RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 CTNND2Q9UQB3 1225 aa13.1□□□□□ -0.31
LIN28A-201ENST00000254231 STK36Q9NRP7 1315 aa13.1□□□□□ -0.31
LIN28A-201ENST00000254231 TRIM49BA6NDI0 452 aa13.1□□□□□ -0.31
LIN28A-201ENST00000254231 HUNKP57058 714 aa13.1□□□□□ -0.31
LIN28A-201ENST00000254231 CNTN2Q02246 1040 aa13.1□□□□□ -0.31
LIN28A-201ENST00000254231 GJC2Q5T442 439 aaPredicted RBP13.1□□□□□ -0.31
LIN28A-201ENST00000254231 APOBEC3FQ8IUX4 373 aaKnown RBP13.1□□□□□ -0.31
LIN28A-201ENST00000254231 FAM200AQ8TCP9 573 aa13.1□□□□□ -0.31
LIN28A-201ENST00000254231 ZMYND12Q9H0C1 365 aa13.1□□□□□ -0.31
LIN28A-201ENST00000254231 RIOX1Q9H6W3 641 aa13.1□□□□□ -0.31
LIN28A-201ENST00000254231 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.1□□□□□ -0.31
LIN28A-201ENST00000254231 SRPRBQ9Y5M8 271 aaKnown RBP13.1□□□□□ -0.31
LIN28A-201ENST00000254231 RPS12P25398 132 aaKnown RBP13.09□□□□□ -0.31
LIN28A-201ENST00000254231 LRMPQ12912 555 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 IL31RAQ8NI17 732 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 VPS16Q9H269 839 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 CCDC39Q9UFE4 941 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 BACE1P56817 501 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 ZNF445P59923 1031 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 CCDC186Q7Z3E2 898 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 ANKRD13CQ8N6S4 541 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 OPTNQ96CV9 577 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 WDR11Q9BZH6 1224 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 EHD4Q9H223 541 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 FAM86B1E9PN63 330 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 AP5Z1O43299 807 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 FAM86B2P0C5J1 330 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 IGBP1P78318 339 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 PDE4DQ08499 809 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 CLEC17AQ6ZS10 378 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.09□□□□□ -0.31
LIN28A-201ENST00000254231 FAM83AQ86UY5 434 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 KSR1Q8IVT5 923 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 SCYL3Q8IZE3 742 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 FBXL16Q8N461 479 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 SAMSN1Q9NSI8 373 aaKnown RBP13.09□□□□□ -0.31
LIN28A-201ENST00000254231 HTTP42858 3142 aa13.09□□□□□ -0.31
LIN28A-201ENST00000254231 GAS7O60861 476 aa13.08□□□□□ -0.31
LIN28A-201ENST00000254231 USP2O75604 605 aaPredicted RBP13.08□□□□□ -0.31
LIN28A-201ENST00000254231 IREB2P48200 963 aaKnown RBP13.08□□□□□ -0.31
LIN28A-201ENST00000254231 TMC6Q7Z403 805 aa13.08□□□□□ -0.31
LIN28A-201ENST00000254231 DCAF4Q8WV16 495 aa13.08□□□□□ -0.31
LIN28A-201ENST00000254231 NAT10Q9H0A0 1025 aaKnown RBP13.08□□□□□ -0.31
LIN28A-201ENST00000254231 CTNND1O60716 968 aaKnown RBP13.08□□□□□ -0.32
LIN28A-201ENST00000254231 ARP10275 920 aa13.08□□□□□ -0.32
LIN28A-201ENST00000254231 FCER1AP12319 257 aa13.08□□□□□ -0.32
LIN28A-201ENST00000254231 MAP3K9P80192 1104 aa13.08□□□□□ -0.32
LIN28A-201ENST00000254231 GRIPAP1Q4V328 841 aa13.08□□□□□ -0.32
LIN28A-201ENST00000254231 RNF207Q6ZRF8 634 aa13.08□□□□□ -0.32
LIN28A-201ENST00000254231 FAM43AQ8N2R8 423 aa13.08□□□□□ -0.32
LIN28A-201ENST00000254231 KLRG1Q96E93 195 aa13.08□□□□□ -0.32
