
PDE6B-201ENST00000255622 RHOXF2BP0C7M4 288 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 SPAG1Q07617 926 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 NAA25Q14CX7 972 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 MEX3CQ5U5Q3 659 aaKnown RBP12.55□□□□□ -0.4
PDE6B-201ENST00000255622 MB21D1Q8N884 522 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 RHOXF2Q9BQY4 288 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 FUT8Q9BYC5 575 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 SUGCTQ9HAC7 445 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 ODF2LQ9ULJ1 636 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 GUCA1BQ9UMX6 200 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 TTF2Q9UNY4 1162 aaKnown RBP12.55□□□□□ -0.4
PDE6B-201ENST00000255622 FLT1P17948 1338 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 NAV1Q8NEY1 1877 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 ENC1O14682 589 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 NAPAP54920 295 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 SMC1AQ14683 1233 aaKnown RBP12.55□□□□□ -0.4
PDE6B-201ENST00000255622 NCAPH2Q6IBW4 605 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 EFCAB13Q8IY85 973 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 WDR66Q8TBY9 1149 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 ANKS1AQ92625 1134 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 RTFDC1Q9BY42 306 aaPredicted RBP12.55□□□□□ -0.4
PDE6B-201ENST00000255622 KBTBD4Q9NVX7 518 aa12.55□□□□□ -0.4
PDE6B-201ENST00000255622 ROBO3Q96MS0 1386 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 H7C1D1 291 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 FCER1AP12319 257 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 CA8P35219 290 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 TECP42680 631 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 BTDP43251 543 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 LONRF2Q1L5Z9 754 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 CCDC178Q5BJE1 867 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 C3orf20Q8ND61 904 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 PHC3Q8NDX5 983 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 HDAC6Q9UBN7 1215 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 LGALS16A8MUM7 142 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 BAG3O95817 575 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 TPP2P29144 1249 aaPredicted RBP12.54□□□□□ -0.4
PDE6B-201ENST00000255622 STK4Q13043 487 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 GPIHBP1Q8IV16 184 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 CCDC148Q8NFR7 591 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 EYA3Q99504 573 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 UBA5Q9GZZ9 404 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 AGPAT5Q9NUQ2 364 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 TMEM260Q9NX78 707 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 NDUFA10O95299 355 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 CDK8P49336 464 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 GRAPQ13588 217 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 TTI2Q6NXR4 508 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 WDR59Q6PJI9 974 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 CABP7Q86V35 215 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 AMOTL1Q8IY63 956 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 GIMAP8Q8ND71 665 aaPredicted RBP12.54□□□□□ -0.4
PDE6B-201ENST00000255622 GRAPLQ8TC17 118 aaPredicted RBP12.54□□□□□ -0.4
PDE6B-201ENST00000255622 ZNF507Q8TCN5 953 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 NAPGQ99747 312 aaPredicted RBP12.54□□□□□ -0.4
PDE6B-201ENST00000255622 DUSP9Q99956 384 aaKnown RBP12.54□□□□□ -0.4
PDE6B-201ENST00000255622 DNAJC5Q9H3Z4 198 aa12.54□□□□□ -0.4
PDE6B-201ENST00000255622 SMCO2A6NFE2 343 aa12.53□□□□□ -0.4
PDE6B-201ENST00000255622 RHOBTB3O94955 611 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms