RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Pcdhb9E9Q5G2 828 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tspyl1O88852 379 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Wdr70Q3TWF6 657 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Mtrf1lQ8BJU9 373 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Iqcb1Q8BP00 598 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 4930504O13RikQ8C5Z9 145 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Paip2bQ91W45 136 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Setd6Q9CWY3 473 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Galnt15Q9D2N8 638 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Add2Q9QYB8 725 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Dnaaf5B9EJR8 853 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Gad1P48318 593 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Gm14685Q52KH6 695 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Clec4gQ8BNX1 294 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Prpf3Q922U1 683 aaKnown RBP11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 IkbipQ9DBZ1 373 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ndufa13Q9ERS2 144 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Zmynd8A2A484 1235 aaKnown RBP11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Gap43P06837 227 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Rab20P35295 233 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 CrklP47941 303 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cct8l1Q80YT3 562 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Zfp449Q8CB76 518 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 ArpinQ9D0A3 226 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Prmt9Q3U3W5 846 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 GmncQ3URY2 333 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cabcoco1Q8CDT7 208 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ints9Q8K114 658 aaKnown RBP11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cst12Q9DAN8 128 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 FliiQ9JJ28 1271 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Rnf4Q9QZS2 194 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pdcd7Q9WTY1 482 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ulk4Q3V129 1303 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Mmrn2A6H6E2 943 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ddit3P35639 168 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 TrhQ62361 256 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Smg5Q6ZPY2 1017 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Parp10Q8CIE4 960 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Wars2Q9CYK1 360 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Dbn1Q9QXS6 706 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Sh3tc1G3X9F6 1346 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Drp2Q05AA6 957 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Xab2Q9DCD2 855 aaKnown RBP11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Slc40a1Q9JHI9 570 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Gm11983V9GXS8 105 aa11.01□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Syngap1F6SEU4 1340 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 PzpQ61838 1495 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Atp10aO54827 1508 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Zfp212G3X8R7 492 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Slc3a2P10852 526 aaKnown RBP11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Nr2f2P43135 414 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 IvlP48997 467 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 MagohP61327 146 aaKnown RBP11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Arhgap10Q6Y5D8 786 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Olfr118Q7TRJ6 321 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 MagohbQ9CQL1 146 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pdzd9Q9D9M4 266 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Syt2P46097 422 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pald1P70261 859 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 CtcfQ61164 736 aaKnown RBP11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Usp44Q8C2S0 711 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Spata32Q8C5V0 334 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Riox2Q8CD15 465 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Noc2lQ9WV70 747 aaKnown RBP11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Foxo3Q9WVH4 672 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 A0A286YCQ6 122 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Apba1B2RUJ5 842 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Krt78E9Q0F0 1068 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Arhgap30Q640N3 1101 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Golph3lQ8R088 285 aaKnown RBP11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Alpk1Q9CXB8 1231 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cyp2ab1S4R196 498 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Zfp804bA0A0G2JGH6 1343 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Uggt1Q6P5E4 1551 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cd72P21855 354 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Esco1Q69Z69 843 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Dars2Q8BIP0 653 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 QarsQ8BML9 775 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Polr2bQ8CFI7 1174 aaKnown RBP11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Q8R1Y2 203 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Bst2Q8R2Q8 172 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Eif3hQ91WK2 352 aaKnown RBP11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 AacsQ9D2R0 672 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 GsnP13020 780 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 NsfP46460 744 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Slc9a2Q3ZAS0 814 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 HomezQ80W88 542 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Trpa1Q8BLA8 1125 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cdca7Q9D0M2 382 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Dnaaf1Q9D2H9 634 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 VrtnQ3SYK4 740 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Gsdmc4Q3TR54 480 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Q3TTJ4 293 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Kdm7aQ3UWM4 940 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Fsd1lQ8BYN5 507 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Dclre1bQ8C7W7 541 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pex11aQ9Z211 246 aa11□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Nr1i3O35627 358 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cav1P49817 178 aa10.99□□□□□ -0.65
Ubr1-201ENSMUST00000028728 XpcP51612 930 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 2287.5 ms