RNA–Protein interactions for RNA: ENST00000642118.1

CASC19-281, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-281ENST00000642118 HOXB1P14653 301 aaPredicted RBP11.94□□□□□ -0.5
CASC19-281ENST00000642118 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
CASC19-281ENST00000642118 FAM205CA6NFA0 338 aa11.91□□□□□ -0.5
CASC19-281ENST00000642118 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.5
CASC19-281ENST00000642118 HS3ST6Q96QI5 342 aa11.9□□□□□ -0.5
CASC19-281ENST00000642118 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
CASC19-281ENST00000642118 POTEB3A0JP26 581 aa11.89□□□□□ -0.51
CASC19-281ENST00000642118 POTEBQ6S5H4 581 aa11.89□□□□□ -0.51
CASC19-281ENST00000642118 RTN4Q9NQC3 1192 aaKnown RBP11.87□□□□□ -0.51
CASC19-281ENST00000642118 KIF3CO14782 793 aa11.85□□□□□ -0.51
CASC19-281ENST00000642118 CHGAP10645 457 aaKnown RBP11.84□□□□□ -0.51
CASC19-281ENST00000642118 PPP1R37O75864 691 aa11.84□□□□□ -0.51
CASC19-281ENST00000642118 GPR153Q6NV75 609 aa11.84□□□□□ -0.51
CASC19-281ENST00000642118 C2orf72A6NCS6 295 aa11.82□□□□□ -0.52
CASC19-281ENST00000642118 ERBB3P21860 1342 aa11.82□□□□□ -0.52
CASC19-281ENST00000642118 DNAJC5Q9H3Z4 198 aa11.81□□□□□ -0.52
CASC19-281ENST00000642118 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
CASC19-281ENST00000642118 SPNS2Q8IVW8 549 aa11.79□□□□□ -0.52
CASC19-281ENST00000642118 KRTAP3-3Q9BYR6 98 aa11.78□□□□□ -0.52
CASC19-281ENST00000642118 KRTAP3-2Q9BYR7 98 aa11.78□□□□□ -0.52
CASC19-281ENST00000642118 TMC2Q8TDI7 906 aa11.77□□□□□ -0.53
CASC19-281ENST00000642118 ARSIQ5FYB1 569 aa11.76□□□□□ -0.53
CASC19-281ENST00000642118 VARS2Q5ST30 1063 aaKnown RBP11.74□□□□□ -0.53
CASC19-281ENST00000642118 SLC34A2O95436 690 aa11.73□□□□□ -0.53
CASC19-281ENST00000642118 MMRN1Q13201 1228 aa11.73□□□□□ -0.53
CASC19-281ENST00000642118 NKX1-1Q15270 411 aaPredicted RBP11.72□□□□□ -0.53
CASC19-281ENST00000642118 RYDENQ9NUL5 291 aaKnown RBP11.72□□□□□ -0.53
CASC19-281ENST00000642118 ZNF687Q8N1G0 1237 aa11.71□□□□□ -0.54
CASC19-281ENST00000642118 KHSRPQ92945 711 aaKnown RBP eCLIP11.7□□□□□ -0.547e-7■□□□□ 9.8
CASC19-281ENST00000642118 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
CASC19-281ENST00000642118 GPHNQ9NQX3 736 aaPredicted RBP11.67□□□□□ -0.54
CASC19-281ENST00000642118 PCDHGA4Q9Y5G9 962 aa11.66□□□□□ -0.54
CASC19-281ENST00000642118 FOXK1P85037 733 aa11.65□□□□□ -0.54
CASC19-281ENST00000642118 NUDT7P0C024 238 aa11.62□□□□□ -0.55
CASC19-281ENST00000642118 PLPP6Q8IY26 295 aa11.62□□□□□ -0.55
CASC19-281ENST00000642118 ABCC9O60706 1549 aa11.61□□□□□ -0.55
CASC19-281ENST00000642118 PTCD2Q8WV60 388 aaKnown RBP11.6□□□□□ -0.55
CASC19-281ENST00000642118 GTPBP6O43824 516 aaPredicted RBP11.58□□□□□ -0.55
CASC19-281ENST00000642118 DSG2Q14126 1118 aa11.58□□□□□ -0.55
CASC19-281ENST00000642118 LHX6Q9UPM6 363 aa11.58□□□□□ -0.56
CASC19-281ENST00000642118 DCAF8L2P0C7V8 631 aa11.57□□□□□ -0.56
CASC19-281ENST00000642118 KDM4FA0A1W2PPD8 638 aa11.54□□□□□ -0.56
CASC19-281ENST00000642118 CRISPLD2Q9H0B8 497 aa11.54□□□□□ -0.56
CASC19-281ENST00000642118 TBC1D12O60347 775 aa11.54□□□□□ -0.56
CASC19-281ENST00000642118 PSDA5PKW4 1024 aaPredicted RBP11.52□□□□□ -0.57
CASC19-281ENST00000642118 PDE4AP27815 886 aa11.52□□□□□ -0.57
CASC19-281ENST00000642118 PBX2P40425 430 aa11.51□□□□□ -0.57
CASC19-281ENST00000642118 ANKRD13DQ6ZTN6 518 aa11.49□□□□□ -0.57
CASC19-281ENST00000642118 PTGER2P43116 358 aa11.48□□□□□ -0.57
CASC19-281ENST00000642118 NCKAP5LQ9HCH0 1330 aa11.47□□□□□ -0.57
CASC19-281ENST00000642118 LSM11P83369 360 aaKnown RBP eCLIP11.47□□□□□ -0.57
CASC19-281ENST00000642118 PPP1R15BQ5SWA1 713 aa11.46□□□□□ -0.57
CASC19-281ENST00000642118 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
CASC19-281ENST00000642118 OXER1Q8TDS5 423 aa11.46□□□□□ -0.57
CASC19-281ENST00000642118 MYT1LQ9UL68 1186 aa11.45□□□□□ -0.58
CASC19-281ENST00000642118 CCDC180Q9P1Z9 1646 aa11.45□□□□□ -0.58
CASC19-281ENST00000642118 RNF166Q96A37 237 aaPredicted RBP11.44□□□□□ -0.58
CASC19-281ENST00000642118 AXIN2Q9Y2T1 843 aa11.42□□□□□ -0.58
CASC19-281ENST00000642118 ARHGAP33O14559 1287 aa11.41□□□□□ -0.58
CASC19-281ENST00000642118 LARP6Q9BRS8 491 aaKnown RBP11.41□□□□□ -0.58
CASC19-281ENST00000642118 UPF1Q92900 1129 aaKnown RBP eCLIP11.4□□□□□ -0.58
CASC19-281ENST00000642118 MFSD10Q14728 455 aa11.39□□□□□ -0.59
CASC19-281ENST00000642118 PPP4R3BQ5MIZ7 849 aa11.39□□□□□ -0.59
CASC19-281ENST00000642118 DDX27Q96GQ7 796 aaKnown RBP11.39□□□□□ -0.59
CASC19-281ENST00000642118 BBXQ8WY36 941 aaPredicted RBP11.38□□□□□ -0.59
CASC19-281ENST00000642118 ANO8Q9HCE9 1232 aaPredicted RBP11.35□□□□□ -0.59
CASC19-281ENST00000642118 TK2O00142 265 aa11.33□□□□□ -0.6
CASC19-281ENST00000642118 ADGRD1Q6QNK2 874 aa11.33□□□□□ -0.6
CASC19-281ENST00000642118 CADPS2Q86UW7 1296 aa11.33□□□□□ -0.6
CASC19-281ENST00000642118 PSEN2P49810 448 aa11.32□□□□□ -0.6
CASC19-281ENST00000642118 EVI5O60447 810 aa11.3□□□□□ -0.6
CASC19-281ENST00000642118 MAP3K9P80192 1104 aa11.3□□□□□ -0.6
CASC19-281ENST00000642118 DMRTA1Q5VZB9 504 aa11.3□□□□□ -0.6
CASC19-281ENST00000642118 ZNF454Q8N9F8 522 aa11.3□□□□□ -0.6
CASC19-281ENST00000642118 FOSBP53539 338 aa11.28□□□□□ -0.6
CASC19-281ENST00000642118 KCNH8Q96L42 1107 aa11.28□□□□□ -0.6
CASC19-281ENST00000642118 BCL2L12Q9HB09 334 aa11.27□□□□□ -0.61
CASC19-281ENST00000642118 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.61
CASC19-281ENST00000642118 HRO43593 1189 aa11.26□□□□□ -0.61
CASC19-281ENST00000642118 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
CASC19-281ENST00000642118 KCNK17Q96T54 332 aa11.25□□□□□ -0.61
CASC19-281ENST00000642118 JPH4Q96JJ6 628 aa11.24□□□□□ -0.61
CASC19-281ENST00000642118 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.24□□□□□ -0.61
CASC19-281ENST00000642118 CAMK2BQ13554 666 aa11.22□□□□□ -0.61
CASC19-281ENST00000642118 SLC4A5Q9BY07 1137 aa11.22□□□□□ -0.61
CASC19-281ENST00000642118 PTPREP23469 700 aa11.21□□□□□ -0.61
CASC19-281ENST00000642118 ZDHHC16Q969W1 377 aa11.21□□□□□ -0.61
CASC19-281ENST00000642118 STAC3Q96MF2 364 aa11.2□□□□□ -0.62
CASC19-281ENST00000642118 VPS9D1Q9Y2B5 631 aa11.2□□□□□ -0.62
CASC19-281ENST00000642118 HCSTQ9UBK5 93 aa11.18□□□□□ -0.62
CASC19-281ENST00000642118 ADAM33Q9BZ11 813 aa11.17□□□□□ -0.62
CASC19-281ENST00000642118 PCDHGA10Q9Y5H3 936 aa11.16□□□□□ -0.62
CASC19-281ENST00000642118 ZBED2Q9BTP6 218 aa11.14□□□□□ -0.63
CASC19-281ENST00000642118 PHF14O94880 888 aa11.13□□□□□ -0.63
CASC19-281ENST00000642118 BHMG1C9JSJ3 638 aaPredicted RBP11.12□□□□□ -0.63
CASC19-281ENST00000642118 TYW1BQ6NUM6 668 aa11.12□□□□□ -0.63
CASC19-281ENST00000642118 PAXIP1Q6ZW49 1069 aaPredicted RBP11.12□□□□□ -0.63
CASC19-281ENST00000642118 FBXW7Q969H0 707 aa11.12□□□□□ -0.63
CASC19-281ENST00000642118 DPYSL4O14531 572 aa11.11□□□□□ -0.63
CASC19-281ENST00000642118 CFAP44Q96MT7 982 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms