RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Tmx2Q9D710 295 aaKnown RBP23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Bub1bQ9Z1S0 1052 aa23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Ccnd3P30282 292 aa23.86■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 LtbrP50284 415 aa23.86■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Brd9Q3UQU0 596 aaKnown RBP23.86■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Siglec10Q80ZE3 688 aa23.86■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Senp7Q8BUH8 1037 aa23.86■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Gprc5cQ8K3J9 440 aa23.86■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Acat1Q8QZT1 424 aa23.86■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Ifih1Q8R5F7 1025 aa23.86■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Saal1Q9D2C2 474 aa23.86■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Fsip1Q9D3V5 435 aa23.86■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Fem1bQ9Z2G0 627 aa23.86■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Plcg1Q62077 1302 aa23.85■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Prr14lE9Q7C4 1971 aa23.85■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Vmn2r71L7N2D8 855 aa23.85■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Pcif1P59114 706 aa23.85■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Pgrmc2Q80UU9 217 aaKnown RBP23.85■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Arhgef19Q8BWA8 802 aa23.85■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Kri1Q8VDQ9 704 aaKnown RBP23.85■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Kdm4bQ91VY5 1086 aa23.85■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Tubgcp2Q921G8 905 aa23.85■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Tfr2Q9JKX3 798 aa23.85■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Vav3Q9R0C8 847 aa23.85■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Krt18P05784 423 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Recql4Q75NR7 1216 aaKnown RBP23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Zdhhc14Q8BQQ1 489 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Fermt2Q8CIB5 680 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 PpatQ8CIH9 517 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 HlcsQ920N2 722 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Ttc6G3UYY4 1857 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Ccdc88cQ6VGS5 2009 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 CluhQ5SW19 1315 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Fyb2A2A995 729 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Akr1c19G3X9Y6 323 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Lamp1P11438 406 aaKnown RBP23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Sdc2P43407 202 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 NfibP97863 570 aaKnown RBP23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Pnma5Q5DTT8 618 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 BcrQ6PAJ1 1270 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Yars2Q8BYL4 472 aaKnown RBP23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Q8BZJ8 459 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Q91WD4 421 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Ankrd1Q9CR42 319 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 BccipQ9CWI3 316 aa23.84■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Mroh8E9PYI4 1049 aa23.83■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Irf5P56477 497 aa23.83■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Nlrp2Q4PLS0 1046 aaKnown RBP23.83■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Rnf181Q9CY62 165 aa23.83■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Ngly1Q9JI78 651 aa23.83■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Lypla2Q9WTL7 231 aa23.83■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Atp12aQ9Z1W8 1035 aa23.83■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Rfpl4bJ3QPR6 266 aa23.82■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Esr2O08537 530 aa23.82■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Serpinb13Q8CDC0 389 aa23.82■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Stard7Q8R1R3 373 aa23.82■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Mov10l1Q99MV5 1187 aa23.82■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Alpk1Q9CXB8 1231 aa23.82■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Hmgn5Q9JL35 406 aa23.82■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Slc26a4Q9R155 780 aa23.82■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Parp2O88554 559 aa23.81■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Cfap157Q0VFX2 523 aa23.81■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Trmt1Q3TX08 663 aa23.81■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 NapaQ9DB05 295 aa23.81■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Map3k20Q9ESL4 802 aaKnown RBP23.81■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Zscan25B2RX31 543 aa23.81■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Hoxc10P31257 342 aa23.81■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Dhx40Q6PE54 779 aaKnown RBP23.81■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Caps2Q8BUG5 550 aa23.81■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Lmbrd1Q8K0B2 537 aa23.81■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Filip1Q9CS72 1211 aa23.81■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Pabpc6Q9D4E6 643 aaKnown RBP23.81■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Zbtb12Q9Z150 459 aa23.81■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 NefhP19246 1090 aa23.8■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Kif5bQ61768 963 aa23.8■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Supt20hQ7TT00 530 aaKnown RBP23.8■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Nap1l5Q9JJF0 156 aa23.8■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Gm42688A0A0R3P9D1 673 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Rsph10bE9PYQ0 876 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 B020004C17RikJ3QP07 232 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Kansl1lQ5DTI6 991 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Foxn1Q61575 648 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Ccdc122Q8BVN0 290 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Ccdc142Q8CAI1 738 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Mkrn1Q9QXP6 481 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Dctpp1Q9QY93 170 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Olfm4Q3UZZ4 505 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Lrrc36Q3V0M2 755 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Aggf1Q7TN31 711 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Kcnv2Q8CFS6 562 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Krt79Q8VED5 531 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Bco2Q99NF1 532 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Baiap2l1Q9DBJ3 514 aa23.79■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Msh3P13705 1091 aa23.78■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Cst8P32766 142 aa23.78■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Adcy5P84309 1262 aa23.78■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Pla2g6P97819 807 aa23.78■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Lrrfip1Q3UZ39 729 aaKnown RBP23.78■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 P2ry10Q8BFU7 328 aa23.78■■□□□ 1.4
Ccdc88a-202ENSMUST00000109477 Tsen34Q8BMZ5 316 aa23.78■■□□□ 1.4
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms