RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 USP17L1Q7RTZ2 530 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 MMGT1Q8N4V1 131 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 ALS2CR12Q96Q35 445 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 SH2D4AQ9H788 454 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 STX8Q9UNK0 236 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 SAMM50Q9Y512 469 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 ZPR1O75312 459 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 MYL1P05976 194 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 KCTD16Q68DU8 428 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 TSEN2Q8NCE0 465 aaKnown RBP11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 ARL8AQ96BM9 186 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 MKNK2Q9HBH9 465 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 HYOU1Q9Y4L1 999 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 ANKRD36CQ5JPF3 1778 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 A0A087WUV0 522 aaPredicted RBP11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 SHTN1A0MZ66 631 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 TOM1O60784 492 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 MAP2K2P36507 400 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 PPP2R5AQ15172 486 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 DYMQ7RTS9 669 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 ERGIC2Q96RQ1 377 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 IL17RBQ9NRM6 502 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 MINPP1Q9UNW1 487 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 PLCH1Q4KWH8 1693 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 OPA1O60313 960 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 HSF2BPO75031 334 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 OR52Z1P0C646 297 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 ATP1A2P50993 1020 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 RASSF7Q02833 373 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 ERFEQ4G0M1 354 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 TDRD12Q587J7 1177 aaKnown RBP11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 MS4A14Q96JA4 679 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 TANGO6Q9C0B7 1094 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 SEMA6BQ9H3T3 888 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 SH3GLB2Q9NR46 395 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 ATP8A2Q9NTI2 1148 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 ARPP21Q9UBL0 812 aaPredicted RBP11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 PLAGL2Q9UPG8 496 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 FAM169AQ9Y6X4 670 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 LRRC53A6NM62 1247 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 CYTH3O43739 400 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 SHOX2O60902 331 aaPredicted RBP11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 NAPAP54920 295 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 VWA3BQ502W6 1294 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 C8orf74Q6P047 294 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 SH2D3CQ8N5H7 860 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 KIAA0895Q8NCT3 520 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 CELF1Q92879 486 aaKnown RBP11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 NDST4Q9H3R1 872 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 VAT1LQ9HCJ6 419 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 STIM2Q9P246 746 aa11.66□□□□□ -0.54
CX3CL1-201ENST00000006053 GOLGA8KD6RF30 607 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 TCP1P17987 556 aaKnown RBP11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 GFPT1Q06210 699 aaPredicted RBP11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 PDCLQ13371 301 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 SLC35G1Q2M3R5 365 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 CNNM4Q6P4Q7 775 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 CACNA2D4Q7Z3S7 1137 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 TMC4Q7Z404 712 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 IFT81Q8WYA0 676 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 MAD2L2Q9UI95 211 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 MYH10P35580 1976 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 ESYT3A0FGR9 886 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 M0R2N6 131 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 ERLIN2O94905 339 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 TSPY3P0CV98 308 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 TSPY8P0CW00 308 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 TXKP42681 527 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 EPHB4P54760 987 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 RNASE9P60153 205 aaKnown RBP11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 AMPD3Q01432 767 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 LRCH2Q5VUJ6 765 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 HAUS3Q68CZ6 603 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 SLC44A5Q8NCS7 719 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 NLRC4Q9NPP4 1024 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 RBM12Q9NTZ6 932 aaKnown RBP11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 SALL4Q9UJQ4 1053 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 FLT1P17948 1338 aa11.65□□□□□ -0.54
CX3CL1-201ENST00000006053 A0A1W2PQJ5 194 aa11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 STXBP3O00186 592 aa11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 EIF3HO15372 352 aaKnown RBP eCLIP11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 ZEB2O60315 1214 aa11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 GNAQP50148 359 aa11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 CDK17Q00537 523 aa11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 PPARDQ03181 441 aa11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 SEMA3FQ13275 785 aa11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 ENOX2Q16206 610 aaKnown RBP11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 DZIP1Q86YF9 867 aaKnown RBP11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 ZSCAN29Q8IWY8 852 aaPredicted RBP11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 CCDC155Q8N6L0 562 aa11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 CALML4Q96GE6 196 aa11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 SGSM3Q96HU1 749 aa11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 C7orf25Q9BPX7 421 aa11.65□□□□□ -0.55
CX3CL1-201ENST00000006053 MAP2K1Q02750 393 aaPredicted RBP11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 GRM4Q14833 912 aa11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 TTMPQ5BVD1 217 aa11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 FIGNQ5HY92 759 aa11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 FAM107BQ9H098 131 aa11.64□□□□□ -0.55
CX3CL1-201ENST00000006053 CUEDC2Q9H467 287 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms