RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CCDC17Q96LX7 622 aa24.53■■□□□ 1.52
SMARCD2-201ENST00000225742 NOC4LQ9BVI4 516 aaKnown RBP24.53■■□□□ 1.52
SMARCD2-201ENST00000225742 USP40Q9NVE5 1235 aa24.53■■□□□ 1.52
SMARCD2-201ENST00000225742 AFF2P51816 1311 aa24.52■■□□□ 1.52
SMARCD2-201ENST00000225742 FCER1AP12319 257 aa24.52■■□□□ 1.52
SMARCD2-201ENST00000225742 CLK2P49760 499 aaKnown RBP24.52■■□□□ 1.52
SMARCD2-201ENST00000225742 TMEM119Q4V9L6 283 aa24.52■■□□□ 1.52
SMARCD2-201ENST00000225742 KIAA0895Q8NCT3 520 aa24.52■■□□□ 1.52
SMARCD2-201ENST00000225742 CUL5Q93034 780 aa24.52■■□□□ 1.52
SMARCD2-201ENST00000225742 MTMR8Q96EF0 704 aa24.52■■□□□ 1.52
SMARCD2-201ENST00000225742 UBXN6Q9BZV1 441 aa24.52■■□□□ 1.52
SMARCD2-201ENST00000225742 EHD4Q9H223 541 aa24.52■■□□□ 1.52
SMARCD2-201ENST00000225742 GPCPD1Q9NPB8 672 aa24.52■■□□□ 1.52
SMARCD2-201ENST00000225742 RAB21Q9UL25 225 aa24.52■■□□□ 1.52
SMARCD2-201ENST00000225742 EIF3CLB5ME19 914 aaKnown RBP24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 TBC1D8O95759 1140 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 TRIM21P19474 475 aaKnown RBP24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 LRRC63Q05C16 580 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 MIIPQ5JXC2 388 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 ADGRF4Q8IZF3 695 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 EIF3CQ99613 913 aaKnown RBP24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 DDX4Q9NQI0 724 aaKnown RBP24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 ANKRD31Q8N7Z5 1873 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 CTAGE15A4D2H0 777 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 MYMKA6NI61 221 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 CTAGE8P0CG41 777 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 SHMT1P34896 483 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 AMPD2Q01433 879 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 CTAGE6Q86UF2 777 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 CTAGE4Q8IX94 777 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 SEMA6BQ9H3T3 888 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 MYO6Q9UM54 1294 aa24.51■■□□□ 1.51
SMARCD2-201ENST00000225742 SLC37A4O43826 429 aa24.5■■□□□ 1.51
SMARCD2-201ENST00000225742 EDIL3O43854 480 aa24.5■■□□□ 1.51
SMARCD2-201ENST00000225742 IPO7O95373 1038 aaKnown RBP24.5■■□□□ 1.51
SMARCD2-201ENST00000225742 TDP2O95551 362 aa24.5■■□□□ 1.51
SMARCD2-201ENST00000225742 NPR1P16066 1061 aa24.5■■□□□ 1.51
SMARCD2-201ENST00000225742 MCM6Q14566 821 aa24.5■■□□□ 1.51
SMARCD2-201ENST00000225742 CERS5Q8N5B7 392 aa24.5■■□□□ 1.51
SMARCD2-201ENST00000225742 EPC1Q9H2F5 836 aa24.5■■□□□ 1.51
SMARCD2-201ENST00000225742 RASSF10A6NK89 507 aa24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 RIMBP2O15034 1052 aa24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 ZBTB5O15062 677 aa24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 ERLIN1O75477 346 aa24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 SEC31AO94979 1220 aaKnown RBP24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 HERVK_113P62684 666 aa24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 ZNF771Q7L3S4 317 aaPredicted RBP24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 PUF60Q9UHX1 559 aaKnown RBP24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 NRXN2Q9P2S2 1712 aa24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 KRT86O43790 486 aa24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 HNRNPH3P31942 346 aaKnown RBP24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 TNNI2P48788 182 aa24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 MSL3Q8N5Y2 521 aaKnown RBP24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 SNX29Q8TEQ0 813 aa24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 TEKT1Q969V4 418 aa24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 ANKZF1Q9H8Y5 726 aa24.49■■□□□ 1.51
SMARCD2-201ENST00000225742 ALDH1B1P30837 517 aa24.48■■□□□ 1.51
SMARCD2-201ENST00000225742 MAN2A1Q16706 1144 aa24.48■■□□□ 1.51
SMARCD2-201ENST00000225742 VWA3BQ502W6 1294 aa24.48■■□□□ 1.51
SMARCD2-201ENST00000225742 CDC42EP5Q6NZY7 148 aa24.48■■□□□ 1.51
SMARCD2-201ENST00000225742 KIAA1328Q86T90 577 aa24.48■■□□□ 1.51
SMARCD2-201ENST00000225742 PCMTD1Q96MG8 357 aaPredicted RBP24.48■■□□□ 1.51
SMARCD2-201ENST00000225742 MRIQ9BWK5 157 aa24.48■■□□□ 1.51
SMARCD2-201ENST00000225742 GBP3Q9H0R5 595 aa24.48■■□□□ 1.51
SMARCD2-201ENST00000225742 SLC39A2Q9NP94 309 aa24.48■■□□□ 1.51
SMARCD2-201ENST00000225742 GUCA1BQ9UMX6 200 aa24.48■■□□□ 1.51
SMARCD2-201ENST00000225742 MYH4Q9Y623 1939 aa24.48■■□□□ 1.51
SMARCD2-201ENST00000225742 KDM3AQ9Y4C1 1321 aa24.48■■□□□ 1.51
SMARCD2-201ENST00000225742 ABL1P00519 1130 aa24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 EHHADHQ08426 723 aa24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 HYIQ5T013 277 aa24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 CCDC122Q5T0U0 273 aa24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 TRAPPC11Q7Z392 1133 aa24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 CCDC84Q86UT8 332 aaPredicted RBP24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 PROM2Q8N271 834 aa24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 TSG101Q99816 390 aa24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 TSGA10Q9BZW7 698 aa24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 NHEJ1Q9H9Q4 299 aaPredicted RBP24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 DDX25Q9UHL0 483 aaKnown RBP24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 ARHGAP27Q6ZUM4 889 aa24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 JAKMIP2Q96AA8 810 aa24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 FUT8Q9BYC5 575 aa24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 EDEM3Q9BZQ6 932 aa24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 TMX4Q9H1E5 349 aaPredicted RBP24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 AGPAT5Q9NUQ2 364 aa24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 ATF5Q9Y2D1 282 aaPredicted RBP24.47■■□□□ 1.51
SMARCD2-201ENST00000225742 F8W031 263 aaPredicted RBP24.46■■□□□ 1.51
SMARCD2-201ENST00000225742 PPP1R11O60927 126 aaPredicted RBP24.46■■□□□ 1.51
SMARCD2-201ENST00000225742 LONRF2Q1L5Z9 754 aa24.46■■□□□ 1.51
SMARCD2-201ENST00000225742 CCDC96Q2M329 555 aa24.46■■□□□ 1.51
SMARCD2-201ENST00000225742 PAPD7Q5XG87 772 aaKnown RBP24.46■■□□□ 1.51
SMARCD2-201ENST00000225742 MCTP2Q6DN12 878 aa24.46■■□□□ 1.51
SMARCD2-201ENST00000225742 NLGN1Q8N2Q7 840 aa24.46■■□□□ 1.51
SMARCD2-201ENST00000225742 DCAF4Q8WV16 495 aa24.46■■□□□ 1.51
SMARCD2-201ENST00000225742 RPGRIP1Q96KN7 1286 aa24.46■■□□□ 1.51
SMARCD2-201ENST00000225742 NT5C3AQ9H0P0 336 aa24.46■■□□□ 1.51
SMARCD2-201ENST00000225742 ZSWIM4Q9H7M6 989 aa24.46■■□□□ 1.51
SMARCD2-201ENST00000225742 PSTPIP2Q9H939 334 aa24.46■■□□□ 1.51
SMARCD2-201ENST00000225742 EIF6P56537 245 aaKnown RBP24.45■■□□□ 1.5
SMARCD2-201ENST00000225742 MKL1Q969V6 931 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms