RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 TRAIPQ9BWF2 469 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 UPF3AQ9H1J1 476 aaKnown RBP14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 DDX28Q9NUL7 540 aaKnown RBP14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 MAGEB6P1A0A0J9YX57 407 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 EXOC3O60645 756 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 NBPF20Q3BBV1 942 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 TEX9Q8N6V9 391 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 PBKQ96KB5 322 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 PANX2Q96RD6 677 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 RAB20Q9NX57 234 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 WARS2Q9UGM6 360 aaKnown RBP14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 FAM135BQ49AJ0 1406 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 TXKP42681 527 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 DPCR1Q3MIW9 517 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 C11orf57Q6ZUT1 292 aaPredicted RBP14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 SNX29Q8TEQ0 813 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 JAG2Q9Y219 1238 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 STK24Q9Y6E0 443 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 PHKG2P15735 406 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 ITGA6P23229 1130 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 PPP2R5CQ13362 524 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 SARM1Q6SZW1 724 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 GSDMAQ96QA5 445 aa14.29□□□□□ -0.12
PCDHGA3-201ENST00000253812 NLRP1Q9C000 1473 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 SLCO1A2P46721 670 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 MRPS35P82673 323 aaKnown RBP14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 RBL2Q08999 1139 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 NCAPH2Q6IBW4 605 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 DYMQ7RTS9 669 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 CABP7Q86V35 215 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 CDKL2Q92772 493 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 ZNF274Q96GC6 653 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 CHAMP1Q96JM3 812 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 UIMC1Q96RL1 719 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 TRIM56Q9BRZ2 755 aaKnown RBP14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 ETNK1Q9HBU6 452 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 ZNF148Q9UQR1 794 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 CDC42BPAQ5VT25 1732 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 E9PMD0 336 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 DAPK3O43293 454 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 SMTNP53814 917 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 NAA30Q147X3 362 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 ARHGAP44Q17R89 818 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 NUDCD1Q96RS6 583 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 ANKFY1Q9P2R3 1169 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 EXOC7Q9UPT5 735 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 DAB1O75553 588 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 APOA1P02647 267 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 STX1BP61266 288 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 CYLC2Q14093 348 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 TNNI3KQ59H18 835 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 NELFCDQ8IXH7 590 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 FAM227BQ96M60 508 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 FTOQ9C0B1 505 aaKnown RBP eCLIP14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 ZMYND12Q9H0C1 365 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 PSD3Q9NYI0 1048 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 DONSONQ9NYP3 566 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 CCNL1Q9UK58 526 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 FPGT-TNNI3KV9GXZ4 949 aa14.28□□□□□ -0.12
PCDHGA3-201ENST00000253812 GNGT2O14610 69 aa14.27□□□□□ -0.12
PCDHGA3-201ENST00000253812 GTPBP6O43824 516 aaPredicted RBP14.27□□□□□ -0.12
PCDHGA3-201ENST00000253812 CA4P22748 312 aa14.27□□□□□ -0.12
PCDHGA3-201ENST00000253812 AP2B1P63010 937 aa14.27□□□□□ -0.12
PCDHGA3-201ENST00000253812 MAGEB6Q8N7X4 407 aa14.27□□□□□ -0.12
PCDHGA3-201ENST00000253812 KRT82Q9NSB4 513 aa14.27□□□□□ -0.12
PCDHGA3-201ENST00000253812 NDE1Q9NXR1 346 aa14.27□□□□□ -0.12
PCDHGA3-201ENST00000253812 PLAAQ9Y263 795 aa14.27□□□□□ -0.12
PCDHGA3-201ENST00000253812 ABCC3O15438 1527 aa14.27□□□□□ -0.12
PCDHGA3-201ENST00000253812 AATKQ6ZMQ8 1374 aa14.27□□□□□ -0.12
PCDHGA3-201ENST00000253812 APLFQ8IW19 511 aaPredicted RBP14.27□□□□□ -0.12
PCDHGA3-201ENST00000253812 NFU1Q9UMS0 254 aa14.27□□□□□ -0.12
PCDHGA3-201ENST00000253812 GSTA1P08263 222 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 GSTA2P09210 222 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 HARSP12081 509 aaKnown RBP14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 GARSP41250 739 aaKnown RBP14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 TRPC1P48995 793 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 POLR2FP61218 127 aaKnown RBP14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 ADCY1Q08828 1119 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 TMED2Q15363 201 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 PTPROQ16827 1216 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 KRT25Q7Z3Z0 450 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 USP44Q9H0E7 712 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 TBC1D23Q9NUY8 699 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 ARMCX3Q9UH62 379 aaPredicted RBP14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 ECM2O94769 699 aaPredicted RBP14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 PYGBP11216 843 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 NONOQ15233 471 aaKnown RBP eCLIP14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 TRIM60Q495X7 471 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 ARHGEF25Q86VW2 580 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 MCF2L2Q86YR7 1114 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 ACRBPQ8NEB7 543 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 HIC2Q96JB3 615 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 RTEL1Q9NZ71 1219 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 LZTS1Q9Y250 596 aa14.27□□□□□ -0.13
PCDHGA3-201ENST00000253812 CCNT1O60563 726 aaKnown RBP14.26□□□□□ -0.13
PCDHGA3-201ENST00000253812 DIAPH2O60879 1101 aa14.26□□□□□ -0.13
PCDHGA3-201ENST00000253812 DTNBO60941 627 aa14.26□□□□□ -0.13
PCDHGA3-201ENST00000253812 SLFN14P0C7P3 912 aa14.26□□□□□ -0.13
PCDHGA3-201ENST00000253812 RAP1GDS1P52306 607 aa14.26□□□□□ -0.13
PCDHGA3-201ENST00000253812 ART3Q13508 389 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms