RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 RIMS1Q86UR5 1692 aaKnown RBP19.97■□□□□ 0.79
PHGDH-221ENST00000641573 EHBP1L1Q8N3D4 1523 aa19.97■□□□□ 0.79
PHGDH-221ENST00000641573 HSPA2P54652 639 aa19.96■□□□□ 0.79
PHGDH-221ENST00000641573 CERKQ8TCT0 537 aa19.95■□□□□ 0.78
PHGDH-221ENST00000641573 FRMPD1Q5SYB0 1578 aa19.95■□□□□ 0.78
PHGDH-221ENST00000641573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.94■□□□□ 0.78
PHGDH-221ENST00000641573 HNRNPUL2Q1KMD3 747 aaKnown RBP19.94■□□□□ 0.78
PHGDH-221ENST00000641573 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
PHGDH-221ENST00000641573 RRBP1Q9P2E9 1410 aaKnown RBP19.93■□□□□ 0.78
PHGDH-221ENST00000641573 ARHGEF40Q8TER5 1519 aa19.92■□□□□ 0.78
PHGDH-221ENST00000641573 POGZQ7Z3K3 1410 aa19.92■□□□□ 0.78
PHGDH-221ENST00000641573 CDK11AQ9UQ88 783 aaPredicted RBP19.9■□□□□ 0.78
PHGDH-221ENST00000641573 DISP3Q9P2K9 1392 aa19.9■□□□□ 0.78
PHGDH-221ENST00000641573 NCOA2Q15596 1464 aa19.89■□□□□ 0.77
PHGDH-221ENST00000641573 SUPT6HQ7KZ85 1726 aaKnown RBP19.89■□□□□ 0.77
PHGDH-221ENST00000641573 FANCAO15360 1455 aa19.88■□□□□ 0.77
PHGDH-221ENST00000641573 DENND4BO75064 1496 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-221ENST00000641573 CCNB3Q8WWL7 1395 aa19.88■□□□□ 0.77
PHGDH-221ENST00000641573 SOCS7O14512 581 aa19.86■□□□□ 0.77
PHGDH-221ENST00000641573 AKNAQ7Z591 1439 aa19.85■□□□□ 0.77
PHGDH-221ENST00000641573 TROQ12816 1431 aaPredicted RBP19.84■□□□□ 0.77
PHGDH-221ENST00000641573 RICTORQ6R327 1708 aa19.82■□□□□ 0.76
PHGDH-221ENST00000641573 CFAP74Q9C0B2 1584 aa19.82■□□□□ 0.76
PHGDH-221ENST00000641573 ILDR2Q71H61 639 aa19.81■□□□□ 0.76
PHGDH-221ENST00000641573 MYOM3Q5VTT5 1437 aa19.8■□□□□ 0.76
PHGDH-221ENST00000641573 PLEKHD1A6NEE1 506 aa19.8■□□□□ 0.76
PHGDH-221ENST00000641573 ZFYVE16Q7Z3T8 1539 aa19.8■□□□□ 0.76
PHGDH-221ENST00000641573 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
PHGDH-221ENST00000641573 MLECQ14165 292 aa19.79■□□□□ 0.76
PHGDH-221ENST00000641573 ZMYM4Q5VZL5 1548 aa19.77■□□□□ 0.76
PHGDH-221ENST00000641573 FAM50AQ14320 339 aaKnown RBP19.77■□□□□ 0.76
PHGDH-221ENST00000641573 FER1L4A9Z1Z3 1794 aa19.77■□□□□ 0.76
PHGDH-221ENST00000641573 TTC37Q6PGP7 1564 aa19.75■□□□□ 0.75
PHGDH-221ENST00000641573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.75■□□□□ 0.75
PHGDH-221ENST00000641573 KIF14Q15058 1648 aa19.75■□□□□ 0.75
PHGDH-221ENST00000641573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.75■□□□□ 0.756e-6■■■■■ 38.2
PHGDH-221ENST00000641573 MAGI2Q86UL8 1455 aa19.74■□□□□ 0.75
PHGDH-221ENST00000641573 DMRT2Q9Y5R5 561 aa19.74■□□□□ 0.75
PHGDH-221ENST00000641573 YEATS2Q9ULM3 1422 aa19.74■□□□□ 0.75
PHGDH-221ENST00000641573 PREX1Q8TCU6 1659 aa19.71■□□□□ 0.75
PHGDH-221ENST00000641573 SIGLEC1Q9BZZ2 1709 aa19.71■□□□□ 0.75
PHGDH-221ENST00000641573 SPATA31D1Q6ZQQ2 1576 aa19.71■□□□□ 0.75
PHGDH-221ENST00000641573 ITGAEP38570 1179 aa19.71■□□□□ 0.75
PHGDH-221ENST00000641573 MIA2Q96PC5 1412 aa19.7■□□□□ 0.74
PHGDH-221ENST00000641573 PTPN23Q9H3S7 1636 aa19.69■□□□□ 0.74
PHGDH-221ENST00000641573 TCOF1Q13428 1488 aaKnown RBP19.67■□□□□ 0.74
PHGDH-221ENST00000641573 PLCH2O75038 1416 aa19.65■□□□□ 0.74
PHGDH-221ENST00000641573 ARHGEF12Q9NZN5 1544 aa19.65■□□□□ 0.74
PHGDH-221ENST00000641573 GPATCH8Q9UKJ3 1502 aaKnown RBP19.65■□□□□ 0.74
PHGDH-221ENST00000641573 UHRF1BP1Q6BDS2 1440 aa19.64■□□□□ 0.73
PHGDH-221ENST00000641573 SCAPERQ9BY12 1400 aa19.64■□□□□ 0.73
PHGDH-221ENST00000641573 ITSN2Q9NZM3 1697 aa19.63■□□□□ 0.73
PHGDH-221ENST00000641573 ATP10AO60312 1499 aa19.63■□□□□ 0.73
PHGDH-221ENST00000641573 C9orf84Q5VXU9 1444 aa19.63■□□□□ 0.73
PHGDH-221ENST00000641573 HRCP23327 699 aa19.63■□□□□ 0.73
PHGDH-221ENST00000641573 CEBPAP49715 358 aaPredicted RBP19.62■□□□□ 0.73
PHGDH-221ENST00000641573 STRCQ7RTU9 1775 aa19.6■□□□□ 0.73
PHGDH-221ENST00000641573 CFDP1Q9UEE9 299 aaPredicted RBP19.6■□□□□ 0.73
PHGDH-221ENST00000641573 MYO5CQ9NQX4 1742 aa19.59■□□□□ 0.73
PHGDH-221ENST00000641573 CDC42BPAQ5VT25 1732 aa19.57■□□□□ 0.72
PHGDH-221ENST00000641573 ZNF644Q9H582 1327 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-221ENST00000641573 CCER1Q8TC90 406 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-221ENST00000641573 PTPRTO14522 1441 aa19.56■□□□□ 0.72
PHGDH-221ENST00000641573 PTPRKQ15262 1439 aa19.56■□□□□ 0.72
PHGDH-221ENST00000641573 CAMSAP2Q08AD1 1489 aa19.54■□□□□ 0.72
PHGDH-221ENST00000641573 EFCAB2Q5VUJ9 269 aa19.54■□□□□ 0.72
PHGDH-221ENST00000641573 MYT1LQ9UL68 1186 aa19.53■□□□□ 0.72
PHGDH-221ENST00000641573 ZNF777Q9ULD5 760 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-221ENST00000641573 SETD5Q9C0A6 1442 aa19.52■□□□□ 0.72
PHGDH-221ENST00000641573 SETD1BQ9UPS6 1966 aaKnown RBP19.52■□□□□ 0.72
PHGDH-221ENST00000641573 CDC42BPBQ9Y5S2 1711 aa19.52■□□□□ 0.72
PHGDH-221ENST00000641573 ESF1Q9H501 851 aaKnown RBP19.52■□□□□ 0.72
PHGDH-221ENST00000641573 PREX2Q70Z35 1606 aa19.51■□□□□ 0.71
PHGDH-221ENST00000641573 IQSEC2Q5JU85 1478 aa19.51■□□□□ 0.71
PHGDH-221ENST00000641573 ZNF518AQ6AHZ1 1483 aa19.51■□□□□ 0.71
PHGDH-221ENST00000641573 DAPK1P53355 1430 aa19.5■□□□□ 0.71
PHGDH-221ENST00000641573 RAB3GAP2Q9H2M9 1393 aa19.49■□□□□ 0.71
PHGDH-221ENST00000641573 DNMT1P26358 1616 aaKnown RBP19.49■□□□□ 0.71
PHGDH-221ENST00000641573 ABCC5O15440 1437 aa19.49■□□□□ 0.71
PHGDH-221ENST00000641573 ZEB1P37275 1124 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-221ENST00000641573 LTBP4Q8N2S1 1624 aa19.47■□□□□ 0.71
PHGDH-221ENST00000641573 ARHGAP5Q13017 1502 aa19.46■□□□□ 0.71
PHGDH-221ENST00000641573 CHIC2Q9UKJ5 165 aa19.46■□□□□ 0.71
PHGDH-221ENST00000641573 HFM1A2PYH4 1435 aa19.45■□□□□ 0.7
PHGDH-221ENST00000641573 C3P01024 1663 aa19.45■□□□□ 0.7
PHGDH-221ENST00000641573 KDM5CP41229 1560 aa19.44■□□□□ 0.7
PHGDH-221ENST00000641573 SAMD9LQ8IVG5 1584 aa19.44■□□□□ 0.7
PHGDH-221ENST00000641573 AFAP1Q8N556 730 aa19.43■□□□□ 0.7
PHGDH-221ENST00000641573 DIP2CQ9Y2E4 1556 aa19.43■□□□□ 0.7
PHGDH-221ENST00000641573 TRAPPC8Q9Y2L5 1435 aa19.42■□□□□ 0.7
PHGDH-221ENST00000641573 REREQ9P2R6 1566 aa19.42■□□□□ 0.7
PHGDH-221ENST00000641573 NAIPQ13075 1403 aa19.42■□□□□ 0.7
PHGDH-221ENST00000641573 NCOA1Q15788 1441 aa19.42■□□□□ 0.7
PHGDH-221ENST00000641573 RRP7BPQ9NSQ0 103 aa19.41■□□□□ 0.7
PHGDH-221ENST00000641573 ROCK1Q13464 1354 aa19.41■□□□□ 0.7
PHGDH-221ENST00000641573 ABCC1P33527 1531 aa19.41■□□□□ 0.7
PHGDH-221ENST00000641573 DHX57Q6P158 1386 aaKnown RBP19.4■□□□□ 0.7
PHGDH-221ENST00000641573 HNRNPMP52272 730 aaKnown RBP eCLIP19.39■□□□□ 0.694e-8■■■□□ 17.4
PHGDH-221ENST00000641573 PLEKHH2Q8IVE3 1493 aa19.39■□□□□ 0.69
PHGDH-221ENST00000641573 ARHGEF5Q12774 1597 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms