RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Map3k15A2AQW0 1331 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Gm7168A0AUV4 508 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 H2afzP0C0S6 128 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Atp6v0a2P15920 856 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 NfixP70257 488 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Nhej1Q3KNJ2 295 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 H2afvQ3THW5 128 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Nsrp1Q5NCR9 542 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Haus4Q8BFT2 363 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Znf830Q8R1N0 363 aaKnown RBP10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Defb15Q8R2I5 79 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ivns1abpQ920Q8 642 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Mtmr7Q9Z2C9 660 aa10.37□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Spef2Q8C9J3 1734 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Zfp597E9Q6S0 419 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Capn2O08529 700 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Aak1Q3UHJ0 959 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Carmil2Q3V3V9 1296 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Naa35Q6PHQ8 725 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 AsphQ8BSY0 741 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Epc1Q8C9X6 813 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Zfp408H7BX78 710 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Sparcl1P70663 650 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Sumf1Q8R0F3 372 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tmem134Q8R0J4 195 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Acot11Q8VHQ9 594 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Srgap2Q91Z67 1071 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Cd2apQ9JLQ0 637 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Mkrn1Q9QXP6 481 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Qrich1Q3UA37 777 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Rc3h1Q4VGL6 1130 aaKnown RBP10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Dync1li2Q6PDL0 492 aaKnown RBP10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ankrd24Q80VM7 985 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Micall1Q8BGT6 870 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tbx22Q8K402 517 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Nup58Q8R332 587 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Sertad1Q9JL10 236 aa10.36□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Gm11549A0A286YD83 63 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Surf1P09925 306 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Mettl14Q3UIK4 456 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Dpf2Q61103 391 aaKnown RBP10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Pabpc4Q6PHQ9 660 aaKnown RBP10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Vps52Q8C754 723 aaKnown RBP10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Calcoco1Q8CGU1 691 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Plcg2Q8CIH5 1265 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 OscarQ8VBT3 265 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Mcur1Q9CXD6 340 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ebag9Q9D0V7 213 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Fsip1Q9D3V5 435 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Pik3caP42337 1068 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Dact3Q0PHV7 610 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ripply1Q2WG77 201 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Xxylt1Q3U4G3 392 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Slc9a2Q3ZAS0 814 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Spata16Q8C636 571 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Efcab8Q8C9R9 203 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tgs1Q923W1 853 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Nrxn3Q6P9K9 1571 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tex13c2A0A0G2JGA3 530 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Foxn3Q499D0 457 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Slc51bQ80WK2 128 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Slitrk3Q810B9 980 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 SowahdQ8BY98 327 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Zc3h6Q8BYK8 1177 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Kcnv2Q8CFS6 562 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Erp44Q9D1Q6 406 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 CsadQ9DBE0 493 aa10.35□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Gm6121L7MUF1 212 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Gfpt1P47856 697 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Gad1P48318 593 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Snai1Q02085 264 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Gpr162Q3UN16 588 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Fgd5Q80UZ0 1219 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Q8CEZ4 452 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tpcn1Q9EQJ0 817 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Dpf1Q9QX66 387 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Prdm2A2A7B5 1709 aaKnown RBP10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Pgrmc1O55022 195 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Xrcc6P23475 608 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ftl1P29391 183 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 LtbrP50284 415 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Chp1P61022 195 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ccdc51Q3URS9 406 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Pnma5Q5DTT8 618 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 HarsQ61035 509 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 GartQ64737 1010 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Ctnna3Q65CL1 895 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 PrimpolQ6P1E7 537 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 IarsQ8BU30 1262 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Rsad2Q8CBB9 362 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Tc2nQ91XT6 489 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Prpf6Q91YR7 941 aaKnown RBP10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Usp11Q99K46 921 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Mageb2A2AHM0 380 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Kif23E9Q5G3 953 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Mdh1P14152 334 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Slc12a2P55012 1205 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Myo19Q5SV80 963 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Gdap1l1Q8VE33 370 aa10.34□□□□□ -0.75
Ldlr-202ENSMUST00000213114 Synpo2Q91YE8 1087 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms