RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 AKNAD1Q5T1N1 836 aa22.6■■□□□ 1.21
RARA-201ENST00000254066 STAMQ92783 540 aa22.6■■□□□ 1.21
RARA-201ENST00000254066 GDAQ9Y2T3 454 aa22.6■■□□□ 1.21
RARA-201ENST00000254066 LEMD3Q9Y2U8 911 aa22.6■■□□□ 1.21
RARA-201ENST00000254066 BIRC2Q13490 618 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 NAA25Q14CX7 972 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 TTC38Q5R3I4 469 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 AGBL2Q5U5Z8 902 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 PLAAQ9Y263 795 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 THSD7AQ9UPZ6 1657 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 B4DLN1 442 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 GSTA1P08263 222 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 TRAPPC10P48553 1259 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 GUCY2DQ02846 1103 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 ZSCAN29Q8IWY8 852 aaPredicted RBP22.59■■□□□ 1.21
RARA-201ENST00000254066 TTC5Q8N0Z6 440 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 CCT6BQ92526 530 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 DHTKD1Q96HY7 919 aaPredicted RBP22.59■■□□□ 1.21
RARA-201ENST00000254066 STRBPQ96SI9 672 aaKnown RBP22.59■■□□□ 1.21
RARA-201ENST00000254066 TLR10Q9BXR5 811 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 CHD4Q14839 1912 aa22.59■■□□□ 1.21
RARA-201ENST00000254066 ATP6V1G2O95670 118 aa22.58■■□□□ 1.21
RARA-201ENST00000254066 CCDC57Q2TAC2 916 aa22.58■■□□□ 1.21
RARA-201ENST00000254066 GKAP1Q5VSY0 366 aaPredicted RBP22.58■■□□□ 1.21
RARA-201ENST00000254066 SMCR8Q8TEV9 937 aaPredicted RBP22.58■■□□□ 1.21
RARA-201ENST00000254066 CUL5Q93034 780 aa22.58■■□□□ 1.21
RARA-201ENST00000254066 TATDN2Q93075 761 aa22.58■■□□□ 1.21
RARA-201ENST00000254066 TRIM47Q96LD4 638 aa22.58■■□□□ 1.21
RARA-201ENST00000254066 MLXIPQ9HAP2 919 aa22.58■■□□□ 1.21
RARA-201ENST00000254066 TTI2Q6NXR4 508 aa22.58■■□□□ 1.2
RARA-201ENST00000254066 TTLL7Q6ZT98 887 aa22.58■■□□□ 1.2
RARA-201ENST00000254066 HOMER3Q9NSC5 361 aa22.58■■□□□ 1.2
RARA-201ENST00000254066 ANKRD33BA6NCL7 494 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 PPP1R2P41236 205 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 ELF3P78545 371 aaPredicted RBP22.57■■□□□ 1.2
RARA-201ENST00000254066 PTGDRQ13258 359 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 E2F5Q15329 346 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 MFSD6Q6ZSS7 791 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 BARGINQ6ZT62 677 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 MAATS1Q7Z4T9 603 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 CCDC47Q96A33 483 aaKnown RBP22.57■■□□□ 1.2
RARA-201ENST00000254066 LRRC45Q96CN5 670 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 SPATS2LQ9NUQ6 558 aaKnown RBP22.57■■□□□ 1.2
RARA-201ENST00000254066 SWAP70Q9UH65 585 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 NUP188Q5SRE5 1749 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 TRIM49BA6NDI0 452 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 PPIP5K2O43314 1243 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 KIF11P52732 1056 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 ARL6IP4Q66PJ3 421 aaKnown RBP22.57■■□□□ 1.2
RARA-201ENST00000254066 MSL1Q68DK7 614 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 ZNF483Q8TF39 744 aaPredicted RBP22.57■■□□□ 1.2
RARA-201ENST00000254066 IFT81Q8WYA0 676 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 TNFRSF25Q93038 417 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 NOX5Q96PH1 765 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 SH3GL3Q99963 347 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 NOD2Q9HC29 1040 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 SLC24A3Q9HC58 644 aa22.57■■□□□ 1.2
RARA-201ENST00000254066 AKAP11Q9UKA4 1901 aa22.56■■□□□ 1.2
RARA-201ENST00000254066 FAM205CA6NFA0 338 aa22.56■■□□□ 1.2
RARA-201ENST00000254066 LONP1P36776 959 aaKnown RBP22.56■■□□□ 1.2
RARA-201ENST00000254066 ZNF513Q8N8E2 541 aaPredicted RBP22.56■■□□□ 1.2
RARA-201ENST00000254066 HVCN1Q96D96 273 aa22.56■■□□□ 1.2
RARA-201ENST00000254066 THRAP3Q9Y2W1 955 aaKnown RBP22.56■■□□□ 1.2
RARA-201ENST00000254066 MYH6P13533 1939 aa22.56■■□□□ 1.2
RARA-201ENST00000254066 BICDL2A1A5D9 508 aa22.56■■□□□ 1.2
RARA-201ENST00000254066 PRPF3O43395 683 aaKnown RBP22.56■■□□□ 1.2
RARA-201ENST00000254066 RHOBTB3O94955 611 aa22.56■■□□□ 1.2
RARA-201ENST00000254066 MCAMP43121 646 aa22.56■■□□□ 1.2
RARA-201ENST00000254066 KLHDC7AQ5VTJ3 777 aa22.56■■□□□ 1.2
RARA-201ENST00000254066 ZNF654Q8IZM8 581 aa22.56■■□□□ 1.2
RARA-201ENST00000254066 CASKIN2Q8WXE0 1202 aa22.56■■□□□ 1.2
RARA-201ENST00000254066 NAPBQ9H115 298 aa22.56■■□□□ 1.2
RARA-201ENST00000254066 SSBP05455 408 aaKnown RBP eCLIP22.55■■□□□ 1.2
RARA-201ENST00000254066 MYBP10242 640 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 PPP2R2AP63151 447 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 MRPS25P82663 173 aaKnown RBP22.55■■□□□ 1.2
RARA-201ENST00000254066 BYSLQ13895 437 aaKnown RBP22.55■■□□□ 1.2
RARA-201ENST00000254066 ZNF174Q15697 407 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 EARS2Q5JPH6 523 aaKnown RBP22.55■■□□□ 1.2
RARA-201ENST00000254066 FKBP15Q5T1M5 1219 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 KRT26Q7Z3Y9 468 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 IFNL3Q8IZI9 196 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 GIMAP8Q8ND71 665 aaPredicted RBP22.55■■□□□ 1.2
RARA-201ENST00000254066 TAF1DQ9H5J8 278 aaPredicted RBP22.55■■□□□ 1.2
RARA-201ENST00000254066 ARHGAP20Q9P2F6 1191 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 ZNF532Q9HCE3 1301 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 RTL9Q8NET4 1388 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 H0YGN5 161 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 CXCR5P32302 372 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 PMS1P54277 932 aaKnown RBP22.55■■□□□ 1.2
RARA-201ENST00000254066 CUL1Q13616 776 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 ISCUQ9H1K1 167 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 NFS1Q9Y697 457 aa22.55■■□□□ 1.2
RARA-201ENST00000254066 HPDP32754 393 aaPredicted RBP22.54■■□□□ 1.2
RARA-201ENST00000254066 CCNHP51946 323 aaPredicted RBP22.54■■□□□ 1.2
RARA-201ENST00000254066 PKN1Q16512 942 aa22.54■■□□□ 1.2
RARA-201ENST00000254066 SPRED3Q2MJR0 410 aa22.54■■□□□ 1.2
RARA-201ENST00000254066 ZC3H12AQ5D1E8 599 aaKnown RBP22.54■■□□□ 1.2
RARA-201ENST00000254066 CENPTQ96BT3 561 aa22.54■■□□□ 1.2
RARA-201ENST00000254066 MAPK8IP1Q9UQF2 711 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms