RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 HUNKP57058 714 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 RPS6P62753 249 aaKnown RBP14.65□□□□□ -0.06
HIF3A-201ENST00000244302 FAM160A1Q05DH4 1040 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 CCDC183Q5T5S1 534 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 GRAMD1CQ8IYS0 662 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 FAM177A1Q8N128 213 aaPredicted RBP14.65□□□□□ -0.06
HIF3A-201ENST00000244302 PTPN18Q99952 460 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 GPBP1L1Q9HC44 474 aaPredicted RBP14.65□□□□□ -0.06
HIF3A-201ENST00000244302 RNF146Q9NTX7 359 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 HOXC10Q9NYD6 342 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 CEP131Q9UPN4 1083 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 ABCB11O95342 1321 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 PIK3CDO00329 1044 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 POLR2DO15514 142 aaKnown RBP14.65□□□□□ -0.06
HIF3A-201ENST00000244302 NEMFO60524 1076 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 OFD1O75665 1012 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 CNMDO75829 334 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 BAATQ14032 418 aaPredicted RBP14.65□□□□□ -0.06
HIF3A-201ENST00000244302 CCDC73Q6ZRK6 1079 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 JMYQ8N9B5 988 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 LRRC15Q8TF66 581 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 BRI3BPQ8WY22 251 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 MTMR9Q96QG7 549 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 KCNH3Q9ULD8 1083 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 CASP1P29466 404 aa14.64□□□□□ -0.07
HIF3A-201ENST00000244302 HOXA7P31268 230 aaPredicted RBP14.64□□□□□ -0.07
HIF3A-201ENST00000244302 STAT3P40763 770 aa14.64□□□□□ -0.07
HIF3A-201ENST00000244302 HERVK_113P62684 666 aa14.64□□□□□ -0.07
HIF3A-201ENST00000244302 ZRSR1Q15695 479 aaKnown RBP14.64□□□□□ -0.07
HIF3A-201ENST00000244302 PRR16Q569H4 304 aa14.64□□□□□ -0.07
HIF3A-201ENST00000244302 LBX2Q6XYB7 198 aa14.64□□□□□ -0.07
HIF3A-201ENST00000244302 SYTL5Q8TDW5 730 aaPredicted RBP14.64□□□□□ -0.07
HIF3A-201ENST00000244302 STAMQ92783 540 aa14.64□□□□□ -0.07
HIF3A-201ENST00000244302 NUP62CLQ9H1M0 184 aa14.64□□□□□ -0.07
HIF3A-201ENST00000244302 RBPJLQ9UBG7 517 aa14.64□□□□□ -0.07
HIF3A-201ENST00000244302 DDX25Q9UHL0 483 aaKnown RBP14.64□□□□□ -0.07
HIF3A-201ENST00000244302 AGTPBP1Q9UPW5 1226 aa14.64□□□□□ -0.07
HIF3A-201ENST00000244302 BTBD19C9JJ37 291 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 ZNF500O60304 480 aaPredicted RBP14.63□□□□□ -0.07
HIF3A-201ENST00000244302 SYKP43405 635 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 IRX3P78415 501 aaPredicted RBP14.63□□□□□ -0.07
HIF3A-201ENST00000244302 FSTL1Q12841 308 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 PROCA1Q8NCQ7 364 aaPredicted RBP14.63□□□□□ -0.07
HIF3A-201ENST00000244302 LENG9Q96B70 501 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 NUDT12Q9BQG2 462 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 CLSTN2Q9H4D0 955 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 CCL15-CCL14A0A0B4J2E2 113 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 POTEMA6NI47 508 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 OR52Z1P0C646 297 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 EIF2AK2P19525 551 aaKnown RBP14.63□□□□□ -0.07
HIF3A-201ENST00000244302 SREBF1P36956 1147 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 HSD17B4P51659 736 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 SNAPC2Q13487 334 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 CALCRLQ16602 461 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 CCL15Q16663 113 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 SPRYD7Q5W111 196 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 DTHD1Q6ZMT9 781 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 ZIC5Q96T25 663 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 SERTAD1Q9UHV2 236 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 CEP350Q5VT06 3117 aa14.63□□□□□ -0.07
HIF3A-201ENST00000244302 AP3B2Q13367 1082 aa14.62□□□□□ -0.07
HIF3A-201ENST00000244302 KARSQ15046 597 aaKnown RBP14.62□□□□□ -0.07
HIF3A-201ENST00000244302 ISM2Q6H9L7 571 aa14.62□□□□□ -0.07
HIF3A-201ENST00000244302 TNMDQ9H2S6 317 aa14.62□□□□□ -0.07
HIF3A-201ENST00000244302 GLIPR1L2Q4G1C9 344 aa14.62□□□□□ -0.07
HIF3A-201ENST00000244302 PPP4R3AQ6IN85 833 aa14.62□□□□□ -0.07
HIF3A-201ENST00000244302 RNF207Q6ZRF8 634 aa14.62□□□□□ -0.07
HIF3A-201ENST00000244302 SAPCD2Q86UD0 394 aa14.62□□□□□ -0.07
HIF3A-201ENST00000244302 FERMT2Q96AC1 680 aa14.62□□□□□ -0.07
HIF3A-201ENST00000244302 DHX58Q96C10 678 aa14.62□□□□□ -0.07
HIF3A-201ENST00000244302 TEX13BQ9BXU2 312 aa14.62□□□□□ -0.07
HIF3A-201ENST00000244302 A1CFQ9NQ94 594 aaKnown RBP14.62□□□□□ -0.07
HIF3A-201ENST00000244302 CCDC39Q9UFE4 941 aa14.62□□□□□ -0.07
HIF3A-201ENST00000244302 FAM237AA0A1B0GTK4 181 aa14.61□□□□□ -0.07
HIF3A-201ENST00000244302 PDHXO00330 501 aa14.61□□□□□ -0.07
HIF3A-201ENST00000244302 KINO60870 393 aaKnown RBP14.61□□□□□ -0.07
HIF3A-201ENST00000244302 ZNF157P51786 506 aaPredicted RBP14.61□□□□□ -0.07
HIF3A-201ENST00000244302 CNTN2Q02246 1040 aa14.61□□□□□ -0.07
HIF3A-201ENST00000244302 GRM1Q13255 1194 aa14.61□□□□□ -0.07
HIF3A-201ENST00000244302 ZNF579Q8NAF0 562 aaKnown RBP14.61□□□□□ -0.07
HIF3A-201ENST00000244302 SDF4Q9BRK5 362 aa14.61□□□□□ -0.07
HIF3A-201ENST00000244302 MMTAG2Q9BU76 263 aaKnown RBP14.61□□□□□ -0.07
HIF3A-201ENST00000244302 GLT8D2Q9H1C3 349 aa14.61□□□□□ -0.07
HIF3A-201ENST00000244302 TTC12Q9H892 705 aaPredicted RBP14.61□□□□□ -0.07
HIF3A-201ENST00000244302 PKD2L1Q9P0L9 805 aa14.61□□□□□ -0.07
HIF3A-201ENST00000244302 BRCA2P51587 3418 aa14.61□□□□□ -0.07
HIF3A-201ENST00000244302 PASKQ96RG2 1323 aa14.61□□□□□ -0.07
HIF3A-201ENST00000244302 IGLV3-22A0A075B6J6 115 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 FOSP01100 380 aaPredicted RBP14.6□□□□□ -0.07
HIF3A-201ENST00000244302 PRR29P0C7W0 189 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 ARP10275 920 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 ITGB5P18084 799 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 USP11P51784 963 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 MRPS9P82933 396 aaKnown RBP14.6□□□□□ -0.07
HIF3A-201ENST00000244302 PNOCQ13519 176 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 ECM1Q16610 540 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 ARL6IP4Q66PJ3 421 aaKnown RBP14.6□□□□□ -0.07
HIF3A-201ENST00000244302 RNF214Q8ND24 703 aa14.6□□□□□ -0.07
HIF3A-201ENST00000244302 MOV10L1Q9BXT6 1211 aaKnown RBP14.6□□□□□ -0.07
HIF3A-201ENST00000244302 SPATC1LQ9H0A9 340 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms