RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Rab20P35295 233 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Nek9Q8K1R7 984 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Nrbp2Q91V36 499 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Erp44Q9D1Q6 406 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Nck2O55033 380 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Mum1l1Q4VA55 681 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Cap2Q9CYT6 476 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Tcof1O08784 1320 aaKnown RBP13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 DffaO54786 331 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Zbtb40Q6PCS8 1258 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Ddx19bQ8BZY3 494 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Cd209bQ8CJ91 325 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Ube3bQ9ES34 1070 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Shroom2A2ALU4 1481 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 DnttP09838 530 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Acap3Q6NXL5 833 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Polr2bQ8CFI7 1174 aaKnown RBP13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Rwdd2aQ9D9S3 292 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Ttll7A4Q9F0 912 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Apol6B7ZC55 329 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Dync1li2Q6PDL0 492 aaKnown RBP13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Lyve1Q8BHC0 318 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Csgalnact2Q8C1F4 542 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 MlklQ9D2Y4 472 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 XlrP05531 208 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Sycp3P70281 254 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Dab2P98078 766 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Itih3Q61704 889 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Efcab8Q8C9R9 203 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Plekha4Q8VC98 588 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 CsadQ9DBE0 493 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Rilpl1Q9JJC6 406 aa13.67□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Ppfia4B8QI36 1187 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Lmnb2P21619 596 aaKnown RBP13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 NfkbibQ60778 359 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 FliiQ9JJ28 1271 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Pacsin2Q9WVE8 486 aaKnown RBP13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Cfap70D3YVL2 1141 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Nr1d1Q3UV55 615 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Q8C6G1 249 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Arl8aQ8VEH3 186 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 GdaQ9R111 454 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Samd9lQ69Z37 1561 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Myl1P05977 188 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 OtulinQ3UCV8 352 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Cep70Q6IQY5 616 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Asap2Q7SIG6 958 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Kcnv2Q8CFS6 562 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Slc13a1Q9JHI4 594 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Orc1Q9Z1N2 840 aaKnown RBP13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Talpid3E9PV87 1520 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Zrsr1Q64707 428 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Ehd2Q8BH64 543 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Gnl3Q8CI11 538 aaKnown RBP13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Q8R1Y2 203 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Fgd4Q91ZT5 766 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Mtmr2Q9Z2D1 643 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Clrn2B2RVW2 232 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Zfp94E9Q6Y4 486 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Lrrc23O35125 340 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Pde4aO89084 844 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 HdxQ14B70 692 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Usp28Q5I043 1051 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 HnrnpcQ9Z204 313 aaKnown RBP13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Hdac6Q9Z2V5 1149 aa13.66□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Dnaaf5B9EJR8 853 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Rad51bO35719 350 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Sdf4Q61112 361 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Snx19Q6P4T1 997 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Arhgef12Q8R4H2 1543 aaKnown RBP13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Dynll2Q9D0M5 89 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Abt1Q9QYL7 269 aaKnown RBP13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Gli2Q0VGT2 1544 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Nova2D3YVV7 556 aaKnown RBP13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Pcdhb9E9Q5G2 828 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Fam167bP17257 162 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 VdrP48281 422 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Tcp11Q01755 566 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Nlrp4cQ3TKR3 982 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Gm14685Q52KH6 695 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Trim35Q8C006 501 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Abcc2Q8VI47 1543 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Ctnnd1P30999 938 aaKnown RBP13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Ttc27Q8CD92 847 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Cd248Q91V98 765 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Pcsk1nQ9QXV0 258 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Gna14P30677 355 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Stmn1P54227 149 aaKnown RBP13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Ppp2r5eQ61151 467 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Ccdc92Q8VDN4 314 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Eif4a3Q91VC3 411 aaKnown RBP13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Slc12a7Q9WVL3 1083 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Slc3a2P10852 526 aaKnown RBP13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Cd22P35329 862 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Chl1P70232 1209 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Ext2P70428 718 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Ncoa7Q6DFV7 943 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Q6PD19 689 aa13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Arid5bQ8BM75 1188 aaKnown RBP13.65□□□□□ -0.22
Ccdc88c-201ENSMUST00000068411 Vmn1r213Q8R278 384 aa13.65□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 59.1 ms