RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 BCS1LQ9Y276 419 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 GDAQ9Y2T3 454 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 FAM160B2Q86V87 743 aa26.11■■□□□ 1.77
MSX2-201ENST00000239243 SLFN12Q8IYM2 578 aa26.11■■□□□ 1.77
MSX2-201ENST00000239243 ANKRD20A12PQ8NF67 263 aa26.11■■□□□ 1.77
MSX2-201ENST00000239243 EXOC1Q9NV70 894 aa26.11■■□□□ 1.77
MSX2-201ENST00000239243 POTEMA6NI47 508 aa26.11■■□□□ 1.77
MSX2-201ENST00000239243 FAM83BQ5T0W9 1011 aa26.11■■□□□ 1.77
MSX2-201ENST00000239243 PRIMPOLQ96LW4 560 aa26.11■■□□□ 1.77
MSX2-201ENST00000239243 KDM3AQ9Y4C1 1321 aa26.1■■□□□ 1.77
MSX2-201ENST00000239243 PSMA7O14818 248 aa26.1■■□□□ 1.77
MSX2-201ENST00000239243 TPM2P07951 284 aa26.1■■□□□ 1.77
MSX2-201ENST00000239243 HOXA7P31268 230 aaPredicted RBP26.1■■□□□ 1.77
MSX2-201ENST00000239243 SNAP25P60880 206 aa26.1■■□□□ 1.77
MSX2-201ENST00000239243 ARHGAP4P98171 946 aa26.1■■□□□ 1.77
MSX2-201ENST00000239243 CDAN1Q8IWY9 1227 aa26.1■■□□□ 1.77
MSX2-201ENST00000239243 CRYGNQ8WXF5 182 aa26.1■■□□□ 1.77
MSX2-201ENST00000239243 LARP4BQ92615 738 aaKnown RBP26.1■■□□□ 1.77
MSX2-201ENST00000239243 H7C1D1 291 aa26.1■■□□□ 1.77
MSX2-201ENST00000239243 PIK3CDO00329 1044 aa26.1■■□□□ 1.77
MSX2-201ENST00000239243 ASIC1P78348 528 aa26.1■■□□□ 1.77
MSX2-201ENST00000239243 RASA3Q14644 834 aa26.1■■□□□ 1.77
MSX2-201ENST00000239243 PNMA5Q96PV4 448 aa26.1■■□□□ 1.77
MSX2-201ENST00000239243 KCNMB3Q9NPA1 279 aa26.1■■□□□ 1.77
MSX2-201ENST00000239243 SREBF1P36956 1147 aa26.09■■□□□ 1.77
MSX2-201ENST00000239243 APTXQ7Z2E3 356 aaKnown RBP26.09■■□□□ 1.77
MSX2-201ENST00000239243 NT5C3AQ9H0P0 336 aa26.09■■□□□ 1.77
MSX2-201ENST00000239243 GINM1Q9NU53 330 aa26.09■■□□□ 1.77
MSX2-201ENST00000239243 TBX3O15119 743 aa26.08■■□□□ 1.77
MSX2-201ENST00000239243 TBX2Q13207 712 aaPredicted RBP26.08■■□□□ 1.77
MSX2-201ENST00000239243 TMEM119Q4V9L6 283 aa26.08■■□□□ 1.77
MSX2-201ENST00000239243 DHTKD1Q96HY7 919 aaPredicted RBP26.08■■□□□ 1.77
MSX2-201ENST00000239243 BLOC1S4Q9NUP1 217 aa26.08■■□□□ 1.77
MSX2-201ENST00000239243 PDE4DQ08499 809 aa26.08■■□□□ 1.77
MSX2-201ENST00000239243 KIAA1755Q5JYT7 1200 aa26.08■■□□□ 1.77
MSX2-201ENST00000239243 CNNM4Q6P4Q7 775 aa26.08■■□□□ 1.77
MSX2-201ENST00000239243 ADD3Q9UEY8 706 aaKnown RBP26.08■■□□□ 1.77
MSX2-201ENST00000239243 LIMA1Q9UHB6 759 aaKnown RBP26.08■■□□□ 1.77
MSX2-201ENST00000239243 FEM1BQ9UK73 627 aa26.08■■□□□ 1.77
MSX2-201ENST00000239243 R3HDM1Q15032 1099 aaKnown RBP26.07■■□□□ 1.76
MSX2-201ENST00000239243 Q4G0T1 1027 aa26.07■■□□□ 1.76
MSX2-201ENST00000239243 RAD54LQ92698 747 aa26.07■■□□□ 1.76
MSX2-201ENST00000239243 SGIP1Q9BQI5 828 aa26.07■■□□□ 1.76
MSX2-201ENST00000239243 RANBP17Q9H2T7 1088 aaKnown RBP26.07■■□□□ 1.76
MSX2-201ENST00000239243 PVALEFA0A1B0GWK0 134 aa26.07■■□□□ 1.76
MSX2-201ENST00000239243 COBLL1Q53SF7 1204 aa26.07■■□□□ 1.76
MSX2-201ENST00000239243 HYIQ5T013 277 aa26.07■■□□□ 1.76
MSX2-201ENST00000239243 LRRC10BA6NIK2 292 aa26.06■■□□□ 1.76
MSX2-201ENST00000239243 STK24Q9Y6E0 443 aa26.06■■□□□ 1.76
MSX2-201ENST00000239243 SHTN1A0MZ66 631 aa26.06■■□□□ 1.76
MSX2-201ENST00000239243 NOC3LQ8WTT2 800 aaKnown RBP26.06■■□□□ 1.76
MSX2-201ENST00000239243 MAPK8IP1Q9UQF2 711 aa26.06■■□□□ 1.76
MSX2-201ENST00000239243 BICDL2A1A5D9 508 aa26.05■■□□□ 1.76
MSX2-201ENST00000239243 CIITAP33076 1130 aa26.05■■□□□ 1.76
MSX2-201ENST00000239243 KIFC2Q96AC6 838 aa26.05■■□□□ 1.76
MSX2-201ENST00000239243 ATAD5Q96QE3 1844 aa26.05■■□□□ 1.76
MSX2-201ENST00000239243 PSDA5PKW4 1024 aaPredicted RBP26.04■■□□□ 1.76
MSX2-201ENST00000239243 FZD9O00144 591 aa26.04■■□□□ 1.76
MSX2-201ENST00000239243 OPLAHO14841 1288 aa26.04■■□□□ 1.76
MSX2-201ENST00000239243 MCM6Q14566 821 aa26.04■■□□□ 1.76
MSX2-201ENST00000239243 UNC13DQ70J99 1090 aa26.04■■□□□ 1.76
MSX2-201ENST00000239243 MICALL2Q8IY33 904 aa26.04■■□□□ 1.76
MSX2-201ENST00000239243 CCAR2Q8N163 923 aaKnown RBP26.04■■□□□ 1.76
MSX2-201ENST00000239243 TMX1Q9H3N1 280 aa26.04■■□□□ 1.76
MSX2-201ENST00000239243 MRPL11Q9Y3B7 192 aaKnown RBP26.04■■□□□ 1.76
MSX2-201ENST00000239243 PHF20L1A8MW92 1017 aa26.04■■□□□ 1.76
MSX2-201ENST00000239243 CCP110O43303 1012 aa26.04■■□□□ 1.76
MSX2-201ENST00000239243 CYP3A4P08684 503 aa26.04■■□□□ 1.76
MSX2-201ENST00000239243 GMPSP49915 693 aaPredicted RBP26.04■■□□□ 1.76
MSX2-201ENST00000239243 TCP11X2Q5H9J9 407 aa26.04■■□□□ 1.76
MSX2-201ENST00000239243 C16orf45Q96MC5 204 aaPredicted RBP26.04■■□□□ 1.76
MSX2-201ENST00000239243 TEPSINQ96N21 525 aa26.04■■□□□ 1.76
MSX2-201ENST00000239243 FEZ1Q99689 392 aa26.04■■□□□ 1.76
MSX2-201ENST00000239243 THAP9Q9H5L6 903 aa26.04■■□□□ 1.76
MSX2-201ENST00000239243 GOLGB1Q14789 3259 aaKnown RBP26.04■■□□□ 1.76
MSX2-201ENST00000239243 KCNJ18B7U540 433 aa26.03■■□□□ 1.76
MSX2-201ENST00000239243 CCT6AP40227 531 aaKnown RBP26.03■■□□□ 1.76
MSX2-201ENST00000239243 KCNJ12Q14500 433 aa26.03■■□□□ 1.76
MSX2-201ENST00000239243 ZYXQ15942 572 aaKnown RBP26.03■■□□□ 1.76
MSX2-201ENST00000239243 HAUS3Q68CZ6 603 aa26.03■■□□□ 1.76
MSX2-201ENST00000239243 FAM20AQ96MK3 541 aa26.03■■□□□ 1.76
MSX2-201ENST00000239243 KRT31Q15323 416 aa26.03■■□□□ 1.76
MSX2-201ENST00000239243 PRR16Q569H4 304 aa26.03■■□□□ 1.76
MSX2-201ENST00000239243 P2RX7Q99572 595 aaKnown RBP26.03■■□□□ 1.76
MSX2-201ENST00000239243 NUDT12Q9BQG2 462 aa26.03■■□□□ 1.76
MSX2-201ENST00000239243 EHMT1Q9H9B1 1298 aa26.03■■□□□ 1.76
MSX2-201ENST00000239243 MYMKA6NI61 221 aa26.02■■□□□ 1.76
MSX2-201ENST00000239243 EEF1GP26641 437 aaKnown RBP26.02■■□□□ 1.76
MSX2-201ENST00000239243 ERMNQ8TAM6 284 aa26.02■■□□□ 1.76
MSX2-201ENST00000239243 ETNPPLQ8TBG4 499 aa26.02■■□□□ 1.76
MSX2-201ENST00000239243 LPAR1Q92633 364 aa26.02■■□□□ 1.76
MSX2-201ENST00000239243 TRIM47Q96LD4 638 aa26.02■■□□□ 1.76
MSX2-201ENST00000239243 CNOT7Q9UIV1 285 aaKnown RBP26.02■■□□□ 1.76
MSX2-201ENST00000239243 ABCB11O95342 1321 aa26.02■■□□□ 1.76
MSX2-201ENST00000239243 ITIH6Q6UXX5 1313 aa26.02■■□□□ 1.76
MSX2-201ENST00000239243 TNNT1P13805 278 aa26.02■■□□□ 1.76
MSX2-201ENST00000239243 CCNE1P24864 410 aa26.02■■□□□ 1.76
MSX2-201ENST00000239243 PBX1P40424 430 aa26.02■■□□□ 1.76
MSX2-201ENST00000239243 GJA3Q9Y6H8 435 aa26.02■■□□□ 1.76
MSX2-201ENST00000239243 GCOM1H8Y6P7 765 aaPredicted RBP26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms