RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 SMC3Q9UQE7 1217 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 LAMB4A4D0S4 1761 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 MED23Q9ULK4 1368 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 FANCGO15287 622 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 STX6O43752 255 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 LETM1O95202 739 aaPredicted RBP9.29□□□□□ -0.92
CXCR4-201ENST00000241393 CTSBP07858 339 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 CASTP20810 708 aaKnown RBP9.29□□□□□ -0.92
CXCR4-201ENST00000241393 EIF6P56537 245 aaKnown RBP9.29□□□□□ -0.92
CXCR4-201ENST00000241393 PTPN11Q06124 597 aaPredicted RBP9.29□□□□□ -0.92
CXCR4-201ENST00000241393 AIMP1Q12904 312 aaKnown RBP9.29□□□□□ -0.92
CXCR4-201ENST00000241393 ANKRD1Q15327 319 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 TNNI3KQ59H18 835 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 FBXW10Q5XX13 1052 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 COPS6Q7L5N1 327 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 ZSCAN30Q86W11 494 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 MCF2L2Q86YR7 1114 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 CKAP2LQ8IYA6 745 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 FBXO27Q8NI29 283 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 EHMT1Q9H9B1 1298 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 PDRG1Q9NUG6 133 aa9.29□□□□□ -0.92
CXCR4-201ENST00000241393 SPATA31A3Q5VYP0 1347 aa9.28□□□□□ -0.92
CXCR4-201ENST00000241393 F8W735 103 aaPredicted RBP9.28□□□□□ -0.92
CXCR4-201ENST00000241393 ATP5JP18859 108 aa9.28□□□□□ -0.92
CXCR4-201ENST00000241393 PTH1RQ03431 593 aa9.28□□□□□ -0.92
CXCR4-201ENST00000241393 SOX4Q06945 474 aaPredicted RBP9.28□□□□□ -0.92
CXCR4-201ENST00000241393 SLC39A6Q13433 755 aa9.28□□□□□ -0.92
CXCR4-201ENST00000241393 CREB3L3Q68CJ9 461 aa9.28□□□□□ -0.92
CXCR4-201ENST00000241393 LRFN4Q6PJG9 635 aa9.28□□□□□ -0.92
CXCR4-201ENST00000241393 NOL8Q76FK4 1167 aaKnown RBP9.28□□□□□ -0.92
CXCR4-201ENST00000241393 CDC37L1Q7L3B6 337 aa9.28□□□□□ -0.92
CXCR4-201ENST00000241393 CYFIP1Q7L576 1253 aa9.28□□□□□ -0.92
CXCR4-201ENST00000241393 FAM184AQ8NB25 1140 aa9.28□□□□□ -0.92
CXCR4-201ENST00000241393 JAKMIP1Q96N16 626 aaKnown RBP9.28□□□□□ -0.92
CXCR4-201ENST00000241393 ADAM30Q9UKF2 790 aa9.28□□□□□ -0.92
CXCR4-201ENST00000241393 RBM8AQ9Y5S9 174 aaKnown RBP9.28□□□□□ -0.92
CXCR4-201ENST00000241393 CYP27B1O15528 508 aa9.27□□□□□ -0.93
CXCR4-201ENST00000241393 GAS2O43903 313 aaKnown RBP9.27□□□□□ -0.93
CXCR4-201ENST00000241393 ATE1O95260 518 aa9.27□□□□□ -0.93
CXCR4-201ENST00000241393 ADH5P11766 374 aa9.27□□□□□ -0.93
CXCR4-201ENST00000241393 SYT1P21579 422 aa9.27□□□□□ -0.93
CXCR4-201ENST00000241393 MCM5P33992 734 aa9.27□□□□□ -0.93
CXCR4-201ENST00000241393 RFX5P48382 616 aaPredicted RBP9.27□□□□□ -0.93
CXCR4-201ENST00000241393 UBE2HP62256 183 aa9.27□□□□□ -0.93
CXCR4-201ENST00000241393 ETF1P62495 437 aaKnown RBP9.27□□□□□ -0.93
CXCR4-201ENST00000241393 NMIQ13287 307 aaPredicted RBP9.27□□□□□ -0.93
CXCR4-201ENST00000241393 KRT32Q14532 448 aa9.27□□□□□ -0.93
CXCR4-201ENST00000241393 GK5Q6ZS86 529 aa9.27□□□□□ -0.93
CXCR4-201ENST00000241393 PLBD2Q8NHP8 589 aa9.27□□□□□ -0.93
CXCR4-201ENST00000241393 ZNF507Q8TCN5 953 aa9.27□□□□□ -0.93
CXCR4-201ENST00000241393 MYD88Q99836 296 aa9.27□□□□□ -0.93
CXCR4-201ENST00000241393 PCDHB14Q9Y5E9 798 aa9.27□□□□□ -0.93
CXCR4-201ENST00000241393 GLI3P10071 1580 aa9.27□□□□□ -0.93
CXCR4-201ENST00000241393 SYCE3A1L190 88 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 DCDC2CA8MYV0 355 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 GFRA2O00451 464 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 SLC27A2O14975 620 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 WISP1O95388 367 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 PDCP20941 246 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 UVSSAQ2YD98 709 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.26□□□□□ -0.93
CXCR4-201ENST00000241393 FSD1Q9BTV5 496 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 TSPY26PQ9H489 355 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 CRIM1Q9NZV1 1036 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 ZNRF3Q9ULT6 936 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 ARFGEF2Q9Y6D5 1785 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 PRAMEF27A3QJZ7 478 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 DLGAP3O95886 979 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 MYL6BP14649 208 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 KCNJ4P48050 445 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 CASP7P55210 303 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 GRIK4Q16099 956 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 ADCK5Q3MIX3 580 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 CCDC183Q5T5S1 534 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 DYMQ7RTS9 669 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 RNF214Q8ND24 703 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 WDR89Q96FK6 387 aaPredicted RBP9.26□□□□□ -0.93
CXCR4-201ENST00000241393 WNT10AQ9GZT5 417 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 CCDC8Q9H0W5 538 aaPredicted RBP9.26□□□□□ -0.93
CXCR4-201ENST00000241393 GPR108Q9NPR9 543 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 USP16Q9Y5T5 823 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 FPGT-TNNI3KV9GXZ4 949 aa9.26□□□□□ -0.93
CXCR4-201ENST00000241393 PCDH11XQ9BZA7 1347 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 PCDH11YQ9BZA8 1340 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 ERVV-2B6SEH9 535 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 TMPRSS2O15393 492 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 GLB1P16278 677 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 PLCG1P19174 1290 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
CXCR4-201ENST00000241393 USP11P51784 963 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 INPP5AQ14642 412 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 EPHA10Q5JZY3 1008 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 BLOC1S2Q6QNY1 142 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 FAM227BQ96M60 508 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 BOLA2Q9H3K6 86 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 SSU72Q9NP77 194 aaKnown RBP9.25□□□□□ -0.93
CXCR4-201ENST00000241393 NOL7Q9UMY1 257 aaKnown RBP9.25□□□□□ -0.93
CXCR4-201ENST00000241393 MTMR6Q9Y217 621 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 HIF3AQ9Y2N7 669 aa9.25□□□□□ -0.93
CXCR4-201ENST00000241393 PCDHGC5Q9Y5F6 944 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms