RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 GTPBP6O43824 516 aaPredicted RBP12.09□□□□□ -0.47
KNOP1-201ENST00000219837 ACTN1P12814 892 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 IQCB1Q15051 598 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 MIGA2Q7L4E1 593 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 CPSF3Q9UKF6 684 aaKnown RBP12.09□□□□□ -0.47
KNOP1-201ENST00000219837 FIS1Q9Y3D6 152 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 PCCAP05165 728 aaPredicted RBP12.09□□□□□ -0.47
KNOP1-201ENST00000219837 STAT2P52630 851 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
KNOP1-201ENST00000219837 SUPT20HL1Q3ZLR7 823 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 BAG5Q9UL15 447 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 MEIS1O00470 390 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 INPP1P49441 399 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 RASSF2P50749 326 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 OSTNP61366 133 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 PTK2Q05397 1052 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 DBN1Q16643 649 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 SYDE2Q5VT97 1194 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 RSRC2Q7L4I2 434 aaKnown RBP12.08□□□□□ -0.48
KNOP1-201ENST00000219837 MCUQ8NE86 351 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 TSC1Q92574 1164 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 GJA10Q969M2 543 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 ZNF215Q9UL58 517 aaPredicted RBP12.08□□□□□ -0.48
KNOP1-201ENST00000219837 KIF24Q5T7B8 1368 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 MESDQ14696 234 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 EXOC3L4Q17RC7 722 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 CCDC93Q567U6 631 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 TTC30BQ8N4P2 665 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 KCTD6Q8NC69 237 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 ATP6V1E2Q96A05 226 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 CNOT6LQ96LI5 555 aaKnown RBP12.08□□□□□ -0.48
KNOP1-201ENST00000219837 INO80B-WBP1J3KQ70 363 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 GSTA4O15217 222 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 NVLO15381 856 aaKnown RBP12.08□□□□□ -0.48
KNOP1-201ENST00000219837 RASSF7Q02833 373 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 WHAMMP3Q1A5X7 153 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 SDCCAG3Q96C92 435 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 INO80BQ9C086 356 aaPredicted RBP12.08□□□□□ -0.48
KNOP1-201ENST00000219837 LMCD1Q9NZU5 365 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 SERPINB2P05120 415 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 PSMC2P35998 433 aaKnown RBP12.08□□□□□ -0.48
KNOP1-201ENST00000219837 CCNYQ8ND76 341 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 SPDL1Q96EA4 605 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 PALD1Q9ULE6 856 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 MYOM2P54296 1465 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 POC1B-GALNT4F8VUJ3 575 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 MED7O43513 233 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 PFKFB2O60825 505 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 RFC1P35251 1148 aaPredicted RBP12.08□□□□□ -0.48
KNOP1-201ENST00000219837 ARHGAP25P42331 645 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 DYNLT1P63172 113 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 MAP3K21Q5TCX8 1036 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 NAA35Q5VZE5 725 aa12.08□□□□□ -0.48
KNOP1-201ENST00000219837 A6NNZ2 444 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 SERPINB6P35237 376 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 TUBB8Q3ZCM7 444 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 MYSM1Q5VVJ2 828 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 MYLK4Q86YV6 388 aaPredicted RBP12.07□□□□□ -0.48
KNOP1-201ENST00000219837 NLGN1Q8N2Q7 840 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 ATP6V0A1Q93050 837 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 TESK2Q96S53 571 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 ADD3Q9UEY8 706 aaKnown RBP12.07□□□□□ -0.48
KNOP1-201ENST00000219837 LEMD3Q9Y2U8 911 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 SAMD9Q5K651 1589 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 LOC102724428A0A0B4J2F2 783 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 EIF3CLB5ME19 914 aaKnown RBP12.07□□□□□ -0.48
KNOP1-201ENST00000219837 OPHN1O60890 802 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 RAD17O75943 681 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 PHKA1P46020 1223 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 SIK1P57059 783 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 PTGDRQ13258 359 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 MTERF2Q49AM1 385 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 DALRD3Q5D0E6 543 aaKnown RBP12.07□□□□□ -0.48
KNOP1-201ENST00000219837 HP1BP3Q5SSJ5 553 aaPredicted RBP12.07□□□□□ -0.48
KNOP1-201ENST00000219837 MICAL1Q8TDZ2 1067 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 RUNDC3BQ96NL0 473 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 NT5C1BQ96P26 610 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 EIF3CQ99613 913 aaKnown RBP12.07□□□□□ -0.48
KNOP1-201ENST00000219837 TPCN1Q9ULQ1 816 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 FNDC3AQ9Y2H6 1198 aaKnown RBP12.07□□□□□ -0.48
KNOP1-201ENST00000219837 FMNL1O95466 1100 aaPredicted RBP12.07□□□□□ -0.48
KNOP1-201ENST00000219837 KRT1P04264 644 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 IREB2P48200 963 aaKnown RBP12.07□□□□□ -0.48
KNOP1-201ENST00000219837 THOC5Q13769 683 aaKnown RBP12.07□□□□□ -0.48
KNOP1-201ENST00000219837 ALKBH8Q96BT7 664 aaKnown RBP12.07□□□□□ -0.48
KNOP1-201ENST00000219837 KLHL14Q9P2G3 628 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 CLIC2O15247 247 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 MAPK4P31152 587 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 IRX4P78413 519 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 ZNF827Q17R98 1081 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 TRIM68Q6AZZ1 485 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 SCARA5Q6ZMJ2 495 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 EXOC8Q8IYI6 725 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 BBOF1Q8ND07 529 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 METTL14Q9HCE5 456 aaKnown RBP12.07□□□□□ -0.48
KNOP1-201ENST00000219837 PASKQ96RG2 1323 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 NDUFA8P51970 172 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 MAP7D3Q8IWC1 876 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 AMNQ9BXJ7 453 aa12.07□□□□□ -0.48
KNOP1-201ENST00000219837 CPP00450 1065 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 217.9 ms