LIN28A-201ENST00000254231 UNC80Q8N2C7 3258 aa13.08□□□□□ -0.32
LIN28A-201ENST00000254231 NFE2L3Q9Y4A8 694 aa13.08□□□□□ -0.32
LIN28A-201ENST00000254231 LRP5O75197 1615 aa13.08□□□□□ -0.32
LIN28A-201ENST00000254231 LAMA4Q16363 1823 aa13.08□□□□□ -0.32
LIN28A-201ENST00000254231 TUBGCP6Q96RT7 1819 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 LETM1O95202 739 aaPredicted RBP13.07□□□□□ -0.32
LIN28A-201ENST00000254231 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 RESP18Q5W5W9 173 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 ENGASEQ8NFI3 743 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 PAGE5Q96GU1 130 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 ZNF577Q9BSK1 485 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 POLR2AP24928 1970 aaKnown RBP13.07□□□□□ -0.32
LIN28A-201ENST00000254231 PDIA4P13667 645 aaKnown RBP13.07□□□□□ -0.32
LIN28A-201ENST00000254231 PSMC6P62333 389 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 HERC4Q5GLZ8 1057 aaPredicted RBP13.07□□□□□ -0.32
LIN28A-201ENST00000254231 LRCH2Q5VUJ6 765 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 KCNK18Q7Z418 384 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 ELMO3Q96BJ8 720 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 TAF1DQ9H5J8 278 aaPredicted RBP13.07□□□□□ -0.32
LIN28A-201ENST00000254231 GPBP1L1Q9HC44 474 aaPredicted RBP13.07□□□□□ -0.32
LIN28A-201ENST00000254231 PHF20L1A8MW92 1017 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 MEIS2O14770 477 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 CNGA1P29973 690 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 SOX10P56693 466 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 GLIS3Q8NEA6 775 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 ZBTB10Q96DT7 871 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 BHMT2Q9H2M3 363 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 IKZF4Q9H2S9 585 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 AS3MTQ9HBK9 375 aa13.07□□□□□ -0.32
LIN28A-201ENST00000254231 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
LIN28A-201ENST00000254231 GLTPD2A6NH11 291 aa13.06□□□□□ -0.32
LIN28A-201ENST00000254231 PPP6R2O75170 966 aa13.06□□□□□ -0.32
LIN28A-201ENST00000254231 TPM4P67936 248 aa13.06□□□□□ -0.32
LIN28A-201ENST00000254231 FSTL1Q12841 308 aa13.06□□□□□ -0.32
LIN28A-201ENST00000254231 TMEM87AQ8NBN3 555 aa13.06□□□□□ -0.32
LIN28A-201ENST00000254231 TRIM47Q96LD4 638 aa13.06□□□□□ -0.32
LIN28A-201ENST00000254231 MAN1B1Q9UKM7 699 aa13.06□□□□□ -0.32
LIN28A-201ENST00000254231 MRPL11Q9Y3B7 192 aaKnown RBP13.06□□□□□ -0.32
LIN28A-201ENST00000254231 MYH1P12882 1939 aa13.06□□□□□ -0.32
LIN28A-201ENST00000254231 IGKV6D-41A0A0C4DH26 115 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 CSPG5O95196 566 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 ZNF157P51786 506 aaPredicted RBP13.05□□□□□ -0.32
LIN28A-201ENST00000254231 ATP2C1P98194 919 aaPredicted RBP13.05□□□□□ -0.32
LIN28A-201ENST00000254231 COG2Q14746 738 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 GLIPR1L2Q4G1C9 344 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 TCERG1LQ5VWI1 586 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 RIC8AQ9NPQ8 531 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 TELO2Q9Y4R8 837 aa13.05□□□□□ -0.32
LIN28A-201ENST00000254231 FSD2A1L4K1 749 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms