RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ttc8Q8VD72 515 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Atp1a1Q8VDN2 1023 aaKnown RBP13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gpr161B2RPY5 545 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Cep126Q0VBV7 1103 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Rasa3Q60790 834 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Fam204aQ8C6C7 236 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 YarsQ91WQ3 528 aaKnown RBP13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gm3409A0A0G2JE67 319 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Lrrc74aA0A1Y7VMD6 494 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Prss40A6H6T1 365 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Mroh9G5E8L9 891 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Hace1Q3U0D9 909 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ttbk2Q3UVR3 1243 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Clec16aQ80U30 1036 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 6820408C15RikQ8BJX2 354 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Syne4Q8CII8 388 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Mtmr4Q91XS1 1190 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Tsnaxip1Q99P25 704 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Zfyve19Q9DAZ9 389 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ddx23D3Z0M9 819 aaKnown RBP13.02□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Apol11aE9PZG0 334 aa13.02□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Lmtk3Q5XJV6 1424 aa13.02□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ms4a5Q810P8 197 aa13.02□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Znrd1-asQ8R0E5 213 aa13.02□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Arl6ip4Q9JM93 229 aa13.02□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Nfe2l3Q9WTM4 660 aa13.02□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Caprin2Q05A80 1031 aaKnown RBP13.02□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Prr7Q3V0I2 269 aa13.02□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Csgalnact2Q8C1F4 542 aa13.02□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Rsad2Q8CBB9 362 aa13.02□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Psmd2Q8VDM4 908 aa13.02□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Tpcn1Q9EQJ0 817 aa13.02□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ubn2Q80WC1 1314 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 4932429P05RikA2ADI4 785 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Rps6ka1P18653 724 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ano9P86044 747 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Sval3Q76I99 144 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Bola2Q8BGS2 86 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 CactinQ9CS00 772 aaKnown RBP13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Dph5Q9CWQ0 281 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Dusp10Q9ESS0 483 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Add3Q9QYB5 706 aaKnown RBP13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Bnip3lQ9Z2F7 218 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Plcg1Q62077 1302 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Speer2E9Q9U2 264 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Zc3h7bF8VPP8 982 aaKnown RBP13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ubn1Q4G0F8 1135 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Rc3h1Q4VGL6 1130 aaKnown RBP13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ccdc85aQ5SP85 500 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Cep85Q8BMK0 761 aa13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Tcof1O08784 1320 aaKnown RBP13.02□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Brpf3B2KF05 1204 aaKnown RBP13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Otud5Q3U2S4 566 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Slc4a7Q8BTY2 1034 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ccdc28aQ8CEI3 192 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Slc44a4Q91VA1 707 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Grpel1Q99LP6 217 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Map7d1A2AJI0 846 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Adam7O35227 789 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 EmbP21995 330 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Lins1Q3U1D0 764 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Cracr2bQ80ZJ8 394 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Anks1bQ8BIZ1 1259 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Trappc12Q8K2L8 797 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 CoasyQ9DBL7 563 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Nup153E9Q3G8 1462 aaKnown RBP13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Myo1fP70248 1099 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Apba2P98084 750 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Fam198bQ3UPI1 517 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ccdc157Q5SPX1 718 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Gys2Q8VCB3 704 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Acad12D3Z7X0 555 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Fam107bQ3TGF2 131 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Pnma5Q5DTT8 618 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Tbx22Q8K402 517 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ppp1r16bQ8VHQ3 568 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Gtpbp4Q99ME9 634 aaKnown RBP13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Lztfl1Q9JHQ5 299 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Atp1a4Q9WV27 1032 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Rab34Q64008 259 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Enox1Q8BHR2 643 aaKnown RBP13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Phf20Q8BLG0 1010 aaKnown RBP13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Klhl7Q8BUL5 586 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Tmem87aQ8BXN9 555 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Acat1Q8QZT1 424 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Sec63Q8VHE0 760 aaKnown RBP13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ssc5dQ8BV57 1371 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Shank2Q80Z38 1476 aa13.01□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Gm5580A0A0N4SVP8 411 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Zfpm1O35615 995 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Magea1O89006 320 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Magea5O89009 320 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Cdh15P33146 784 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Rad23aP54726 363 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ehbp1Q69ZW3 1231 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Ces5aQ6AW46 575 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Als2cr12Q8BVM7 383 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Klhl40Q9D783 621 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Magea2Q9R2A2 320 aa13□□□□□ -0.33
Pcif1-201ENSMUST00000041643 Tulp1Q9Z273 543 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms