RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 TNS2Q63HR2 1409 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 AKR1B1P15121 316 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 KIAA0753Q2KHM9 967 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 CCDC174Q6PII3 467 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 OGFOD1Q8N543 542 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 FAM76AQ8TAV0 307 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 SUGCTQ9HAC7 445 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 CEP104O60308 925 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 MYL1P05976 194 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 UBXN2AP68543 259 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 FKBP3Q00688 224 aaKnown RBP10.79□□□□□ -0.68
CSTF1-201ENST00000217109 SETQ01105 290 aaPredicted RBP10.79□□□□□ -0.68
CSTF1-201ENST00000217109 ICA1Q05084 483 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 CASP8Q14790 479 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 MAN2A1Q16706 1144 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 TTBK2Q6IQ55 1244 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 MYCT1Q8N699 235 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 NEDD1Q8NHV4 660 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 MAGEF1Q9HAY2 307 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 GOLGA6CA6NDK9 693 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 TMEM110-MUSTN1A8MSY1 372 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 STXBP3O00186 592 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 GOLGA6DP0CG33 693 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 RPL13P26373 211 aaKnown RBP10.79□□□□□ -0.68
CSTF1-201ENST00000217109 SLC7A5Q01650 507 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 EHHADHQ08426 723 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 CETN1Q12798 172 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 CFAP58Q5T655 872 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 GSPT2Q8IYD1 628 aaKnown RBP10.79□□□□□ -0.68
CSTF1-201ENST00000217109 GOLGA6AQ9NYA3 693 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 MRC1P22897 1456 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 LMO7Q8WWI1 1683 aa10.79□□□□□ -0.68
CSTF1-201ENST00000217109 USP17L10C9JJH3 530 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 PPEF1O14829 653 aaPredicted RBP10.78□□□□□ -0.68
CSTF1-201ENST00000217109 EPB41P11171 864 aaKnown RBP10.78□□□□□ -0.68
CSTF1-201ENST00000217109 GUCY2FP51841 1108 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 KIF11P52732 1056 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 VSNL1P62760 191 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 IFI16Q16666 785 aaKnown RBP10.78□□□□□ -0.68
CSTF1-201ENST00000217109 RBM26Q5T8P6 1007 aaKnown RBP10.78□□□□□ -0.68
CSTF1-201ENST00000217109 RETREG2Q8NC44 543 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 SELENOOQ9BVL4 669 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 TRIM31Q9BZY9 425 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 IL17RBQ9NRM6 502 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 ARMCX3Q9UH62 379 aaPredicted RBP10.78□□□□□ -0.68
CSTF1-201ENST00000217109 MAD2L2Q9UI95 211 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 KDM3BQ7LBC6 1761 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 ATP1A1P05023 1023 aaKnown RBP10.78□□□□□ -0.68
CSTF1-201ENST00000217109 ERVK-24P63145 666 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 VWA3BQ502W6 1294 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 RNF187Q5TA31 235 aaPredicted RBP10.78□□□□□ -0.68
CSTF1-201ENST00000217109 STXBP4Q6ZWJ1 553 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 ELOA2Q8IYF1 753 aaPredicted RBP10.78□□□□□ -0.68
CSTF1-201ENST00000217109 MXD3Q9BW11 206 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 CCSER1Q9C0I3 900 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 ADAM21Q9UKJ8 722 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 CHD2O14647 1828 aaKnown RBP10.78□□□□□ -0.68
CSTF1-201ENST00000217109 AFDNP55196 1824 aaKnown RBP10.78□□□□□ -0.68
CSTF1-201ENST00000217109 E9PMD0 336 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 ATP8B1O43520 1251 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 IVLP07476 585 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 NR2F2P24468 414 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 CFAP221Q4G0U5 840 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 MLXIPQ9HAP2 919 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 STK17AQ9UEE5 414 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 FAM237AA0A1B0GTK4 181 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 OPA1O60313 960 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 FTCDO95954 541 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 SP4Q02446 784 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 GPATCH4Q5T3I0 446 aaKnown RBP10.78□□□□□ -0.68
CSTF1-201ENST00000217109 NT5DC1Q5TFE4 455 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 TBC1D5Q92609 795 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 ADAMTS1Q9UHI8 967 aa10.78□□□□□ -0.68
CSTF1-201ENST00000217109 SPATA31A5Q5VU36 1347 aa10.77□□□□□ -0.68
CSTF1-201ENST00000217109 SPATA31A7Q8IWB4 1347 aa10.77□□□□□ -0.68
CSTF1-201ENST00000217109 H2AFXP16104 143 aaPredicted RBP10.77□□□□□ -0.68
CSTF1-201ENST00000217109 PMS1P54277 932 aaKnown RBP10.77□□□□□ -0.68
CSTF1-201ENST00000217109 PDXDC2PQ6P474 469 aa10.77□□□□□ -0.68
CSTF1-201ENST00000217109 CPXCR1Q8N123 301 aa10.77□□□□□ -0.68
CSTF1-201ENST00000217109 KIFC2Q96AC6 838 aa10.77□□□□□ -0.68
CSTF1-201ENST00000217109 FAM204AQ9H8W3 233 aa10.77□□□□□ -0.68
CSTF1-201ENST00000217109 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.77□□□□□ -0.68
CSTF1-201ENST00000217109 HYOU1Q9Y4L1 999 aa10.77□□□□□ -0.68
CSTF1-201ENST00000217109 PCDHA13Q9Y5I0 950 aa10.77□□□□□ -0.68
CSTF1-201ENST00000217109 FLT1P17948 1338 aa10.77□□□□□ -0.69
CSTF1-201ENST00000217109 PNMA6FA0A0J9YX94 578 aa10.77□□□□□ -0.69
CSTF1-201ENST00000217109 ZNF185O15231 689 aa10.77□□□□□ -0.69
CSTF1-201ENST00000217109 XRCC5P13010 732 aaKnown RBP10.77□□□□□ -0.69
CSTF1-201ENST00000217109 KRT13P13646 458 aa10.77□□□□□ -0.69
CSTF1-201ENST00000217109 HOXA13P31271 388 aaPredicted RBP10.77□□□□□ -0.69
CSTF1-201ENST00000217109 HPDP32754 393 aaPredicted RBP10.77□□□□□ -0.69
CSTF1-201ENST00000217109 HNRNPH2P55795 449 aaKnown RBP10.77□□□□□ -0.69
CSTF1-201ENST00000217109 GRIK5Q16478 980 aa10.77□□□□□ -0.69
CSTF1-201ENST00000217109 CDKAL1Q5VV42 579 aa10.77□□□□□ -0.69
CSTF1-201ENST00000217109 FBXO11Q86XK2 927 aa10.77□□□□□ -0.69
CSTF1-201ENST00000217109 CCDC170Q8IYT3 715 aa10.77□□□□□ -0.69
CSTF1-201ENST00000217109 FAM133AQ8N9E0 248 aa10.77□□□□□ -0.69
CSTF1-201ENST00000217109 NOA1Q8NC60 698 aaKnown RBP10.77□□□□□ -0.69
CSTF1-201ENST00000217109 NAP1L4Q99733 375 aaKnown RBP10.77□□□□□ -0.69
CSTF1-201ENST00000217109 HSD3B7Q9H2F3 369 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms